RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 NCLP19338 710 aaKnown RBP5.31□□□□□ -1.56
SUB1-202ENST00000502453 DRC1Q96MC2 740 aa5.31□□□□□ -1.56
SUB1-202ENST00000502453 NCKAP5LQ9HCH0 1330 aa5.31□□□□□ -1.56
SUB1-202ENST00000502453 SKIV2LQ15477 1246 aaKnown RBP5.31□□□□□ -1.56
SUB1-202ENST00000502453 POLR3EQ9NVU0 708 aa5.31□□□□□ -1.56
SUB1-202ENST00000502453 MS4A1P11836 297 aa5.31□□□□□ -1.56
SUB1-202ENST00000502453 CCDC61Q9Y6R9 512 aa5.31□□□□□ -1.56
SUB1-202ENST00000502453 GDPD2Q9HCC8 539 aa5.3□□□□□ -1.56
SUB1-202ENST00000502453 MINK1Q8N4C8 1332 aaPredicted RBP5.3□□□□□ -1.56
SUB1-202ENST00000502453 PROCA1Q8NCQ7 364 aaPredicted RBP5.3□□□□□ -1.56
SUB1-202ENST00000502453 GLMNQ92990 594 aa5.3□□□□□ -1.56
SUB1-202ENST00000502453 FARP1Q9Y4F1 1045 aaPredicted RBP5.3□□□□□ -1.56
SUB1-202ENST00000502453 CANXP27824 592 aaKnown RBP5.3□□□□□ -1.56
SUB1-202ENST00000502453 GIGYF2Q6Y7W6 1299 aaKnown RBP5.3□□□□□ -1.56
SUB1-202ENST00000502453 SNRKQ9NRH2 765 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 IGSF5Q9NSI5 407 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 POM121CA8CG34 1229 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 IRF6O14896 467 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 CHRM1P11229 460 aaPredicted RBP5.29□□□□□ -1.56
SUB1-202ENST00000502453 FOSBP53539 338 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 DDX27Q96GQ7 796 aaKnown RBP5.29□□□□□ -1.56
SUB1-202ENST00000502453 CCDC136Q96JN2 1154 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 ABL2P42684 1182 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 AMHR2Q16671 573 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 CC2D2BQ6DHV5 1058 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 PBXIP1Q96AQ6 731 aa5.29□□□□□ -1.56
SUB1-202ENST00000502453 MARCH6O60337 910 aa5.28□□□□□ -1.56
SUB1-202ENST00000502453 SREK1Q8WXA9 508 aaKnown RBP5.28□□□□□ -1.56
SUB1-202ENST00000502453 PRDM16Q9HAZ2 1276 aa5.28□□□□□ -1.56
SUB1-202ENST00000502453 TCF3P15923 654 aa5.28□□□□□ -1.56
SUB1-202ENST00000502453 MAP2K5Q13163 448 aa5.28□□□□□ -1.56
SUB1-202ENST00000502453 IFNL1Q8IU54 200 aa5.28□□□□□ -1.56
SUB1-202ENST00000502453 PRKAR2AP13861 404 aaKnown RBP5.28□□□□□ -1.56
SUB1-202ENST00000502453 RBM47A0AV96 593 aaKnown RBP5.27□□□□□ -1.57
SUB1-202ENST00000502453 TRPC6Q9Y210 931 aa5.27□□□□□ -1.57
SUB1-202ENST00000502453 CDCA8Q53HL2 280 aa5.27□□□□□ -1.57
SUB1-202ENST00000502453 MAP3K13O43283 966 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 PDE4AP27815 886 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 USTQ9Y2C2 406 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 CADPSQ9ULU8 1353 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 GPR37O15354 613 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 FECHP22830 423 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 SH3D19Q5HYK7 790 aa5.26□□□□□ -1.57
SUB1-202ENST00000502453 HIRIP3Q9BW71 556 aaPredicted RBP5.26□□□□□ -1.57
SUB1-202ENST00000502453 SPDYE5A6NIY4 337 aa5.25□□□□□ -1.57
SUB1-202ENST00000502453 ZNF467Q7Z7K2 595 aaPredicted RBP5.25□□□□□ -1.57
SUB1-202ENST00000502453 VRTNQ9H8Y1 702 aa5.25□□□□□ -1.57
SUB1-202ENST00000502453 DPYSL4O14531 572 aa5.25□□□□□ -1.57
SUB1-202ENST00000502453 TSR1Q2NL82 804 aaKnown RBP5.25□□□□□ -1.57
SUB1-202ENST00000502453 ZNF662Q6ZS27 426 aa5.25□□□□□ -1.57
SUB1-202ENST00000502453 BCL2L13Q9BXK5 485 aa5.25□□□□□ -1.57
SUB1-202ENST00000502453 ANO8Q9HCE9 1232 aaPredicted RBP5.25□□□□□ -1.57
SUB1-202ENST00000502453 AAMPQ13685 434 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 WWC1Q8IX03 1113 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 GIPC2Q8TF65 315 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 REPIN1Q9BWE0 567 aaKnown RBP5.24□□□□□ -1.57
SUB1-202ENST00000502453 GRXCR2A6NFK2 248 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 EFCAB3Q8N7B9 438 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 GIMAP6Q6P9H5 292 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 SIRT1Q96EB6 747 aa5.24□□□□□ -1.57
SUB1-202ENST00000502453 ZNF16P17020 682 aaPredicted RBP5.23□□□□□ -1.57
SUB1-202ENST00000502453 LOC102724159A0A0B4J2E5 919 aa5.23□□□□□ -1.57
SUB1-202ENST00000502453 PWP2Q15269 919 aaKnown RBP5.23□□□□□ -1.57
SUB1-202ENST00000502453 MICAL1Q8TDZ2 1067 aa5.23□□□□□ -1.57
SUB1-202ENST00000502453 PHF8Q9UPP1 1060 aa5.23□□□□□ -1.57
SUB1-202ENST00000502453 PIP4P2Q8N4L2 257 aa5.23□□□□□ -1.57
SUB1-202ENST00000502453 PSEN1P49768 467 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 FXR2P51116 673 aaKnown RBP eCLIP5.22□□□□□ -1.57
SUB1-202ENST00000502453 TXNDC2Q86VQ3 553 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 TBC1D12O60347 775 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 FBXO22Q8NEZ5 403 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 PHF12Q96QT6 1004 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 CABP2Q9NPB3 220 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 MS4A4AQ96JQ5 239 aa5.22□□□□□ -1.57
SUB1-202ENST00000502453 RBM27Q9P2N5 1060 aaKnown RBP5.22□□□□□ -1.57
SUB1-202ENST00000502453 GNPATO15228 680 aa5.21□□□□□ -1.57
SUB1-202ENST00000502453 PDAP1Q13442 181 aaKnown RBP5.21□□□□□ -1.57
SUB1-202ENST00000502453 HDGFL1Q5TGJ6 251 aa5.21□□□□□ -1.57
SUB1-202ENST00000502453 UBXN4Q92575 508 aa5.21□□□□□ -1.57
SUB1-202ENST00000502453 NAALADL2Q58DX5 795 aa5.21□□□□□ -1.58
SUB1-202ENST00000502453 MYH16Q9H6N6 1097 aa5.21□□□□□ -1.58
SUB1-202ENST00000502453 RIPOR2Q9Y4F9 1068 aa5.21□□□□□ -1.58
SUB1-202ENST00000502453 KIF12Q96FN5 646 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 TBC1D2BQ9UPU7 963 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 PPME1Q9Y570 386 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 RAB11FIP3O75154 756 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 OXER1Q8TDS5 423 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 LMOD1P29536 600 aaPredicted RBP5.2□□□□□ -1.58
SUB1-202ENST00000502453 ZC3H6P61129 1189 aaKnown RBP5.2□□□□□ -1.58
SUB1-202ENST00000502453 BEGAINQ9BUH8 593 aa5.2□□□□□ -1.58
SUB1-202ENST00000502453 DNAJC2Q99543 621 aaKnown RBP5.19□□□□□ -1.58
SUB1-202ENST00000502453 PRDM10Q9NQV6 1147 aa5.19□□□□□ -1.58
SUB1-202ENST00000502453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.19□□□□□ -1.58
SUB1-202ENST00000502453 NLRP6P59044 892 aa5.19□□□□□ -1.58
SUB1-202ENST00000502453 MFSD10Q14728 455 aa5.19□□□□□ -1.58
SUB1-202ENST00000502453 MDM2Q00987 491 aaPredicted RBP5.19□□□□□ -1.58
SUB1-202ENST00000502453 GORABQ5T7V8 394 aa5.19□□□□□ -1.58
SUB1-202ENST00000502453 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.19□□□□□ -1.58
SUB1-202ENST00000502453 RFC5P40937 340 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 CAMK2BQ13554 666 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms