RNA–Protein interactions for RNA: ENST00000485096.5

NCK1-209, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-209ENST00000485096 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
NCK1-209ENST00000485096 TNRQ92752 1358 aa26.71■■□□□ 1.87
NCK1-209ENST00000485096 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.87
NCK1-209ENST00000485096 SHANK2Q9UPX8 1470 aa26.68■■□□□ 1.86
NCK1-209ENST00000485096 CPS1P31327 1500 aa26.67■■□□□ 1.86
NCK1-209ENST00000485096 DHX29Q7Z478 1369 aaKnown RBP26.67■■□□□ 1.86
NCK1-209ENST00000485096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.67■■□□□ 1.86
NCK1-209ENST00000485096 KIF3BO15066 747 aa26.65■■□□□ 1.86
NCK1-209ENST00000485096 PZPP20742 1482 aa26.65■■□□□ 1.86
NCK1-209ENST00000485096 VWDEQ8N2E2 1590 aa26.64■■□□□ 1.86
NCK1-209ENST00000485096 KDM5DQ9BY66 1539 aa26.64■■□□□ 1.85
NCK1-209ENST00000485096 TOM1O60784 492 aa26.63■■□□□ 1.85
NCK1-209ENST00000485096 SENP3Q9H4L4 574 aaPredicted RBP26.63■■□□□ 1.85
NCK1-209ENST00000485096 ALKQ9UM73 1620 aa26.63■■□□□ 1.85
NCK1-209ENST00000485096 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
NCK1-209ENST00000485096 RTEL1-TNFRSF6BF6WH68 1400 aa26.63■■□□□ 1.85
NCK1-209ENST00000485096 CCDC141Q6ZP82 1450 aa26.57■■□□□ 1.84
NCK1-209ENST00000485096 WASHC2CQ9Y4E1 1318 aa26.57■■□□□ 1.84
NCK1-209ENST00000485096 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
NCK1-209ENST00000485096 CAMSAP2Q08AD1 1489 aa26.56■■□□□ 1.84
NCK1-209ENST00000485096 ANKLE2Q86XL3 938 aa26.56■■□□□ 1.84
NCK1-209ENST00000485096 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
NCK1-209ENST00000485096 UGGT1Q9NYU2 1555 aa26.55■■□□□ 1.84
NCK1-209ENST00000485096 MIA2Q96PC5 1412 aa26.55■■□□□ 1.84
NCK1-209ENST00000485096 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
NCK1-209ENST00000485096 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
NCK1-209ENST00000485096 NLRP1Q9C000 1473 aa26.51■■□□□ 1.83
NCK1-209ENST00000485096 MED14O60244 1454 aa26.5■■□□□ 1.83
NCK1-209ENST00000485096 THEMISQ8N1K5 641 aaPredicted RBP26.5■■□□□ 1.83
NCK1-209ENST00000485096 STRCP1A6NGW2 1772 aa26.5■■□□□ 1.83
NCK1-209ENST00000485096 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
NCK1-209ENST00000485096 NCOA2Q15596 1464 aa26.49■■□□□ 1.83
NCK1-209ENST00000485096 IQGAP1P46940 1657 aa26.49■■□□□ 1.83
NCK1-209ENST00000485096 LRRC7Q96NW7 1537 aa26.46■■□□□ 1.83
NCK1-209ENST00000485096 ABCC3O15438 1527 aa26.43■■□□□ 1.82
NCK1-209ENST00000485096 RNF17Q9BXT8 1623 aaKnown RBP26.41■■□□□ 1.82
NCK1-209ENST00000485096 ARHGEF5Q12774 1597 aa26.39■■□□□ 1.82
NCK1-209ENST00000485096 ERVK-7P63135 1459 aa26.39■■□□□ 1.82
NCK1-209ENST00000485096 SYNMO15061 1565 aa26.38■■□□□ 1.81
NCK1-209ENST00000485096 ZC3H13Q5T200 1668 aaKnown RBP26.36■■□□□ 1.81
NCK1-209ENST00000485096 MROH1Q8NDA8 1641 aa26.35■■□□□ 1.81
NCK1-209ENST00000485096 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
NCK1-209ENST00000485096 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
NCK1-209ENST00000485096 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
NCK1-209ENST00000485096 CEP152O94986 1710 aa26.31■■□□□ 1.8
NCK1-209ENST00000485096 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
NCK1-209ENST00000485096 RGS17Q9UGC6 210 aaPredicted RBP26.31■■□□□ 1.8
NCK1-209ENST00000485096 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
NCK1-209ENST00000485096 LTKP29376 864 aa26.28■■□□□ 1.8
NCK1-209ENST00000485096 MAST1Q9Y2H9 1570 aa26.28■■□□□ 1.8
NCK1-209ENST00000485096 EIF2AK4Q9P2K8 1649 aaKnown RBP26.26■■□□□ 1.79
NCK1-209ENST00000485096 XIRP1Q702N8 1843 aaKnown RBP26.24■■□□□ 1.79
NCK1-209ENST00000485096 CFAP65Q6ZU64 1925 aaKnown RBP26.24■■□□□ 1.79
NCK1-209ENST00000485096 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
NCK1-209ENST00000485096 TXNDC2Q86VQ3 553 aa26.22■■□□□ 1.79
NCK1-209ENST00000485096 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
NCK1-209ENST00000485096 SLIT1O75093 1534 aa26.2■■□□□ 1.79
NCK1-209ENST00000485096 PIK3C2BO00750 1634 aa26.15■■□□□ 1.78
NCK1-209ENST00000485096 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
NCK1-209ENST00000485096 PRDM15P57071 1507 aaPredicted RBP26.14■■□□□ 1.78
NCK1-209ENST00000485096 DUOX2Q9NRD8 1548 aa26.14■■□□□ 1.78
NCK1-209ENST00000485096 POTEAQ6S8J7 498 aa26.14■■□□□ 1.78
NCK1-209ENST00000485096 RBM33Q96EV2 1170 aaKnown RBP26.14■■□□□ 1.78
NCK1-209ENST00000485096 TMEM94Q12767 1356 aa26.12■■□□□ 1.77
NCK1-209ENST00000485096 KIF15Q9NS87 1388 aa26.11■■□□□ 1.77
NCK1-209ENST00000485096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.11■■□□□ 1.773e-8■■■□□ 14.9
NCK1-209ENST00000485096 MYOM3Q5VTT5 1437 aa26.11■■□□□ 1.77
NCK1-209ENST00000485096 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
NCK1-209ENST00000485096 EID1Q9Y6B2 187 aa26.1■■□□□ 1.77
NCK1-209ENST00000485096 ARHGAP31Q2M1Z3 1444 aa26.1■■□□□ 1.77
NCK1-209ENST00000485096 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
NCK1-209ENST00000485096 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
NCK1-209ENST00000485096 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
NCK1-209ENST00000485096 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.77
NCK1-209ENST00000485096 RRP7BPQ9NSQ0 103 aa26.07■■□□□ 1.76
NCK1-209ENST00000485096 SLC26A8Q96RN1 970 aa26.05■■□□□ 1.76
NCK1-209ENST00000485096 STAG3Q9UJ98 1225 aa26.05■■□□□ 1.76
NCK1-209ENST00000485096 ERBINQ96RT1 1412 aa26.04■■□□□ 1.76
NCK1-209ENST00000485096 EFCAB6Q5THR3 1501 aa26.04■■□□□ 1.76
NCK1-209ENST00000485096 SETD1AO15047 1707 aaKnown RBP26.03■■□□□ 1.76
NCK1-209ENST00000485096 ABCC5O15440 1437 aa26.03■■□□□ 1.76
NCK1-209ENST00000485096 CROCC2H7BZ55 1655 aa26.03■■□□□ 1.76
NCK1-209ENST00000485096 KCNA6P17658 529 aa26■■□□□ 1.75
NCK1-209ENST00000485096 IDI1Q13907 227 aa26■■□□□ 1.75
NCK1-209ENST00000485096 PROSER2Q86WR7 435 aaPredicted RBP26■■□□□ 1.75
NCK1-209ENST00000485096 TET3O43151 1660 aa25.99■■□□□ 1.75
NCK1-209ENST00000485096 DAPK1P53355 1430 aa25.95■■□□□ 1.74
NCK1-209ENST00000485096 NWD1Q149M9 1564 aa25.95■■□□□ 1.74
NCK1-209ENST00000485096 KANK1Q14678 1352 aa25.95■■□□□ 1.74
NCK1-209ENST00000485096 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
NCK1-209ENST00000485096 PTPN23Q9H3S7 1636 aa25.94■■□□□ 1.74
NCK1-209ENST00000485096 ADGRB3O60242 1522 aa25.93■■□□□ 1.74
NCK1-209ENST00000485096 CHIC2Q9UKJ5 165 aa25.92■■□□□ 1.74
NCK1-209ENST00000485096 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
NCK1-209ENST00000485096 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
NCK1-209ENST00000485096 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
NCK1-209ENST00000485096 PHLPP1O60346 1717 aa25.91■■□□□ 1.74
NCK1-209ENST00000485096 BCANQ96GW7 911 aa25.9■■□□□ 1.74
NCK1-209ENST00000485096 NOS1P29475 1434 aa25.89■■□□□ 1.74
NCK1-209ENST00000485096 MSH6P52701 1360 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms