RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PTPRKQ15262 1439 aa20.27■□□□□ 0.83
SF1-216ENST00000486867 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
SF1-216ENST00000486867 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
SF1-216ENST00000486867 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
SF1-216ENST00000486867 KDM5DQ9BY66 1539 aa20.24■□□□□ 0.83
SF1-216ENST00000486867 ROCK1Q13464 1354 aa20.23■□□□□ 0.83
SF1-216ENST00000486867 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
SF1-216ENST00000486867 PREX1Q8TCU6 1659 aa20.22■□□□□ 0.83
SF1-216ENST00000486867 KIF3BO15066 747 aa20.22■□□□□ 0.83
SF1-216ENST00000486867 CEP152O94986 1710 aa20.19■□□□□ 0.82
SF1-216ENST00000486867 NPATQ14207 1427 aa20.19■□□□□ 0.82
SF1-216ENST00000486867 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
SF1-216ENST00000486867 GGT6Q6P531 493 aa20.18■□□□□ 0.82
SF1-216ENST00000486867 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
SF1-216ENST00000486867 LMTK3Q96Q04 1460 aa20.18■□□□□ 0.82
SF1-216ENST00000486867 ABCC3O15438 1527 aa20.17■□□□□ 0.82
SF1-216ENST00000486867 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
SF1-216ENST00000486867 ZMYM3Q14202 1370 aa20.17■□□□□ 0.82
SF1-216ENST00000486867 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
SF1-216ENST00000486867 CAMSAP1Q5T5Y3 1602 aa20.15■□□□□ 0.82
SF1-216ENST00000486867 UNC13BO14795 1591 aa20.14■□□□□ 0.81
SF1-216ENST00000486867 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
SF1-216ENST00000486867 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
SF1-216ENST00000486867 PZPP20742 1482 aa20.13■□□□□ 0.81
SF1-216ENST00000486867 CEBPAP49715 358 aaPredicted RBP20.13■□□□□ 0.81
SF1-216ENST00000486867 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
SF1-216ENST00000486867 ZNF142P52746 1687 aaPredicted RBP20.12■□□□□ 0.81
SF1-216ENST00000486867 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
SF1-216ENST00000486867 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
SF1-216ENST00000486867 WASHC2CQ9Y4E1 1318 aa20.08■□□□□ 0.81
SF1-216ENST00000486867 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
SF1-216ENST00000486867 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
SF1-216ENST00000486867 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
SF1-216ENST00000486867 IQGAP3Q86VI3 1631 aa20.05■□□□□ 0.8
SF1-216ENST00000486867 TET3O43151 1660 aa20.05■□□□□ 0.8
SF1-216ENST00000486867 NAIPQ13075 1403 aa20.04■□□□□ 0.8
SF1-216ENST00000486867 EFCAB6Q5THR3 1501 aa20.04■□□□□ 0.8
SF1-216ENST00000486867 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
SF1-216ENST00000486867 KANK1Q14678 1352 aa20.02■□□□□ 0.8
SF1-216ENST00000486867 CEP170BQ9Y4F5 1589 aaPredicted RBP20.02■□□□□ 0.8
SF1-216ENST00000486867 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
SF1-216ENST00000486867 ITGAEP38570 1179 aa20.01■□□□□ 0.79
SF1-216ENST00000486867 STRCQ7RTU9 1775 aa20■□□□□ 0.79
SF1-216ENST00000486867 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
SF1-216ENST00000486867 A2ML1A8K2U0 1454 aa19.98■□□□□ 0.79
SF1-216ENST00000486867 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
SF1-216ENST00000486867 TNRQ92752 1358 aa19.97■□□□□ 0.79
SF1-216ENST00000486867 NLRP1Q9C000 1473 aa19.97■□□□□ 0.79
SF1-216ENST00000486867 E9PCH4 1651 aa19.97■□□□□ 0.79
SF1-216ENST00000486867 FBXO31Q5XUX0 539 aaPredicted RBP19.96■□□□□ 0.79
SF1-216ENST00000486867 KDM5AP29375 1690 aaKnown RBP19.96■□□□□ 0.79
SF1-216ENST00000486867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.782e-8■□□□□ 10.5
SF1-216ENST00000486867 NOS1P29475 1434 aa19.93■□□□□ 0.78
SF1-216ENST00000486867 SYNMO15061 1565 aa19.93■□□□□ 0.78
SF1-216ENST00000486867 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
SF1-216ENST00000486867 UBR1Q8IWV7 1749 aa19.92■□□□□ 0.78
SF1-216ENST00000486867 HSPA2P54652 639 aa19.91■□□□□ 0.78
SF1-216ENST00000486867 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
SF1-216ENST00000486867 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.77
SF1-216ENST00000486867 NUP155O75694 1391 aa19.88■□□□□ 0.77
SF1-216ENST00000486867 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
SF1-216ENST00000486867 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
SF1-216ENST00000486867 MYO5BQ9ULV0 1848 aa19.83■□□□□ 0.77
SF1-216ENST00000486867 PTPRTO14522 1441 aa19.82■□□□□ 0.76
SF1-216ENST00000486867 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
SF1-216ENST00000486867 SLIT1O75093 1534 aa19.81■□□□□ 0.76
SF1-216ENST00000486867 ARHGAP23Q9P227 1491 aa19.8■□□□□ 0.76
SF1-216ENST00000486867 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
SF1-216ENST00000486867 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
SF1-216ENST00000486867 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
SF1-216ENST00000486867 TMEM131LA2VDJ0 1609 aa19.78■□□□□ 0.76
SF1-216ENST00000486867 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
SF1-216ENST00000486867 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.76
SF1-216ENST00000486867 MED14O60244 1454 aa19.77■□□□□ 0.76
SF1-216ENST00000486867 PKD2Q13563 968 aa19.76■□□□□ 0.75
SF1-216ENST00000486867 IDI1Q13907 227 aa19.76■□□□□ 0.75
SF1-216ENST00000486867 TRPM2O94759 1503 aa19.76■□□□□ 0.75
SF1-216ENST00000486867 DMRT2Q9Y5R5 561 aa19.75■□□□□ 0.75
SF1-216ENST00000486867 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
SF1-216ENST00000486867 IQGAP1P46940 1657 aa19.72■□□□□ 0.75
SF1-216ENST00000486867 HRCP23327 699 aa19.71■□□□□ 0.75
SF1-216ENST00000486867 CLTCL1P53675 1640 aa19.71■□□□□ 0.75
SF1-216ENST00000486867 KIF1BO60333 1816 aa19.71■□□□□ 0.75
SF1-216ENST00000486867 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
SF1-216ENST00000486867 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
SF1-216ENST00000486867 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
SF1-216ENST00000486867 ANKLE2Q86XL3 938 aa19.68■□□□□ 0.74
SF1-216ENST00000486867 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
SF1-216ENST00000486867 ZFYVE9O95405 1425 aa19.67■□□□□ 0.74
SF1-216ENST00000486867 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
SF1-216ENST00000486867 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
SF1-216ENST00000486867 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
SF1-216ENST00000486867 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
SF1-216ENST00000486867 LTKP29376 864 aa19.62■□□□□ 0.73
SF1-216ENST00000486867 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
SF1-216ENST00000486867 STRCP1A6NGW2 1772 aa19.59■□□□□ 0.73
SF1-216ENST00000486867 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
SF1-216ENST00000486867 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
SF1-216ENST00000486867 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
SF1-216ENST00000486867 PPLO60437 1756 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms