RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 TNRQ92752 1358 aa24.87■■□□□ 1.57
PLXNB3-208ENST00000485980 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
PLXNB3-208ENST00000485980 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
PLXNB3-208ENST00000485980 ANKLE2Q86XL3 938 aa24.83■■□□□ 1.57
PLXNB3-208ENST00000485980 TIAM1Q13009 1591 aa24.83■■□□□ 1.57
PLXNB3-208ENST00000485980 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.57
PLXNB3-208ENST00000485980 WASHC2CQ9Y4E1 1318 aa24.83■■□□□ 1.56
PLXNB3-208ENST00000485980 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.56
PLXNB3-208ENST00000485980 CPS1P31327 1500 aa24.82■■□□□ 1.56
PLXNB3-208ENST00000485980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.56
PLXNB3-208ENST00000485980 THEMISQ8N1K5 641 aaPredicted RBP24.8■■□□□ 1.56
PLXNB3-208ENST00000485980 MED1Q15648 1581 aaPredicted RBP24.8■■□□□ 1.56
PLXNB3-208ENST00000485980 NEURL4Q96JN8 1562 aa24.79■■□□□ 1.56
PLXNB3-208ENST00000485980 PZPP20742 1482 aa24.77■■□□□ 1.56
PLXNB3-208ENST00000485980 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
PLXNB3-208ENST00000485980 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
PLXNB3-208ENST00000485980 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
PLXNB3-208ENST00000485980 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
PLXNB3-208ENST00000485980 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
PLXNB3-208ENST00000485980 CCDC141Q6ZP82 1450 aa24.73■■□□□ 1.55
PLXNB3-208ENST00000485980 CEP162Q5TB80 1403 aa24.73■■□□□ 1.55
PLXNB3-208ENST00000485980 NPHP4O75161 1426 aaPredicted RBP24.72■■□□□ 1.55
PLXNB3-208ENST00000485980 RSPH4AQ5TD94 716 aa24.72■■□□□ 1.55
PLXNB3-208ENST00000485980 UGGT1Q9NYU2 1555 aa24.71■■□□□ 1.55
PLXNB3-208ENST00000485980 FAM135AQ9P2D6 1515 aa24.71■■□□□ 1.55
PLXNB3-208ENST00000485980 VWDEQ8N2E2 1590 aa24.7■■□□□ 1.54
PLXNB3-208ENST00000485980 NLRP1Q9C000 1473 aa24.7■■□□□ 1.54
PLXNB3-208ENST00000485980 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
PLXNB3-208ENST00000485980 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
PLXNB3-208ENST00000485980 CAMSAP2Q08AD1 1489 aa24.68■■□□□ 1.54
PLXNB3-208ENST00000485980 MED14O60244 1454 aa24.65■■□□□ 1.54
PLXNB3-208ENST00000485980 DEPDC5O75140 1603 aa24.64■■□□□ 1.54
PLXNB3-208ENST00000485980 NCOA2Q15596 1464 aa24.64■■□□□ 1.54
PLXNB3-208ENST00000485980 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
PLXNB3-208ENST00000485980 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
PLXNB3-208ENST00000485980 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
PLXNB3-208ENST00000485980 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
PLXNB3-208ENST00000485980 ARHGEF5Q12774 1597 aa24.55■■□□□ 1.52
PLXNB3-208ENST00000485980 CFAP65Q6ZU64 1925 aaKnown RBP24.55■■□□□ 1.52
PLXNB3-208ENST00000485980 ABCC3O15438 1527 aa24.54■■□□□ 1.52
PLXNB3-208ENST00000485980 ERVK-7P63135 1459 aa24.51■■□□□ 1.51
PLXNB3-208ENST00000485980 RNF17Q9BXT8 1623 aaKnown RBP24.51■■□□□ 1.51
PLXNB3-208ENST00000485980 ZC3H13Q5T200 1668 aaKnown RBP24.5■■□□□ 1.51
PLXNB3-208ENST00000485980 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
PLXNB3-208ENST00000485980 SYNMO15061 1565 aa24.49■■□□□ 1.51
PLXNB3-208ENST00000485980 SCAF11Q99590 1463 aaKnown RBP24.46■■□□□ 1.51
PLXNB3-208ENST00000485980 LTKP29376 864 aa24.46■■□□□ 1.51
PLXNB3-208ENST00000485980 UBR1Q8IWV7 1749 aa24.45■■□□□ 1.5
PLXNB3-208ENST00000485980 CEP152O94986 1710 aa24.44■■□□□ 1.5
PLXNB3-208ENST00000485980 EID1Q9Y6B2 187 aa24.44■■□□□ 1.5
PLXNB3-208ENST00000485980 MAST1Q9Y2H9 1570 aa24.44■■□□□ 1.5
PLXNB3-208ENST00000485980 EIF2AK4Q9P2K8 1649 aaKnown RBP24.43■■□□□ 1.5
PLXNB3-208ENST00000485980 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
PLXNB3-208ENST00000485980 LRRC9Q6ZRR7 1453 aa24.4■■□□□ 1.5
PLXNB3-208ENST00000485980 MROH1Q8NDA8 1641 aa24.4■■□□□ 1.5
PLXNB3-208ENST00000485980 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.49
PLXNB3-208ENST00000485980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.38■■□□□ 1.49
PLXNB3-208ENST00000485980 ARHGAP23Q9P227 1491 aa24.37■■□□□ 1.49
PLXNB3-208ENST00000485980 SLIT1O75093 1534 aa24.36■■□□□ 1.49
PLXNB3-208ENST00000485980 DUOX2Q9NRD8 1548 aa24.36■■□□□ 1.49
PLXNB3-208ENST00000485980 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
PLXNB3-208ENST00000485980 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
PLXNB3-208ENST00000485980 XIRP1Q702N8 1843 aaKnown RBP24.35■■□□□ 1.49
PLXNB3-208ENST00000485980 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
PLXNB3-208ENST00000485980 ARHGAP31Q2M1Z3 1444 aa24.32■■□□□ 1.48
PLXNB3-208ENST00000485980 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
PLXNB3-208ENST00000485980 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
PLXNB3-208ENST00000485980 TMEM94Q12767 1356 aa24.3■■□□□ 1.48
PLXNB3-208ENST00000485980 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
PLXNB3-208ENST00000485980 VPS8Q8N3P4 1428 aa24.3■■□□□ 1.48
PLXNB3-208ENST00000485980 PROSER2Q86WR7 435 aaPredicted RBP24.3■■□□□ 1.48
PLXNB3-208ENST00000485980 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
PLXNB3-208ENST00000485980 PIK3C2BO00750 1634 aa24.29■■□□□ 1.48
PLXNB3-208ENST00000485980 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
PLXNB3-208ENST00000485980 KCNA6P17658 529 aa24.28■■□□□ 1.48
PLXNB3-208ENST00000485980 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
PLXNB3-208ENST00000485980 KANK1Q14678 1352 aa24.27■■□□□ 1.48
PLXNB3-208ENST00000485980 PRDM15P57071 1507 aaPredicted RBP24.26■■□□□ 1.47
PLXNB3-208ENST00000485980 IDI1Q13907 227 aa24.26■■□□□ 1.47
PLXNB3-208ENST00000485980 ERBINQ96RT1 1412 aa24.26■■□□□ 1.47
PLXNB3-208ENST00000485980 BCANQ96GW7 911 aa24.25■■□□□ 1.47
PLXNB3-208ENST00000485980 EFCAB6Q5THR3 1501 aa24.22■■□□□ 1.47
PLXNB3-208ENST00000485980 ABCC5O15440 1437 aa24.22■■□□□ 1.47
PLXNB3-208ENST00000485980 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
PLXNB3-208ENST00000485980 ROBO1Q9Y6N7 1651 aa24.21■■□□□ 1.47
PLXNB3-208ENST00000485980 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
PLXNB3-208ENST00000485980 MAP3K1Q13233 1512 aa24.19■■□□□ 1.46
PLXNB3-208ENST00000485980 CROCC2H7BZ55 1655 aa24.17■■□□□ 1.46
PLXNB3-208ENST00000485980 TET3O43151 1660 aa24.16■■□□□ 1.46
PLXNB3-208ENST00000485980 MSH6P52701 1360 aa24.16■■□□□ 1.46
PLXNB3-208ENST00000485980 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
PLXNB3-208ENST00000485980 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
PLXNB3-208ENST00000485980 DAPK1P53355 1430 aa24.15■■□□□ 1.46
PLXNB3-208ENST00000485980 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
PLXNB3-208ENST00000485980 APLP2Q06481 763 aa24.14■■□□□ 1.45
PLXNB3-208ENST00000485980 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
PLXNB3-208ENST00000485980 LMTK2Q8IWU2 1503 aa24.11■■□□□ 1.45
PLXNB3-208ENST00000485980 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
PLXNB3-208ENST00000485980 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
PLXNB3-208ENST00000485980 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms