RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 GGT6Q6P531 493 aa30.23■■■□□ 2.43
CDC42SE2-206ENST00000503291 BCORL1Q5H9F3 1711 aa30.23■■■□□ 2.43
CDC42SE2-206ENST00000503291 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
CDC42SE2-206ENST00000503291 NUP155O75694 1391 aa30.22■■■□□ 2.43
CDC42SE2-206ENST00000503291 UNC13BO14795 1591 aa30.2■■■□□ 2.43
CDC42SE2-206ENST00000503291 DEPDC5O75140 1603 aa30.19■■■□□ 2.42
CDC42SE2-206ENST00000503291 RNF17Q9BXT8 1623 aaKnown RBP30.18■■■□□ 2.42
CDC42SE2-206ENST00000503291 MROH1Q8NDA8 1641 aa30.16■■■□□ 2.42
CDC42SE2-206ENST00000503291 MLECQ14165 292 aa30.16■■■□□ 2.42
CDC42SE2-206ENST00000503291 KANK1Q14678 1352 aa30.14■■■□□ 2.42
CDC42SE2-206ENST00000503291 PRDM15P57071 1507 aaPredicted RBP30.14■■■□□ 2.41
CDC42SE2-206ENST00000503291 MPHOSPH9Q99550 1183 aa30.13■■■□□ 2.41
CDC42SE2-206ENST00000503291 KDM5DQ9BY66 1539 aa30.13■■■□□ 2.41
CDC42SE2-206ENST00000503291 SLC4A1APQ9BWU0 796 aaKnown RBP30.12■■■□□ 2.41
CDC42SE2-206ENST00000503291 PZPP20742 1482 aa30.11■■■□□ 2.41
CDC42SE2-206ENST00000503291 FAM135AQ9P2D6 1515 aa30.1■■■□□ 2.41
CDC42SE2-206ENST00000503291 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
CDC42SE2-206ENST00000503291 WASHC2CQ9Y4E1 1318 aa30.09■■■□□ 2.41
CDC42SE2-206ENST00000503291 IQGAP3Q86VI3 1631 aa30.09■■■□□ 2.41
CDC42SE2-206ENST00000503291 VWDEQ8N2E2 1590 aa30.08■■■□□ 2.41
CDC42SE2-206ENST00000503291 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
CDC42SE2-206ENST00000503291 PKD2Q13563 968 aa30.02■■■□□ 2.4
CDC42SE2-206ENST00000503291 CCER1Q8TC90 406 aaPredicted RBP30.01■■■□□ 2.4
CDC42SE2-206ENST00000503291 ABCC3O15438 1527 aa30.01■■■□□ 2.39
CDC42SE2-206ENST00000503291 CEP152O94986 1710 aa30■■■□□ 2.39
CDC42SE2-206ENST00000503291 LMTK2Q8IWU2 1503 aa29.99■■■□□ 2.39
CDC42SE2-206ENST00000503291 FOXD1Q16676 465 aa29.98■■■□□ 2.39
CDC42SE2-206ENST00000503291 ESF1Q9H501 851 aaKnown RBP29.98■■■□□ 2.39
CDC42SE2-206ENST00000503291 TET3O43151 1660 aa29.96■■■□□ 2.39
CDC42SE2-206ENST00000503291 ZC3H13Q5T200 1668 aaKnown RBP29.96■■■□□ 2.39
CDC42SE2-206ENST00000503291 CLTCQ00610 1675 aaKnown RBP29.93■■■□□ 2.38
CDC42SE2-206ENST00000503291 EFCAB6Q5THR3 1501 aa29.91■■■□□ 2.38
CDC42SE2-206ENST00000503291 CAMSAP1Q5T5Y3 1602 aa29.91■■■□□ 2.38
CDC42SE2-206ENST00000503291 E9PCH4 1651 aa29.9■■■□□ 2.38
CDC42SE2-206ENST00000503291 CNTLNQ9NXG0 1405 aa29.89■■■□□ 2.37
CDC42SE2-206ENST00000503291 NPATQ14207 1427 aa29.88■■■□□ 2.37
CDC42SE2-206ENST00000503291 ZMYM3Q14202 1370 aa29.87■■■□□ 2.37
CDC42SE2-206ENST00000503291 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
CDC42SE2-206ENST00000503291 ARHGAP31Q2M1Z3 1444 aa29.86■■■□□ 2.37
CDC42SE2-206ENST00000503291 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
CDC42SE2-206ENST00000503291 RPRD2Q5VT52 1461 aaKnown RBP29.84■■■□□ 2.37
CDC42SE2-206ENST00000503291 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
CDC42SE2-206ENST00000503291 MADDQ8WXG6 1647 aa29.83■■■□□ 2.37
CDC42SE2-206ENST00000503291 CLSPNQ9HAW4 1339 aa29.83■■■□□ 2.37
CDC42SE2-206ENST00000503291 CFAP65Q6ZU64 1925 aaKnown RBP29.81■■■□□ 2.36
CDC42SE2-206ENST00000503291 MROH2AA6NES4 1674 aa29.8■■■□□ 2.36
CDC42SE2-206ENST00000503291 FBXO31Q5XUX0 539 aaPredicted RBP29.79■■■□□ 2.36
CDC42SE2-206ENST00000503291 PLA2R1Q13018 1463 aa29.79■■■□□ 2.36
CDC42SE2-206ENST00000503291 PTPRTO14522 1441 aa29.77■■■□□ 2.36
CDC42SE2-206ENST00000503291 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.36
CDC42SE2-206ENST00000503291 SIN3AQ96ST3 1273 aa29.76■■■□□ 2.36
CDC42SE2-206ENST00000503291 RIMS1Q86UR5 1692 aaKnown RBP29.75■■■□□ 2.35
CDC42SE2-206ENST00000503291 SPHKAPQ2M3C7 1700 aa29.74■■■□□ 2.35
CDC42SE2-206ENST00000503291 NOS1P29475 1434 aa29.73■■■□□ 2.35
CDC42SE2-206ENST00000503291 PLPPR3Q6T4P5 718 aa29.72■■■□□ 2.35
CDC42SE2-206ENST00000503291 C3P01024 1663 aa29.71■■■□□ 2.35
CDC42SE2-206ENST00000503291 NEUROD1Q13562 356 aa29.71■■■□□ 2.35
CDC42SE2-206ENST00000503291 PREX1Q8TCU6 1659 aa29.71■■■□□ 2.35
CDC42SE2-206ENST00000503291 ERVK-7P63135 1459 aa29.71■■■□□ 2.35
CDC42SE2-206ENST00000503291 TRPM2O94759 1503 aa29.7■■■□□ 2.35
CDC42SE2-206ENST00000503291 CCDC144AA2RUR9 1427 aa29.68■■■□□ 2.34
CDC42SE2-206ENST00000503291 KDM4FA0A1W2PPD8 638 aa29.68■■■□□ 2.34
CDC42SE2-206ENST00000503291 SPATA31D1Q6ZQQ2 1576 aa29.66■■■□□ 2.34
CDC42SE2-206ENST00000503291 SYNMO15061 1565 aa29.65■■■□□ 2.34
CDC42SE2-206ENST00000503291 PTPRMP28827 1452 aa29.64■■■□□ 2.34
CDC42SE2-206ENST00000503291 UGGT1Q9NYU2 1555 aa29.63■■■□□ 2.33
CDC42SE2-206ENST00000503291 SLC52A1Q9NWF4 448 aa29.62■■■□□ 2.33
CDC42SE2-206ENST00000503291 CLTCL1P53675 1640 aa29.61■■■□□ 2.33
CDC42SE2-206ENST00000503291 TNRQ92752 1358 aa29.61■■■□□ 2.33
CDC42SE2-206ENST00000503291 IDI1Q13907 227 aa29.61■■■□□ 2.33
CDC42SE2-206ENST00000503291 PIK3C2BO00750 1634 aa29.57■■■□□ 2.32
CDC42SE2-206ENST00000503291 CHGAP10645 457 aaKnown RBP29.52■■■□□ 2.32
CDC42SE2-206ENST00000503291 RGL3Q3MIN7 710 aa29.51■■■□□ 2.31
CDC42SE2-206ENST00000503291 KIF1BO60333 1816 aa29.49■■■□□ 2.31
CDC42SE2-206ENST00000503291 SPATA31E1Q6ZUB1 1445 aa29.49■■■□□ 2.31
CDC42SE2-206ENST00000503291 TONSLQ96HA7 1378 aa29.49■■■□□ 2.31
CDC42SE2-206ENST00000503291 TIMELESSQ9UNS1 1208 aa29.47■■■□□ 2.31
CDC42SE2-206ENST00000503291 NLRP1Q9C000 1473 aa29.47■■■□□ 2.31
CDC42SE2-206ENST00000503291 SETD1BQ9UPS6 1966 aaKnown RBP29.47■■■□□ 2.31
CDC42SE2-206ENST00000503291 STAG3Q9UJ98 1225 aa29.47■■■□□ 2.31
CDC42SE2-206ENST00000503291 L3MBTL2Q969R5 705 aa29.46■■■□□ 2.31
CDC42SE2-206ENST00000503291 ADGRB3O60242 1522 aa29.43■■■□□ 2.3
CDC42SE2-206ENST00000503291 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
CDC42SE2-206ENST00000503291 TMEM131LA2VDJ0 1609 aa29.43■■■□□ 2.3
CDC42SE2-206ENST00000503291 NEURL4Q96JN8 1562 aa29.42■■■□□ 2.3
CDC42SE2-206ENST00000503291 ZNF326Q5BKZ1 582 aaKnown RBP29.42■■■□□ 2.3
CDC42SE2-206ENST00000503291 MYO3AQ8NEV4 1616 aa29.41■■■□□ 2.3
CDC42SE2-206ENST00000503291 DCAF11Q8TEB1 546 aa29.38■■■□□ 2.29
CDC42SE2-206ENST00000503291 A2ML1A8K2U0 1454 aa29.38■■■□□ 2.29
CDC42SE2-206ENST00000503291 MYO5BQ9ULV0 1848 aa29.38■■■□□ 2.29
CDC42SE2-206ENST00000503291 KDM2AQ9Y2K7 1162 aa29.35■■■□□ 2.29
CDC42SE2-206ENST00000503291 UBR1Q8IWV7 1749 aa29.35■■■□□ 2.29
CDC42SE2-206ENST00000503291 KDM5AP29375 1690 aaKnown RBP29.35■■■□□ 2.29
CDC42SE2-206ENST00000503291 CEP170BQ9Y4F5 1589 aaPredicted RBP29.34■■■□□ 2.29
CDC42SE2-206ENST00000503291 UHRF1BP1Q6BDS2 1440 aa29.34■■■□□ 2.29
CDC42SE2-206ENST00000503291 RPGRIP1LQ68CZ1 1315 aa29.33■■■□□ 2.29
CDC42SE2-206ENST00000503291 PPP1R15AO75807 674 aaPredicted RBP29.32■■■□□ 2.28
CDC42SE2-206ENST00000503291 THEMISQ8N1K5 641 aaPredicted RBP29.32■■■□□ 2.28
CDC42SE2-206ENST00000503291 ZNF142P52746 1687 aaPredicted RBP29.29■■■□□ 2.28
CDC42SE2-206ENST00000503291 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms