RNA–Protein interactions for RNA: ENST00000490537.6

EXOSC8-210, Transcript of exosome component 8, humanhuman

TSL 1 (best)

Gene EXOSC8, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-210ENST00000490537 SPAG9O60271 1321 aaKnown RBP11.43□□□□□ -0.58
EXOSC8-210ENST00000490537 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
EXOSC8-210ENST00000490537 CDC42BPAQ5VT25 1732 aa11.43□□□□□ -0.58
EXOSC8-210ENST00000490537 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
EXOSC8-210ENST00000490537 ATP7AQ04656 1500 aa11.42□□□□□ -0.58
EXOSC8-210ENST00000490537 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
EXOSC8-210ENST00000490537 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.58
EXOSC8-210ENST00000490537 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
EXOSC8-210ENST00000490537 ZC3H13Q5T200 1668 aaKnown RBP11.41□□□□□ -0.58
EXOSC8-210ENST00000490537 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
EXOSC8-210ENST00000490537 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
EXOSC8-210ENST00000490537 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
EXOSC8-210ENST00000490537 INO80Q9ULG1 1556 aaPredicted RBP11.4□□□□□ -0.58
EXOSC8-210ENST00000490537 CLIP1P30622 1438 aa11.4□□□□□ -0.58
EXOSC8-210ENST00000490537 LRP6O75581 1613 aa11.38□□□□□ -0.59
EXOSC8-210ENST00000490537 PZPP20742 1482 aa11.38□□□□□ -0.59
EXOSC8-210ENST00000490537 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
EXOSC8-210ENST00000490537 MIA2Q96PC5 1412 aa11.37□□□□□ -0.59
EXOSC8-210ENST00000490537 EP400Q96L91 3159 aa11.36□□□□□ -0.59
EXOSC8-210ENST00000490537 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
EXOSC8-210ENST00000490537 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
EXOSC8-210ENST00000490537 PHLPP1O60346 1717 aa11.34□□□□□ -0.59
EXOSC8-210ENST00000490537 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
EXOSC8-210ENST00000490537 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.59
EXOSC8-210ENST00000490537 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.6
EXOSC8-210ENST00000490537 JCADQ9P266 1359 aa11.33□□□□□ -0.6
EXOSC8-210ENST00000490537 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
EXOSC8-210ENST00000490537 LTKP29376 864 aa11.32□□□□□ -0.6
EXOSC8-210ENST00000490537 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
EXOSC8-210ENST00000490537 RXRBP28702 533 aa11.31□□□□□ -0.6
EXOSC8-210ENST00000490537 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
EXOSC8-210ENST00000490537 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
EXOSC8-210ENST00000490537 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
EXOSC8-210ENST00000490537 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
EXOSC8-210ENST00000490537 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
EXOSC8-210ENST00000490537 KIF3BO15066 747 aa11.29□□□□□ -0.6
EXOSC8-210ENST00000490537 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
EXOSC8-210ENST00000490537 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
EXOSC8-210ENST00000490537 SCAF11Q99590 1463 aaKnown RBP11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 UBR1Q8IWV7 1749 aa11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 CFAP65Q6ZU64 1925 aaKnown RBP11.28□□□□□ -0.6
EXOSC8-210ENST00000490537 DHX29Q7Z478 1369 aaKnown RBP11.27□□□□□ -0.61
EXOSC8-210ENST00000490537 RGS12O14924 1447 aa11.27□□□□□ -0.61
EXOSC8-210ENST00000490537 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.61
EXOSC8-210ENST00000490537 ZNF644Q9H582 1327 aaPredicted RBP11.27□□□□□ -0.61
EXOSC8-210ENST00000490537 NCOA2Q15596 1464 aa11.26□□□□□ -0.61
EXOSC8-210ENST00000490537 TXNDC2Q86VQ3 553 aa11.25□□□□□ -0.61
EXOSC8-210ENST00000490537 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
EXOSC8-210ENST00000490537 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
EXOSC8-210ENST00000490537 SPATA31A6Q5VVP1 1343 aa11.24□□□□□ -0.61
EXOSC8-210ENST00000490537 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
EXOSC8-210ENST00000490537 CFDP1Q9UEE9 299 aaPredicted RBP11.24□□□□□ -0.61
EXOSC8-210ENST00000490537 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
EXOSC8-210ENST00000490537 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
EXOSC8-210ENST00000490537 PLEKHH2Q8IVE3 1493 aa11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 SLIT1O75093 1534 aa11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 AFF2P51816 1311 aa11.22□□□□□ -0.61
EXOSC8-210ENST00000490537 TIAM1Q13009 1591 aa11.21□□□□□ -0.61
EXOSC8-210ENST00000490537 SHPRHQ149N8 1683 aa11.21□□□□□ -0.61
EXOSC8-210ENST00000490537 KCNA6P17658 529 aa11.2□□□□□ -0.62
EXOSC8-210ENST00000490537 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
EXOSC8-210ENST00000490537 PRDM15P57071 1507 aaPredicted RBP11.2□□□□□ -0.62
EXOSC8-210ENST00000490537 SLC26A8Q96RN1 970 aa11.2□□□□□ -0.62
EXOSC8-210ENST00000490537 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
EXOSC8-210ENST00000490537 RTEL1-TNFRSF6BF6WH68 1400 aa11.19□□□□□ -0.62
EXOSC8-210ENST00000490537 ABCC3O15438 1527 aa11.18□□□□□ -0.62
EXOSC8-210ENST00000490537 MSH6P52701 1360 aa11.18□□□□□ -0.62
EXOSC8-210ENST00000490537 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
EXOSC8-210ENST00000490537 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
EXOSC8-210ENST00000490537 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
EXOSC8-210ENST00000490537 DIP2AQ14689 1571 aa11.17□□□□□ -0.62
EXOSC8-210ENST00000490537 EEA1Q15075 1411 aa11.16□□□□□ -0.62
EXOSC8-210ENST00000490537 RBM6P78332 1123 aaKnown RBP11.16□□□□□ -0.62
EXOSC8-210ENST00000490537 TET3O43151 1660 aa11.16□□□□□ -0.62
EXOSC8-210ENST00000490537 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
EXOSC8-210ENST00000490537 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
EXOSC8-210ENST00000490537 AHDC1Q5TGY3 1603 aaPredicted RBP11.15□□□□□ -0.62
EXOSC8-210ENST00000490537 KDM5AP29375 1690 aaKnown RBP11.15□□□□□ -0.62
EXOSC8-210ENST00000490537 NWD1Q149M9 1564 aa11.15□□□□□ -0.62
EXOSC8-210ENST00000490537 CEP152O94986 1710 aa11.14□□□□□ -0.63
EXOSC8-210ENST00000490537 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
EXOSC8-210ENST00000490537 TMEM2Q9UHN6 1383 aa11.14□□□□□ -0.63
EXOSC8-210ENST00000490537 NKTRP30414 1462 aaKnown RBP11.13□□□□□ -0.63
EXOSC8-210ENST00000490537 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
EXOSC8-210ENST00000490537 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
EXOSC8-210ENST00000490537 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
EXOSC8-210ENST00000490537 MAST1Q9Y2H9 1570 aa11.12□□□□□ -0.63
EXOSC8-210ENST00000490537 LRP5O75197 1615 aa11.1□□□□□ -0.63
EXOSC8-210ENST00000490537 CHD2O14647 1828 aaKnown RBP11.09□□□□□ -0.63
EXOSC8-210ENST00000490537 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
EXOSC8-210ENST00000490537 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms