RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
MRPL55-234ENST00000497758 WASHC2CQ9Y4E1 1318 aa17.89■□□□□ 0.45
MRPL55-234ENST00000497758 CLTCQ00610 1675 aaKnown RBP17.89■□□□□ 0.45
MRPL55-234ENST00000497758 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
MRPL55-234ENST00000497758 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
MRPL55-234ENST00000497758 MROH2AA6NES4 1674 aa17.88■□□□□ 0.45
MRPL55-234ENST00000497758 KDM5DQ9BY66 1539 aa17.88■□□□□ 0.45
MRPL55-234ENST00000497758 FAM135AQ9P2D6 1515 aa17.88■□□□□ 0.45
MRPL55-234ENST00000497758 C3P01024 1663 aa17.87■□□□□ 0.45
MRPL55-234ENST00000497758 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
MRPL55-234ENST00000497758 PTPRKQ15262 1439 aa17.86■□□□□ 0.45
MRPL55-234ENST00000497758 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-234ENST00000497758 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
MRPL55-234ENST00000497758 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
MRPL55-234ENST00000497758 NPATQ14207 1427 aa17.83■□□□□ 0.45
MRPL55-234ENST00000497758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
MRPL55-234ENST00000497758 UHRF1BP1Q6BDS2 1440 aa17.82■□□□□ 0.44
MRPL55-234ENST00000497758 ANKRD50Q9ULJ7 1429 aa17.82■□□□□ 0.44
MRPL55-234ENST00000497758 KANK1Q14678 1352 aa17.82■□□□□ 0.44
MRPL55-234ENST00000497758 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
MRPL55-234ENST00000497758 ABCC3O15438 1527 aa17.8■□□□□ 0.44
MRPL55-234ENST00000497758 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
MRPL55-234ENST00000497758 MROH1Q8NDA8 1641 aa17.8■□□□□ 0.44
MRPL55-234ENST00000497758 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-234ENST00000497758 ZC3H13Q5T200 1668 aaKnown RBP17.79■□□□□ 0.44
MRPL55-234ENST00000497758 PZPP20742 1482 aa17.78■□□□□ 0.44
MRPL55-234ENST00000497758 HSPA2P54652 639 aa17.78■□□□□ 0.44
MRPL55-234ENST00000497758 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
MRPL55-234ENST00000497758 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-234ENST00000497758 CEP152O94986 1710 aa17.74■□□□□ 0.43
MRPL55-234ENST00000497758 TNRQ92752 1358 aa17.74■□□□□ 0.43
MRPL55-234ENST00000497758 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
MRPL55-234ENST00000497758 MYO3AQ8NEV4 1616 aa17.71■□□□□ 0.43
MRPL55-234ENST00000497758 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
MRPL55-234ENST00000497758 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
MRPL55-234ENST00000497758 VWDEQ8N2E2 1590 aa17.69■□□□□ 0.42
MRPL55-234ENST00000497758 ERVK-7P63135 1459 aa17.68■□□□□ 0.42
MRPL55-234ENST00000497758 UNC13BO14795 1591 aa17.67■□□□□ 0.42
MRPL55-234ENST00000497758 CEP170BQ9Y4F5 1589 aaPredicted RBP17.67■□□□□ 0.42
MRPL55-234ENST00000497758 HFM1A2PYH4 1435 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 NAIPQ13075 1403 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 A2ML1A8K2U0 1454 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 NLRP1Q9C000 1473 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 SPATA31D1Q6ZQQ2 1576 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 NUP155O75694 1391 aa17.66■□□□□ 0.42
MRPL55-234ENST00000497758 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-234ENST00000497758 EFCAB6Q5THR3 1501 aa17.65■□□□□ 0.42
MRPL55-234ENST00000497758 GCC2Q8IWJ2 1684 aa17.63■□□□□ 0.41
MRPL55-234ENST00000497758 CFAP65Q6ZU64 1925 aaKnown RBP17.62■□□□□ 0.41
MRPL55-234ENST00000497758 TET3O43151 1660 aa17.61■□□□□ 0.41
MRPL55-234ENST00000497758 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
MRPL55-234ENST00000497758 RPRD2Q5VT52 1461 aaKnown RBP17.61■□□□□ 0.41
MRPL55-234ENST00000497758 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
MRPL55-234ENST00000497758 THEMISQ8N1K5 641 aaPredicted RBP17.6■□□□□ 0.41
MRPL55-234ENST00000497758 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
MRPL55-234ENST00000497758 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
MRPL55-234ENST00000497758 PLA2R1Q13018 1463 aa17.58■□□□□ 0.41
MRPL55-234ENST00000497758 PKD2Q13563 968 aa17.57■□□□□ 0.4
MRPL55-234ENST00000497758 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
MRPL55-234ENST00000497758 NOS1P29475 1434 aa17.56■□□□□ 0.4
MRPL55-234ENST00000497758 STRCQ7RTU9 1775 aa17.56■□□□□ 0.4
MRPL55-234ENST00000497758 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
MRPL55-234ENST00000497758 SLC52A1Q9NWF4 448 aa17.54■□□□□ 0.4
MRPL55-234ENST00000497758 SYNMO15061 1565 aa17.53■□□□□ 0.4
MRPL55-234ENST00000497758 ANKLE2Q86XL3 938 aa17.53■□□□□ 0.4
MRPL55-234ENST00000497758 PTPRTO14522 1441 aa17.53■□□□□ 0.4
MRPL55-234ENST00000497758 E9PCH4 1651 aa17.52■□□□□ 0.4
MRPL55-234ENST00000497758 IDI1Q13907 227 aa17.52■□□□□ 0.4
MRPL55-234ENST00000497758 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
MRPL55-234ENST00000497758 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
MRPL55-234ENST00000497758 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
MRPL55-234ENST00000497758 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
MRPL55-234ENST00000497758 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
MRPL55-234ENST00000497758 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
MRPL55-234ENST00000497758 ADGRB3O60242 1522 aa17.47■□□□□ 0.39
MRPL55-234ENST00000497758 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
MRPL55-234ENST00000497758 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
MRPL55-234ENST00000497758 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
MRPL55-234ENST00000497758 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
MRPL55-234ENST00000497758 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
MRPL55-234ENST00000497758 RAB3GAP2Q9H2M9 1393 aa17.44■□□□□ 0.38
MRPL55-234ENST00000497758 SLIT1O75093 1534 aa17.44■□□□□ 0.38
MRPL55-234ENST00000497758 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
MRPL55-234ENST00000497758 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
MRPL55-234ENST00000497758 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
MRPL55-234ENST00000497758 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
MRPL55-234ENST00000497758 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
MRPL55-234ENST00000497758 LTKP29376 864 aa17.41■□□□□ 0.38
MRPL55-234ENST00000497758 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
MRPL55-234ENST00000497758 MED14O60244 1454 aa17.41■□□□□ 0.38
MRPL55-234ENST00000497758 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
MRPL55-234ENST00000497758 TRPM2O94759 1503 aa17.4■□□□□ 0.38
MRPL55-234ENST00000497758 TMEM131LA2VDJ0 1609 aa17.39■□□□□ 0.37
MRPL55-234ENST00000497758 IQGAP1P46940 1657 aa17.39■□□□□ 0.37
MRPL55-234ENST00000497758 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-234ENST00000497758 FOXD1Q16676 465 aa17.38■□□□□ 0.37
MRPL55-234ENST00000497758 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
MRPL55-234ENST00000497758 ZNF335Q9H4Z2 1342 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-234ENST00000497758 CERKQ8TCT0 537 aa17.37■□□□□ 0.37
MRPL55-234ENST00000497758 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms