RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 TMEM92Q6UXU6 159 aa8.49□□□□□ -1.05
XPA-203ENST00000485042 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
XPA-203ENST00000485042 DDX12PQ92771 950 aa8.47□□□□□ -1.05
XPA-203ENST00000485042 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
XPA-203ENST00000485042 TBC1D12O60347 775 aa8.46□□□□□ -1.06
XPA-203ENST00000485042 OSBPP22059 807 aa8.46□□□□□ -1.06
XPA-203ENST00000485042 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
XPA-203ENST00000485042 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
XPA-203ENST00000485042 IRF6O14896 467 aa8.45□□□□□ -1.06
XPA-203ENST00000485042 GNPATO15228 680 aa8.45□□□□□ -1.06
XPA-203ENST00000485042 OXER1Q8TDS5 423 aa8.45□□□□□ -1.06
XPA-203ENST00000485042 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
XPA-203ENST00000485042 FCHSD2O94868 740 aa8.44□□□□□ -1.06
XPA-203ENST00000485042 HIC1Q14526 733 aa8.43□□□□□ -1.06
XPA-203ENST00000485042 HOMEZQ8IX15 550 aa8.43□□□□□ -1.06
XPA-203ENST00000485042 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
XPA-203ENST00000485042 EVI5O60447 810 aa8.42□□□□□ -1.06
XPA-203ENST00000485042 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
XPA-203ENST00000485042 FAM117AQ9C073 453 aa8.42□□□□□ -1.06
XPA-203ENST00000485042 LSM11P83369 360 aaKnown RBP eCLIP8.4□□□□□ -1.06
XPA-203ENST00000485042 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
XPA-203ENST00000485042 FECHP22830 423 aa8.39□□□□□ -1.07
XPA-203ENST00000485042 AMHR2Q16671 573 aa8.39□□□□□ -1.07
XPA-203ENST00000485042 PARP9Q8IXQ6 854 aa8.38□□□□□ -1.07
XPA-203ENST00000485042 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
XPA-203ENST00000485042 KHSRPQ92945 711 aaKnown RBP eCLIP8.37□□□□□ -1.07
XPA-203ENST00000485042 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
XPA-203ENST00000485042 PTGDRQ13258 359 aa8.36□□□□□ -1.07
XPA-203ENST00000485042 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
XPA-203ENST00000485042 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
XPA-203ENST00000485042 PTCD2Q8WV60 388 aaKnown RBP8.35□□□□□ -1.07
XPA-203ENST00000485042 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
XPA-203ENST00000485042 PBX2P40425 430 aa8.32□□□□□ -1.08
XPA-203ENST00000485042 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
XPA-203ENST00000485042 MAP3K7O43318 606 aa8.31□□□□□ -1.08
XPA-203ENST00000485042 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
XPA-203ENST00000485042 EPAS1Q99814 870 aa8.31□□□□□ -1.08
XPA-203ENST00000485042 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
XPA-203ENST00000485042 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
XPA-203ENST00000485042 SLC34A2O95436 690 aa8.3□□□□□ -1.08
XPA-203ENST00000485042 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
XPA-203ENST00000485042 RBM33Q96EV2 1170 aaKnown RBP8.3□□□□□ -1.08
XPA-203ENST00000485042 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
XPA-203ENST00000485042 PHF14O94880 888 aa8.29□□□□□ -1.08
XPA-203ENST00000485042 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
XPA-203ENST00000485042 NUDT7P0C024 238 aa8.27□□□□□ -1.09
XPA-203ENST00000485042 MS4A1P11836 297 aa8.27□□□□□ -1.09
XPA-203ENST00000485042 GOPCQ9HD26 462 aa8.27□□□□□ -1.09
XPA-203ENST00000485042 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
XPA-203ENST00000485042 AXIN2Q9Y2T1 843 aa8.27□□□□□ -1.09
XPA-203ENST00000485042 FLIIQ13045 1269 aa8.26□□□□□ -1.09
XPA-203ENST00000485042 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
XPA-203ENST00000485042 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
XPA-203ENST00000485042 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
XPA-203ENST00000485042 CLCN1P35523 988 aa8.25□□□□□ -1.09
XPA-203ENST00000485042 MDM2Q00987 491 aaPredicted RBP8.25□□□□□ -1.09
XPA-203ENST00000485042 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
XPA-203ENST00000485042 LHX6Q9UPM6 363 aa8.25□□□□□ -1.09
XPA-203ENST00000485042 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
XPA-203ENST00000485042 PCDHGA4Q9Y5G9 962 aa8.24□□□□□ -1.09
XPA-203ENST00000485042 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
XPA-203ENST00000485042 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
XPA-203ENST00000485042 ADGRD1Q6QNK2 874 aa8.22□□□□□ -1.09
XPA-203ENST00000485042 JPH4Q96JJ6 628 aa8.22□□□□□ -1.09
XPA-203ENST00000485042 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
XPA-203ENST00000485042 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
XPA-203ENST00000485042 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
XPA-203ENST00000485042 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
XPA-203ENST00000485042 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
XPA-203ENST00000485042 ARHGAP33O14559 1287 aa8.19□□□□□ -1.1
XPA-203ENST00000485042 OATP04181 439 aa8.19□□□□□ -1.1
XPA-203ENST00000485042 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
XPA-203ENST00000485042 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
XPA-203ENST00000485042 FOSBP53539 338 aa8.18□□□□□ -1.1
XPA-203ENST00000485042 ARID3AQ99856 593 aa8.18□□□□□ -1.1
XPA-203ENST00000485042 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
XPA-203ENST00000485042 C6orf132Q5T0Z8 1188 aa8.17□□□□□ -1.1
XPA-203ENST00000485042 PADI6Q6TGC4 694 aa8.17□□□□□ -1.1
XPA-203ENST00000485042 METTL3Q86U44 580 aaKnown RBP8.17□□□□□ -1.1
XPA-203ENST00000485042 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
XPA-203ENST00000485042 TK2O00142 265 aa8.16□□□□□ -1.1
XPA-203ENST00000485042 ONECUT3O60422 494 aaPredicted RBP8.16□□□□□ -1.1
XPA-203ENST00000485042 UBTFP17480 764 aaKnown RBP8.16□□□□□ -1.1
XPA-203ENST00000485042 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
XPA-203ENST00000485042 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
XPA-203ENST00000485042 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
XPA-203ENST00000485042 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
XPA-203ENST00000485042 APBB1O00213 710 aa8.15□□□□□ -1.1
XPA-203ENST00000485042 HRO43593 1189 aa8.15□□□□□ -1.1
XPA-203ENST00000485042 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
XPA-203ENST00000485042 KDM4FA0A1W2PPD8 638 aa8.14□□□□□ -1.11
XPA-203ENST00000485042 PSDA5PKW4 1024 aaPredicted RBP8.14□□□□□ -1.11
XPA-203ENST00000485042 PXYLP1Q8TE99 480 aa8.14□□□□□ -1.11
XPA-203ENST00000485042 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
XPA-203ENST00000485042 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
XPA-203ENST00000485042 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
XPA-203ENST00000485042 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
XPA-203ENST00000485042 DMRTA1Q5VZB9 504 aa8.12□□□□□ -1.11
XPA-203ENST00000485042 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
XPA-203ENST00000485042 KCTD12Q96CX2 325 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms