RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 PPP6R1Q9UPN7 881 aa30.76■■■□□ 2.51
COL9A2-210ENST00000495948 KIF3BO15066 747 aa30.75■■■□□ 2.51
COL9A2-210ENST00000495948 GGT6Q6P531 493 aa30.74■■■□□ 2.51
COL9A2-210ENST00000495948 MROH1Q8NDA8 1641 aa30.73■■■□□ 2.51
COL9A2-210ENST00000495948 PTPRKQ15262 1439 aa30.73■■■□□ 2.51
COL9A2-210ENST00000495948 ZC3H13Q5T200 1668 aaKnown RBP30.72■■■□□ 2.51
COL9A2-210ENST00000495948 PRDM15P57071 1507 aaPredicted RBP30.71■■■□□ 2.51
COL9A2-210ENST00000495948 DEPDC5O75140 1603 aa30.7■■■□□ 2.51
COL9A2-210ENST00000495948 CHIC2Q9UKJ5 165 aa30.7■■■□□ 2.51
COL9A2-210ENST00000495948 RRP7BPQ9NSQ0 103 aa30.69■■■□□ 2.5
COL9A2-210ENST00000495948 ROCK1Q13464 1354 aa30.68■■■□□ 2.5
COL9A2-210ENST00000495948 PREX1Q8TCU6 1659 aa30.68■■■□□ 2.5
COL9A2-210ENST00000495948 LMTK3Q96Q04 1460 aa30.67■■■□□ 2.5
COL9A2-210ENST00000495948 ZMYM3Q14202 1370 aa30.65■■■□□ 2.5
COL9A2-210ENST00000495948 NPATQ14207 1427 aa30.64■■■□□ 2.5
COL9A2-210ENST00000495948 ABCC3O15438 1527 aa30.64■■■□□ 2.5
COL9A2-210ENST00000495948 CEBPAP49715 358 aaPredicted RBP30.63■■■□□ 2.49
COL9A2-210ENST00000495948 PLPPR3Q6T4P5 718 aa30.63■■■□□ 2.49
COL9A2-210ENST00000495948 ANKRD50Q9ULJ7 1429 aa30.6■■■□□ 2.49
COL9A2-210ENST00000495948 PZPP20742 1482 aa30.58■■■□□ 2.49
COL9A2-210ENST00000495948 WASHC2CQ9Y4E1 1318 aa30.57■■■□□ 2.48
COL9A2-210ENST00000495948 CEP152O94986 1710 aa30.57■■■□□ 2.48
COL9A2-210ENST00000495948 VWDEQ8N2E2 1590 aa30.56■■■□□ 2.48
COL9A2-210ENST00000495948 UHRF1BP1Q6BDS2 1440 aa30.56■■■□□ 2.48
COL9A2-210ENST00000495948 SETD1BQ9UPS6 1966 aaKnown RBP30.55■■■□□ 2.48
COL9A2-210ENST00000495948 CAMSAP1Q5T5Y3 1602 aa30.55■■■□□ 2.48
COL9A2-210ENST00000495948 MYO3AQ8NEV4 1616 aa30.52■■■□□ 2.48
COL9A2-210ENST00000495948 UNC13BO14795 1591 aa30.52■■■□□ 2.48
COL9A2-210ENST00000495948 ITGAEP38570 1179 aa30.51■■■□□ 2.47
COL9A2-210ENST00000495948 LMTK2Q8IWU2 1503 aa30.51■■■□□ 2.47
COL9A2-210ENST00000495948 ZNF142P52746 1687 aaPredicted RBP30.5■■■□□ 2.47
COL9A2-210ENST00000495948 KANK1Q14678 1352 aa30.49■■■□□ 2.47
COL9A2-210ENST00000495948 GCC2Q8IWJ2 1684 aa30.49■■■□□ 2.47
COL9A2-210ENST00000495948 ARHGAP31Q2M1Z3 1444 aa30.45■■■□□ 2.46
COL9A2-210ENST00000495948 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.46
COL9A2-210ENST00000495948 CEP170BQ9Y4F5 1589 aaPredicted RBP30.42■■■□□ 2.46
COL9A2-210ENST00000495948 EFCAB6Q5THR3 1501 aa30.42■■■□□ 2.46
COL9A2-210ENST00000495948 ERVK-7P63135 1459 aa30.41■■■□□ 2.46
COL9A2-210ENST00000495948 TNRQ92752 1358 aa30.4■■■□□ 2.46
COL9A2-210ENST00000495948 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
COL9A2-210ENST00000495948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.39■■■□□ 2.46
COL9A2-210ENST00000495948 NAIPQ13075 1403 aa30.39■■■□□ 2.45
COL9A2-210ENST00000495948 IQGAP3Q86VI3 1631 aa30.37■■■□□ 2.45
COL9A2-210ENST00000495948 TET3O43151 1660 aa30.37■■■□□ 2.45
COL9A2-210ENST00000495948 A2ML1A8K2U0 1454 aa30.35■■■□□ 2.45
COL9A2-210ENST00000495948 NLRP1Q9C000 1473 aa30.35■■■□□ 2.45
COL9A2-210ENST00000495948 HSPA2P54652 639 aa30.34■■■□□ 2.45
COL9A2-210ENST00000495948 FBXO31Q5XUX0 539 aaPredicted RBP30.34■■■□□ 2.45
COL9A2-210ENST00000495948 RPRD2Q5VT52 1461 aaKnown RBP30.31■■■□□ 2.44
COL9A2-210ENST00000495948 PLA2R1Q13018 1463 aa30.26■■■□□ 2.44
COL9A2-210ENST00000495948 STRCQ7RTU9 1775 aa30.24■■■□□ 2.43
COL9A2-210ENST00000495948 NUP155O75694 1391 aa30.23■■■□□ 2.43
COL9A2-210ENST00000495948 NOS1P29475 1434 aa30.22■■■□□ 2.43
COL9A2-210ENST00000495948 SYNMO15061 1565 aa30.22■■■□□ 2.43
COL9A2-210ENST00000495948 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
COL9A2-210ENST00000495948 E9PCH4 1651 aa30.22■■■□□ 2.43
COL9A2-210ENST00000495948 CFAP65Q6ZU64 1925 aaKnown RBP30.2■■■□□ 2.42
COL9A2-210ENST00000495948 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
COL9A2-210ENST00000495948 KDM5AP29375 1690 aaKnown RBP30.15■■■□□ 2.42
COL9A2-210ENST00000495948 PIK3C2BO00750 1634 aa30.13■■■□□ 2.41
COL9A2-210ENST00000495948 POLR1AO95602 1720 aaPredicted RBP30.12■■■□□ 2.41
COL9A2-210ENST00000495948 PTPRTO14522 1441 aa30.1■■■□□ 2.41
COL9A2-210ENST00000495948 ADGRB3O60242 1522 aa30.08■■■□□ 2.41
COL9A2-210ENST00000495948 SPHKAPQ2M3C7 1700 aa30.06■■■□□ 2.4
COL9A2-210ENST00000495948 THEMISQ8N1K5 641 aaPredicted RBP30.06■■■□□ 2.4
COL9A2-210ENST00000495948 DMRT2Q9Y5R5 561 aa30.06■■■□□ 2.4
COL9A2-210ENST00000495948 NEURL4Q96JN8 1562 aa30.06■■■□□ 2.4
COL9A2-210ENST00000495948 PKD2Q13563 968 aa30.05■■■□□ 2.4
COL9A2-210ENST00000495948 SETD5Q9C0A6 1442 aa30.05■■■□□ 2.4
COL9A2-210ENST00000495948 SLIT1O75093 1534 aa30.04■■■□□ 2.4
COL9A2-210ENST00000495948 ARHGAP23Q9P227 1491 aa30.02■■■□□ 2.4
COL9A2-210ENST00000495948 SLC52A1Q9NWF4 448 aa30.02■■■□□ 2.4
COL9A2-210ENST00000495948 ACIN1Q9UKV3 1341 aaKnown RBP29.99■■■□□ 2.39
COL9A2-210ENST00000495948 IDI1Q13907 227 aa29.99■■■□□ 2.39
COL9A2-210ENST00000495948 NCKAP5LQ9HCH0 1330 aa29.98■■■□□ 2.39
COL9A2-210ENST00000495948 TRPM2O94759 1503 aa29.98■■■□□ 2.39
COL9A2-210ENST00000495948 TRIM52Q96A61 297 aa29.98■■■□□ 2.39
COL9A2-210ENST00000495948 MED14O60244 1454 aa29.98■■■□□ 2.39
COL9A2-210ENST00000495948 TMEM131LA2VDJ0 1609 aa29.96■■■□□ 2.39
COL9A2-210ENST00000495948 RAB3GAP2Q9H2M9 1393 aa29.95■■■□□ 2.39
COL9A2-210ENST00000495948 SCAF11Q99590 1463 aaKnown RBP29.94■■■□□ 2.38
COL9A2-210ENST00000495948 TMEM2Q9UHN6 1383 aa29.93■■■□□ 2.38
COL9A2-210ENST00000495948 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
COL9A2-210ENST00000495948 IQGAP1P46940 1657 aa29.92■■■□□ 2.38
COL9A2-210ENST00000495948 SLC4A1APQ9BWU0 796 aaKnown RBP29.91■■■□□ 2.38
COL9A2-210ENST00000495948 STAG3Q9UJ98 1225 aa29.91■■■□□ 2.38
COL9A2-210ENST00000495948 NPHP4O75161 1426 aaPredicted RBP29.9■■■□□ 2.38
COL9A2-210ENST00000495948 MYO5BQ9ULV0 1848 aa29.89■■■□□ 2.38
COL9A2-210ENST00000495948 CLTCL1P53675 1640 aa29.89■■■□□ 2.38
COL9A2-210ENST00000495948 ZFYVE9O95405 1425 aa29.85■■■□□ 2.37
COL9A2-210ENST00000495948 LTBP4Q8N2S1 1624 aa29.82■■■□□ 2.36
COL9A2-210ENST00000495948 EID1Q9Y6B2 187 aa29.81■■■□□ 2.36
COL9A2-210ENST00000495948 LTKP29376 864 aa29.8■■■□□ 2.36
COL9A2-210ENST00000495948 MPHOSPH9Q99550 1183 aa29.8■■■□□ 2.36
COL9A2-210ENST00000495948 HRCP23327 699 aa29.79■■■□□ 2.36
COL9A2-210ENST00000495948 RIMS2Q9UQ26 1411 aa29.79■■■□□ 2.36
COL9A2-210ENST00000495948 TXNDC2Q86VQ3 553 aa29.78■■■□□ 2.36
COL9A2-210ENST00000495948 KIF1BO60333 1816 aa29.77■■■□□ 2.36
COL9A2-210ENST00000495948 CHGAP10645 457 aaKnown RBP29.73■■■□□ 2.35
COL9A2-210ENST00000495948 ZNF335Q9H4Z2 1342 aaPredicted RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms