RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
LMO4-204ENST00000495705 FAM135AQ9P2D6 1515 aa30.47■■■□□ 2.47
LMO4-204ENST00000495705 GGT6Q6P531 493 aa30.47■■■□□ 2.47
LMO4-204ENST00000495705 PPP6R1Q9UPN7 881 aa30.47■■■□□ 2.47
LMO4-204ENST00000495705 MROH2AA6NES4 1674 aa30.45■■■□□ 2.46
LMO4-204ENST00000495705 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
LMO4-204ENST00000495705 ANKRD50Q9ULJ7 1429 aa30.4■■■□□ 2.46
LMO4-204ENST00000495705 KDM5DQ9BY66 1539 aa30.4■■■□□ 2.46
LMO4-204ENST00000495705 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
LMO4-204ENST00000495705 MROH1Q8NDA8 1641 aa30.39■■■□□ 2.46
LMO4-204ENST00000495705 PRDM15P57071 1507 aaPredicted RBP30.37■■■□□ 2.45
LMO4-204ENST00000495705 C3P01024 1663 aa30.37■■■□□ 2.45
LMO4-204ENST00000495705 ZC3H13Q5T200 1668 aaKnown RBP30.37■■■□□ 2.45
LMO4-204ENST00000495705 GCC2Q8IWJ2 1684 aa30.32■■■□□ 2.44
LMO4-204ENST00000495705 WASHC2CQ9Y4E1 1318 aa30.31■■■□□ 2.44
LMO4-204ENST00000495705 ZMYM3Q14202 1370 aa30.3■■■□□ 2.44
LMO4-204ENST00000495705 ABCC3O15438 1527 aa30.3■■■□□ 2.44
LMO4-204ENST00000495705 KANK1Q14678 1352 aa30.28■■■□□ 2.44
LMO4-204ENST00000495705 CEP152O94986 1710 aa30.27■■■□□ 2.44
LMO4-204ENST00000495705 PLPPR3Q6T4P5 718 aa30.27■■■□□ 2.44
LMO4-204ENST00000495705 HFM1A2PYH4 1435 aa30.26■■■□□ 2.43
LMO4-204ENST00000495705 UNC13BO14795 1591 aa30.26■■■□□ 2.43
LMO4-204ENST00000495705 CEBPAP49715 358 aaPredicted RBP30.26■■■□□ 2.43
LMO4-204ENST00000495705 NAIPQ13075 1403 aa30.25■■■□□ 2.43
LMO4-204ENST00000495705 VWDEQ8N2E2 1590 aa30.24■■■□□ 2.43
LMO4-204ENST00000495705 CAMSAP1Q5T5Y3 1602 aa30.23■■■□□ 2.43
LMO4-204ENST00000495705 NPATQ14207 1427 aa30.22■■■□□ 2.43
LMO4-204ENST00000495705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.43
LMO4-204ENST00000495705 SETD1BQ9UPS6 1966 aaKnown RBP30.22■■■□□ 2.43
LMO4-204ENST00000495705 PZPP20742 1482 aa30.21■■■□□ 2.43
LMO4-204ENST00000495705 LMTK2Q8IWU2 1503 aa30.21■■■□□ 2.43
LMO4-204ENST00000495705 PREX1Q8TCU6 1659 aa30.2■■■□□ 2.42
LMO4-204ENST00000495705 IQGAP3Q86VI3 1631 aa30.14■■■□□ 2.41
LMO4-204ENST00000495705 ARHGAP31Q2M1Z3 1444 aa30.13■■■□□ 2.41
LMO4-204ENST00000495705 TET3O43151 1660 aa30.11■■■□□ 2.41
LMO4-204ENST00000495705 UHRF1BP1Q6BDS2 1440 aa30.11■■■□□ 2.41
LMO4-204ENST00000495705 EFCAB6Q5THR3 1501 aa30.11■■■□□ 2.41
LMO4-204ENST00000495705 LMTK3Q96Q04 1460 aa30.1■■■□□ 2.41
LMO4-204ENST00000495705 MYO3AQ8NEV4 1616 aa30.07■■■□□ 2.4
LMO4-204ENST00000495705 SPATA31D1Q6ZQQ2 1576 aa30.07■■■□□ 2.4
LMO4-204ENST00000495705 NUP155O75694 1391 aa30.07■■■□□ 2.4
LMO4-204ENST00000495705 ERVK-7P63135 1459 aa30.06■■■□□ 2.4
LMO4-204ENST00000495705 TNRQ92752 1358 aa30.04■■■□□ 2.4
LMO4-204ENST00000495705 FBXO31Q5XUX0 539 aaPredicted RBP30.04■■■□□ 2.4
LMO4-204ENST00000495705 CFAP65Q6ZU64 1925 aaKnown RBP30.04■■■□□ 2.4
LMO4-204ENST00000495705 RPRD2Q5VT52 1461 aaKnown RBP30.03■■■□□ 2.4
LMO4-204ENST00000495705 ZNF142P52746 1687 aaPredicted RBP30.03■■■□□ 2.4
LMO4-204ENST00000495705 SETD5Q9C0A6 1442 aa30.01■■■□□ 2.39
LMO4-204ENST00000495705 CEP170BQ9Y4F5 1589 aaPredicted RBP29.98■■■□□ 2.39
LMO4-204ENST00000495705 E9PCH4 1651 aa29.98■■■□□ 2.39
LMO4-204ENST00000495705 ACIN1Q9UKV3 1341 aaKnown RBP29.97■■■□□ 2.39
LMO4-204ENST00000495705 NLRP1Q9C000 1473 aa29.97■■■□□ 2.39
LMO4-204ENST00000495705 A2ML1A8K2U0 1454 aa29.94■■■□□ 2.38
LMO4-204ENST00000495705 TRIM52Q96A61 297 aa29.94■■■□□ 2.38
LMO4-204ENST00000495705 NOS1P29475 1434 aa29.92■■■□□ 2.38
LMO4-204ENST00000495705 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
LMO4-204ENST00000495705 SYNMO15061 1565 aa29.89■■■□□ 2.38
LMO4-204ENST00000495705 HSPA2P54652 639 aa29.88■■■□□ 2.37
LMO4-204ENST00000495705 UGGT1Q9NYU2 1555 aa29.85■■■□□ 2.37
LMO4-204ENST00000495705 SLC4A1APQ9BWU0 796 aaKnown RBP29.83■■■□□ 2.37
LMO4-204ENST00000495705 SPHKAPQ2M3C7 1700 aa29.82■■■□□ 2.36
LMO4-204ENST00000495705 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
LMO4-204ENST00000495705 HRCP23327 699 aa29.81■■■□□ 2.36
LMO4-204ENST00000495705 PIK3C2BO00750 1634 aa29.81■■■□□ 2.36
LMO4-204ENST00000495705 PLA2R1Q13018 1463 aa29.8■■■□□ 2.36
LMO4-204ENST00000495705 UBR1Q8IWV7 1749 aa29.8■■■□□ 2.36
LMO4-204ENST00000495705 KDM5AP29375 1690 aaKnown RBP29.8■■■□□ 2.36
LMO4-204ENST00000495705 SLC52A1Q9NWF4 448 aa29.8■■■□□ 2.36
LMO4-204ENST00000495705 PKD2Q13563 968 aa29.77■■■□□ 2.36
LMO4-204ENST00000495705 PTPRTO14522 1441 aa29.77■■■□□ 2.36
LMO4-204ENST00000495705 THEMISQ8N1K5 641 aaPredicted RBP29.76■■■□□ 2.35
LMO4-204ENST00000495705 STRCQ7RTU9 1775 aa29.75■■■□□ 2.35
LMO4-204ENST00000495705 IDI1Q13907 227 aa29.74■■■□□ 2.35
LMO4-204ENST00000495705 ADGRB3O60242 1522 aa29.74■■■□□ 2.35
LMO4-204ENST00000495705 TRPM2O94759 1503 aa29.74■■■□□ 2.35
LMO4-204ENST00000495705 MPHOSPH9Q99550 1183 aa29.73■■■□□ 2.35
LMO4-204ENST00000495705 STAG3Q9UJ98 1225 aa29.7■■■□□ 2.35
LMO4-204ENST00000495705 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
LMO4-204ENST00000495705 TMEM131LA2VDJ0 1609 aa29.66■■■□□ 2.34
LMO4-204ENST00000495705 SLIT1O75093 1534 aa29.66■■■□□ 2.34
LMO4-204ENST00000495705 CLTCL1P53675 1640 aa29.64■■■□□ 2.34
LMO4-204ENST00000495705 ARHGAP23Q9P227 1491 aa29.64■■■□□ 2.34
LMO4-204ENST00000495705 DMRT2Q9Y5R5 561 aa29.64■■■□□ 2.34
LMO4-204ENST00000495705 MYO5BQ9ULV0 1848 aa29.64■■■□□ 2.33
LMO4-204ENST00000495705 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
LMO4-204ENST00000495705 TMEM2Q9UHN6 1383 aa29.61■■■□□ 2.33
LMO4-204ENST00000495705 FOXD1Q16676 465 aa29.6■■■□□ 2.33
LMO4-204ENST00000495705 NCKAP5LQ9HCH0 1330 aa29.6■■■□□ 2.33
LMO4-204ENST00000495705 KIF1BO60333 1816 aa29.59■■■□□ 2.33
LMO4-204ENST00000495705 NEURL4Q96JN8 1562 aa29.59■■■□□ 2.33
LMO4-204ENST00000495705 SCAF11Q99590 1463 aaKnown RBP29.56■■■□□ 2.32
LMO4-204ENST00000495705 CHGAP10645 457 aaKnown RBP29.56■■■□□ 2.32
LMO4-204ENST00000495705 MED14O60244 1454 aa29.55■■■□□ 2.32
LMO4-204ENST00000495705 CCDC144AA2RUR9 1427 aa29.54■■■□□ 2.32
LMO4-204ENST00000495705 EID1Q9Y6B2 187 aa29.54■■■□□ 2.32
LMO4-204ENST00000495705 IQGAP1P46940 1657 aa29.51■■■□□ 2.31
LMO4-204ENST00000495705 NPHP4O75161 1426 aaPredicted RBP29.51■■■□□ 2.31
LMO4-204ENST00000495705 ZFYVE9O95405 1425 aa29.51■■■□□ 2.31
LMO4-204ENST00000495705 TXNDC2Q86VQ3 553 aa29.5■■■□□ 2.31
LMO4-204ENST00000495705 RIMS2Q9UQ26 1411 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms