RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 EMILIN3Q9NT22 766 aa7.27□□□□□ -1.25
CALD1-224ENST00000498254 AXIN2Q9Y2T1 843 aa7.27□□□□□ -1.25
CALD1-224ENST00000498254 PCDHGA4Q9Y5G9 962 aa7.27□□□□□ -1.25
CALD1-224ENST00000498254 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
CALD1-224ENST00000498254 TMC2Q8TDI7 906 aa7.25□□□□□ -1.25
CALD1-224ENST00000498254 LAPTM4AQ15012 233 aa7.24□□□□□ -1.25
CALD1-224ENST00000498254 AK7Q96M32 723 aa7.23□□□□□ -1.25
CALD1-224ENST00000498254 A0A0G2JS52 829 aa7.22□□□□□ -1.25
CALD1-224ENST00000498254 PSDA5PKW4 1024 aaPredicted RBP7.22□□□□□ -1.25
CALD1-224ENST00000498254 ARHGAP33O14559 1287 aa7.22□□□□□ -1.25
CALD1-224ENST00000498254 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
CALD1-224ENST00000498254 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
CALD1-224ENST00000498254 PDIA6Q15084 440 aa7.21□□□□□ -1.26
CALD1-224ENST00000498254 ZNF787Q6DD87 383 aa7.21□□□□□ -1.26
CALD1-224ENST00000498254 ADGRD1Q6QNK2 874 aa7.21□□□□□ -1.26
CALD1-224ENST00000498254 PLPP6Q8IY26 295 aa7.21□□□□□ -1.26
CALD1-224ENST00000498254 GRXCR2A6NFK2 248 aa7.2□□□□□ -1.26
CALD1-224ENST00000498254 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
CALD1-224ENST00000498254 SPDYE16A6NNV3 312 aaPredicted RBP7.19□□□□□ -1.26
CALD1-224ENST00000498254 SUPT5HO00267 1087 aaKnown RBP7.19□□□□□ -1.26
CALD1-224ENST00000498254 FOXK1P85037 733 aa7.19□□□□□ -1.26
CALD1-224ENST00000498254 UPF1Q92900 1129 aaKnown RBP eCLIP7.19□□□□□ -1.26
CALD1-224ENST00000498254 KDM4FA0A1W2PPD8 638 aa7.18□□□□□ -1.26
CALD1-224ENST00000498254 TK2O00142 265 aa7.18□□□□□ -1.26
CALD1-224ENST00000498254 TRIM66O15016 1216 aa7.18□□□□□ -1.26
CALD1-224ENST00000498254 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
CALD1-224ENST00000498254 NUTM2FA1L443 756 aa7.17□□□□□ -1.26
CALD1-224ENST00000498254 MAP3K9P80192 1104 aa7.17□□□□□ -1.26
CALD1-224ENST00000498254 PTCD2Q8WV60 388 aaKnown RBP7.17□□□□□ -1.26
CALD1-224ENST00000498254 PDE4DQ08499 809 aa7.16□□□□□ -1.26
CALD1-224ENST00000498254 GPR37O15354 613 aa7.15□□□□□ -1.26
CALD1-224ENST00000498254 HRO43593 1189 aa7.15□□□□□ -1.26
CALD1-224ENST00000498254 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
CALD1-224ENST00000498254 PSEN2P49810 448 aa7.14□□□□□ -1.27
CALD1-224ENST00000498254 ARXQ96QS3 562 aa7.14□□□□□ -1.27
CALD1-224ENST00000498254 DDX12PQ92771 950 aa7.13□□□□□ -1.27
CALD1-224ENST00000498254 LCE2BO14633 110 aa7.12□□□□□ -1.27
CALD1-224ENST00000498254 PPP4R3BQ5MIZ7 849 aa7.12□□□□□ -1.27
CALD1-224ENST00000498254 CCDC102AQ96A19 550 aa7.12□□□□□ -1.27
CALD1-224ENST00000498254 STAC3Q96MF2 364 aa7.12□□□□□ -1.27
CALD1-224ENST00000498254 TBC1D12O60347 775 aa7.11□□□□□ -1.27
CALD1-224ENST00000498254 KCTD12Q96CX2 325 aaKnown RBP7.11□□□□□ -1.27
CALD1-224ENST00000498254 FAM117AQ9C073 453 aa7.1□□□□□ -1.27
CALD1-224ENST00000498254 OSBPP22059 807 aa7.09□□□□□ -1.27
CALD1-224ENST00000498254 FECHP22830 423 aa7.09□□□□□ -1.27
CALD1-224ENST00000498254 MINK1Q8N4C8 1332 aaPredicted RBP7.08□□□□□ -1.28
CALD1-224ENST00000498254 MAP2K5Q13163 448 aa7.08□□□□□ -1.28
CALD1-224ENST00000498254 HOMEZQ8IX15 550 aa7.08□□□□□ -1.28
CALD1-224ENST00000498254 KCNH8Q96L42 1107 aa7.08□□□□□ -1.28
CALD1-224ENST00000498254 GNPATO15228 680 aa7.07□□□□□ -1.28
CALD1-224ENST00000498254 PRIM1P49642 420 aaKnown RBP7.07□□□□□ -1.28
CALD1-224ENST00000498254 KCNK17Q96T54 332 aa7.07□□□□□ -1.28
CALD1-224ENST00000498254 IRF6O14896 467 aa7.06□□□□□ -1.28
CALD1-224ENST00000498254 EVI5O60447 810 aa7.06□□□□□ -1.28
CALD1-224ENST00000498254 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
CALD1-224ENST00000498254 STK17AQ9UEE5 414 aa7.06□□□□□ -1.28
CALD1-224ENST00000498254 DAXXQ9UER7 740 aaPredicted RBP7.06□□□□□ -1.28
CALD1-224ENST00000498254 FCHSD2O94868 740 aa7.05□□□□□ -1.28
CALD1-224ENST00000498254 TTLL12Q14166 644 aaPredicted RBP7.05□□□□□ -1.28
CALD1-224ENST00000498254 SUZ12Q15022 739 aaKnown RBP7.05□□□□□ -1.28
CALD1-224ENST00000498254 PARP9Q8IXQ6 854 aa7.05□□□□□ -1.28
CALD1-224ENST00000498254 VPS9D1Q9Y2B5 631 aa7.05□□□□□ -1.28
CALD1-224ENST00000498254 PTPN5P54829 565 aa7.04□□□□□ -1.28
CALD1-224ENST00000498254 HIC1Q14526 733 aa7.04□□□□□ -1.28
CALD1-224ENST00000498254 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
CALD1-224ENST00000498254 GFRA3O60609 400 aa7.02□□□□□ -1.29
CALD1-224ENST00000498254 AMHR2Q16671 573 aa7.02□□□□□ -1.29
CALD1-224ENST00000498254 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.29
CALD1-224ENST00000498254 CDHR5Q9HBB8 845 aa7.02□□□□□ -1.29
CALD1-224ENST00000498254 RBM33Q96EV2 1170 aaKnown RBP7.01□□□□□ -1.29
CALD1-224ENST00000498254 DDRGK1Q96HY6 314 aa7.01□□□□□ -1.29
CALD1-224ENST00000498254 BCL2L12Q9HB09 334 aa7.01□□□□□ -1.29
CALD1-224ENST00000498254 PTGDRQ13258 359 aa7□□□□□ -1.29
CALD1-224ENST00000498254 ZNF454Q8N9F8 522 aa7□□□□□ -1.29
CALD1-224ENST00000498254 ZMYND15Q9H091 742 aa7□□□□□ -1.29
CALD1-224ENST00000498254 BHMG1C9JSJ3 638 aaPredicted RBP6.99□□□□□ -1.29
CALD1-224ENST00000498254 MAP3K7O43318 606 aa6.98□□□□□ -1.29
CALD1-224ENST00000498254 GIGYF2Q6Y7W6 1299 aaKnown RBP6.98□□□□□ -1.29
CALD1-224ENST00000498254 THSD4Q6ZMP0 1018 aa6.98□□□□□ -1.29
CALD1-224ENST00000498254 ARID3AQ99856 593 aa6.98□□□□□ -1.29
CALD1-224ENST00000498254 GOLGA8CPA6NN73 597 aa6.97□□□□□ -1.29
CALD1-224ENST00000498254 MS4A1P11836 297 aa6.97□□□□□ -1.29
CALD1-224ENST00000498254 PTPREP23469 700 aa6.97□□□□□ -1.29
CALD1-224ENST00000498254 FOSBP53539 338 aa6.97□□□□□ -1.29
CALD1-224ENST00000498254 REPIN1Q9BWE0 567 aaKnown RBP6.97□□□□□ -1.29
CALD1-224ENST00000498254 RSPH6AQ9H0K4 717 aa6.97□□□□□ -1.29
CALD1-224ENST00000498254 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
CALD1-224ENST00000498254 WNT2BQ93097 391 aa6.96□□□□□ -1.3
CALD1-224ENST00000498254 ZBED2Q9BTP6 218 aa6.96□□□□□ -1.3
CALD1-224ENST00000498254 MDM2Q00987 491 aaPredicted RBP6.95□□□□□ -1.3
CALD1-224ENST00000498254 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
CALD1-224ENST00000498254 MRPL50Q8N5N7 158 aaKnown RBP6.95□□□□□ -1.3
CALD1-224ENST00000498254 ANO8Q9HCE9 1232 aaPredicted RBP6.95□□□□□ -1.3
CALD1-224ENST00000498254 FAM161AQ3B820 660 aa6.94□□□□□ -1.3
CALD1-224ENST00000498254 NLRP7Q8WX94 980 aa6.94□□□□□ -1.3
CALD1-224ENST00000498254 NPDC1Q9NQX5 325 aaPredicted RBP6.94□□□□□ -1.3
CALD1-224ENST00000498254 ATP1B4Q9UN42 357 aaPredicted RBP6.94□□□□□ -1.3
CALD1-224ENST00000498254 ARID3CA6NKF2 412 aa6.93□□□□□ -1.3
CALD1-224ENST00000498254 PHF14O94880 888 aa6.93□□□□□ -1.3
CALD1-224ENST00000498254 JPH4Q96JJ6 628 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms