RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
ERCC3-207ENST00000490062 MLECQ14165 292 aa26.43■■□□□ 1.82
ERCC3-207ENST00000490062 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
ERCC3-207ENST00000490062 PRDM15P57071 1507 aaPredicted RBP26.42■■□□□ 1.82
ERCC3-207ENST00000490062 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
ERCC3-207ENST00000490062 NAIPQ13075 1403 aa26.4■■□□□ 1.82
ERCC3-207ENST00000490062 PTPRMP28827 1452 aa26.4■■□□□ 1.82
ERCC3-207ENST00000490062 MROH2AA6NES4 1674 aa26.4■■□□□ 1.82
ERCC3-207ENST00000490062 GCC2Q8IWJ2 1684 aa26.4■■□□□ 1.82
ERCC3-207ENST00000490062 RIMS1Q86UR5 1692 aaKnown RBP26.39■■□□□ 1.82
ERCC3-207ENST00000490062 GGT6Q6P531 493 aa26.39■■□□□ 1.82
ERCC3-207ENST00000490062 ZC3H13Q5T200 1668 aaKnown RBP26.37■■□□□ 1.81
ERCC3-207ENST00000490062 VWDEQ8N2E2 1590 aa26.37■■□□□ 1.81
ERCC3-207ENST00000490062 UNC13BO14795 1591 aa26.34■■□□□ 1.81
ERCC3-207ENST00000490062 ABCC3O15438 1527 aa26.32■■□□□ 1.8
ERCC3-207ENST00000490062 LMTK2Q8IWU2 1503 aa26.32■■□□□ 1.8
ERCC3-207ENST00000490062 CLTCQ00610 1675 aaKnown RBP26.31■■□□□ 1.8
ERCC3-207ENST00000490062 ESF1Q9H501 851 aaKnown RBP26.31■■□□□ 1.8
ERCC3-207ENST00000490062 ZMYM3Q14202 1370 aa26.29■■□□□ 1.8
ERCC3-207ENST00000490062 C3P01024 1663 aa26.28■■□□□ 1.8
ERCC3-207ENST00000490062 WASHC2CQ9Y4E1 1318 aa26.28■■□□□ 1.8
ERCC3-207ENST00000490062 KANK1Q14678 1352 aa26.27■■□□□ 1.8
ERCC3-207ENST00000490062 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
ERCC3-207ENST00000490062 NPATQ14207 1427 aa26.24■■□□□ 1.79
ERCC3-207ENST00000490062 PZPP20742 1482 aa26.23■■□□□ 1.79
ERCC3-207ENST00000490062 ACIN1Q9UKV3 1341 aaKnown RBP26.23■■□□□ 1.79
ERCC3-207ENST00000490062 CEP152O94986 1710 aa26.22■■□□□ 1.79
ERCC3-207ENST00000490062 IQGAP3Q86VI3 1631 aa26.22■■□□□ 1.79
ERCC3-207ENST00000490062 CAMSAP1Q5T5Y3 1602 aa26.21■■□□□ 1.79
ERCC3-207ENST00000490062 SETD1BQ9UPS6 1966 aaKnown RBP26.21■■□□□ 1.79
ERCC3-207ENST00000490062 SETD5Q9C0A6 1442 aa26.2■■□□□ 1.78
ERCC3-207ENST00000490062 TET3O43151 1660 aa26.18■■□□□ 1.78
ERCC3-207ENST00000490062 EFCAB6Q5THR3 1501 aa26.18■■□□□ 1.78
ERCC3-207ENST00000490062 CEBPAP49715 358 aaPredicted RBP26.17■■□□□ 1.78
ERCC3-207ENST00000490062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.17■■□□□ 1.782e-7■■■■□ 20.4
ERCC3-207ENST00000490062 AEBP2Q6ZN18 517 aaPredicted RBP26.16■■□□□ 1.78
ERCC3-207ENST00000490062 RPRD2Q5VT52 1461 aaKnown RBP26.16■■□□□ 1.78
ERCC3-207ENST00000490062 HRCP23327 699 aa26.15■■□□□ 1.78
ERCC3-207ENST00000490062 NUP155O75694 1391 aa26.15■■□□□ 1.78
ERCC3-207ENST00000490062 SPATA31D1Q6ZQQ2 1576 aa26.14■■□□□ 1.78
ERCC3-207ENST00000490062 TRIM26Q12899 539 aaPredicted RBP26.13■■□□□ 1.77
ERCC3-207ENST00000490062 ERVK-7P63135 1459 aa26.1■■□□□ 1.77
ERCC3-207ENST00000490062 RAB3GAP2Q9H2M9 1393 aa26.09■■□□□ 1.77
ERCC3-207ENST00000490062 PREX1Q8TCU6 1659 aa26.09■■□□□ 1.77
ERCC3-207ENST00000490062 NOS1P29475 1434 aa26.06■■□□□ 1.76
ERCC3-207ENST00000490062 FBXO31Q5XUX0 539 aaPredicted RBP26.05■■□□□ 1.76
ERCC3-207ENST00000490062 E9PCH4 1651 aa26.05■■□□□ 1.76
ERCC3-207ENST00000490062 TNRQ92752 1358 aa26.05■■□□□ 1.76
ERCC3-207ENST00000490062 LMTK3Q96Q04 1460 aa26.04■■□□□ 1.76
ERCC3-207ENST00000490062 UHRF1BP1Q6BDS2 1440 aa26.03■■□□□ 1.76
ERCC3-207ENST00000490062 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
ERCC3-207ENST00000490062 MYO3AQ8NEV4 1616 aa26.02■■□□□ 1.76
ERCC3-207ENST00000490062 ZNF142P52746 1687 aaPredicted RBP26.02■■□□□ 1.76
ERCC3-207ENST00000490062 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
ERCC3-207ENST00000490062 TRIM52Q96A61 297 aa25.99■■□□□ 1.75
ERCC3-207ENST00000490062 PTPRTO14522 1441 aa25.97■■□□□ 1.75
ERCC3-207ENST00000490062 SYNMO15061 1565 aa25.97■■□□□ 1.75
ERCC3-207ENST00000490062 A2ML1A8K2U0 1454 aa25.97■■□□□ 1.75
ERCC3-207ENST00000490062 CFAP65Q6ZU64 1925 aaKnown RBP25.96■■□□□ 1.75
ERCC3-207ENST00000490062 CEP170BQ9Y4F5 1589 aaPredicted RBP25.96■■□□□ 1.75
ERCC3-207ENST00000490062 SLC4A1APQ9BWU0 796 aaKnown RBP25.94■■□□□ 1.74
ERCC3-207ENST00000490062 MPHOSPH9Q99550 1183 aa25.92■■□□□ 1.74
ERCC3-207ENST00000490062 SLC52A1Q9NWF4 448 aa25.92■■□□□ 1.74
ERCC3-207ENST00000490062 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
ERCC3-207ENST00000490062 PIK3C2BO00750 1634 aa25.92■■□□□ 1.74
ERCC3-207ENST00000490062 SPHKAPQ2M3C7 1700 aa25.91■■□□□ 1.74
ERCC3-207ENST00000490062 PKD2Q13563 968 aa25.9■■□□□ 1.74
ERCC3-207ENST00000490062 TRPM2O94759 1503 aa25.88■■□□□ 1.73
ERCC3-207ENST00000490062 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
ERCC3-207ENST00000490062 UGGT1Q9NYU2 1555 aa25.86■■□□□ 1.73
ERCC3-207ENST00000490062 IDI1Q13907 227 aa25.85■■□□□ 1.73
ERCC3-207ENST00000490062 UBR1Q8IWV7 1749 aa25.84■■□□□ 1.73
ERCC3-207ENST00000490062 ADGRB3O60242 1522 aa25.81■■□□□ 1.72
ERCC3-207ENST00000490062 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
ERCC3-207ENST00000490062 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
ERCC3-207ENST00000490062 SLIT1O75093 1534 aa25.78■■□□□ 1.72
ERCC3-207ENST00000490062 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
ERCC3-207ENST00000490062 HSPA2P54652 639 aa25.77■■□□□ 1.72
ERCC3-207ENST00000490062 CLTCL1P53675 1640 aa25.76■■□□□ 1.71
ERCC3-207ENST00000490062 STRCQ7RTU9 1775 aa25.74■■□□□ 1.71
ERCC3-207ENST00000490062 ANKRD30BQ9BXX2 1392 aa25.72■■□□□ 1.71
ERCC3-207ENST00000490062 FOXD1Q16676 465 aa25.72■■□□□ 1.71
ERCC3-207ENST00000490062 NEURL4Q96JN8 1562 aa25.72■■□□□ 1.71
ERCC3-207ENST00000490062 TMEM2Q9UHN6 1383 aa25.71■■□□□ 1.71
ERCC3-207ENST00000490062 CCDC144AA2RUR9 1427 aa25.7■■□□□ 1.7
ERCC3-207ENST00000490062 MED14O60244 1454 aa25.68■■□□□ 1.7
ERCC3-207ENST00000490062 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
ERCC3-207ENST00000490062 KIF1BO60333 1816 aa25.67■■□□□ 1.7
ERCC3-207ENST00000490062 MYO5BQ9ULV0 1848 aa25.67■■□□□ 1.7
ERCC3-207ENST00000490062 ZFYVE9O95405 1425 aa25.67■■□□□ 1.7
ERCC3-207ENST00000490062 POLR1AO95602 1720 aaPredicted RBP25.67■■□□□ 1.7
ERCC3-207ENST00000490062 STAG3Q9UJ98 1225 aa25.67■■□□□ 1.7
ERCC3-207ENST00000490062 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
ERCC3-207ENST00000490062 DHX57Q6P158 1386 aaKnown RBP25.65■■□□□ 1.7
ERCC3-207ENST00000490062 SCAF11Q99590 1463 aaKnown RBP25.64■■□□□ 1.69
ERCC3-207ENST00000490062 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
ERCC3-207ENST00000490062 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
ERCC3-207ENST00000490062 RIMS2Q9UQ26 1411 aa25.6■■□□□ 1.69
ERCC3-207ENST00000490062 HDGFP51858 240 aaKnown RBP25.59■■□□□ 1.69
ERCC3-207ENST00000490062 NCKAP5LQ9HCH0 1330 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms