RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 DEPDC5O75140 1603 aa20.64■□□□□ 0.89
SFXN2-203ENST00000480358 KDM5DQ9BY66 1539 aa20.63■□□□□ 0.89
SFXN2-203ENST00000480358 NUP155O75694 1391 aa20.62■□□□□ 0.89
SFXN2-203ENST00000480358 CCER1Q8TC90 406 aaPredicted RBP20.62■□□□□ 0.89
SFXN2-203ENST00000480358 RNF17Q9BXT8 1623 aaKnown RBP20.61■□□□□ 0.89
SFXN2-203ENST00000480358 AGLP35573 1532 aa20.6■□□□□ 0.89
SFXN2-203ENST00000480358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.899e-8■□□□□ 10.2
SFXN2-203ENST00000480358 PRDM15P57071 1507 aaPredicted RBP20.59■□□□□ 0.89
SFXN2-203ENST00000480358 PZPP20742 1482 aa20.59■□□□□ 0.89
SFXN2-203ENST00000480358 MROH1Q8NDA8 1641 aa20.58■□□□□ 0.89
SFXN2-203ENST00000480358 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.89
SFXN2-203ENST00000480358 IQGAP3Q86VI3 1631 aa20.58■□□□□ 0.89
SFXN2-203ENST00000480358 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
SFXN2-203ENST00000480358 SIGLEC1Q9BZZ2 1709 aa20.57■□□□□ 0.88
SFXN2-203ENST00000480358 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
SFXN2-203ENST00000480358 KANK1Q14678 1352 aa20.56■□□□□ 0.88
SFXN2-203ENST00000480358 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
SFXN2-203ENST00000480358 GGT6Q6P531 493 aa20.55■□□□□ 0.88
SFXN2-203ENST00000480358 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.87
SFXN2-203ENST00000480358 ARID4BQ4LE39 1312 aaPredicted RBP20.49■□□□□ 0.87
SFXN2-203ENST00000480358 PKD2Q13563 968 aa20.49■□□□□ 0.87
SFXN2-203ENST00000480358 LMTK2Q8IWU2 1503 aa20.49■□□□□ 0.87
SFXN2-203ENST00000480358 TET3O43151 1660 aa20.48■□□□□ 0.87
SFXN2-203ENST00000480358 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
SFXN2-203ENST00000480358 ZC3H13Q5T200 1668 aaKnown RBP20.47■□□□□ 0.87
SFXN2-203ENST00000480358 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
SFXN2-203ENST00000480358 CEP152O94986 1710 aa20.47■□□□□ 0.87
SFXN2-203ENST00000480358 ABCC3O15438 1527 aa20.47■□□□□ 0.87
SFXN2-203ENST00000480358 FOXD1Q16676 465 aa20.45■□□□□ 0.86
SFXN2-203ENST00000480358 MLECQ14165 292 aa20.44■□□□□ 0.86
SFXN2-203ENST00000480358 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
SFXN2-203ENST00000480358 E9PCH4 1651 aa20.43■□□□□ 0.86
SFXN2-203ENST00000480358 CAMSAP1Q5T5Y3 1602 aa20.41■□□□□ 0.86
SFXN2-203ENST00000480358 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
SFXN2-203ENST00000480358 RPRD2Q5VT52 1461 aaKnown RBP20.39■□□□□ 0.85
SFXN2-203ENST00000480358 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
SFXN2-203ENST00000480358 ESF1Q9H501 851 aaKnown RBP20.37■□□□□ 0.85
SFXN2-203ENST00000480358 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
SFXN2-203ENST00000480358 NPATQ14207 1427 aa20.36■□□□□ 0.85
SFXN2-203ENST00000480358 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
SFXN2-203ENST00000480358 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
SFXN2-203ENST00000480358 SPHKAPQ2M3C7 1700 aa20.34■□□□□ 0.85
SFXN2-203ENST00000480358 PTPRTO14522 1441 aa20.33■□□□□ 0.85
SFXN2-203ENST00000480358 PLA2R1Q13018 1463 aa20.33■□□□□ 0.85
SFXN2-203ENST00000480358 ZEB1P37275 1124 aaPredicted RBP20.32■□□□□ 0.84
SFXN2-203ENST00000480358 FER1L4A9Z1Z3 1794 aa20.32■□□□□ 0.84
SFXN2-203ENST00000480358 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
SFXN2-203ENST00000480358 MROH2AA6NES4 1674 aa20.31■□□□□ 0.84
SFXN2-203ENST00000480358 TRPM2O94759 1503 aa20.31■□□□□ 0.84
SFXN2-203ENST00000480358 CCDC144AA2RUR9 1427 aa20.29■□□□□ 0.84
SFXN2-203ENST00000480358 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
SFXN2-203ENST00000480358 ZMYM3Q14202 1370 aa20.29■□□□□ 0.84
SFXN2-203ENST00000480358 ADAMTSL3P82987 1691 aa20.27■□□□□ 0.84
SFXN2-203ENST00000480358 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.84
SFXN2-203ENST00000480358 NOS1P29475 1434 aa20.27■□□□□ 0.84
SFXN2-203ENST00000480358 MADDQ8WXG6 1647 aa20.26■□□□□ 0.83
SFXN2-203ENST00000480358 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
SFXN2-203ENST00000480358 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
SFXN2-203ENST00000480358 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
SFXN2-203ENST00000480358 SYNMO15061 1565 aa20.23■□□□□ 0.83
SFXN2-203ENST00000480358 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
SFXN2-203ENST00000480358 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
SFXN2-203ENST00000480358 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
SFXN2-203ENST00000480358 C3P01024 1663 aa20.22■□□□□ 0.83
SFXN2-203ENST00000480358 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
SFXN2-203ENST00000480358 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
SFXN2-203ENST00000480358 PIK3C2BO00750 1634 aa20.2■□□□□ 0.82
SFXN2-203ENST00000480358 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
SFXN2-203ENST00000480358 KIF1BO60333 1816 aa20.17■□□□□ 0.82
SFXN2-203ENST00000480358 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
SFXN2-203ENST00000480358 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
SFXN2-203ENST00000480358 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
SFXN2-203ENST00000480358 IDI1Q13907 227 aa20.14■□□□□ 0.81
SFXN2-203ENST00000480358 TNRQ92752 1358 aa20.14■□□□□ 0.81
SFXN2-203ENST00000480358 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.81
SFXN2-203ENST00000480358 ADGRB3O60242 1522 aa20.11■□□□□ 0.81
SFXN2-203ENST00000480358 RGL3Q3MIN7 710 aa20.11■□□□□ 0.81
SFXN2-203ENST00000480358 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
SFXN2-203ENST00000480358 PTPRMP28827 1452 aa20.1■□□□□ 0.81
SFXN2-203ENST00000480358 CHGAP10645 457 aaKnown RBP20.09■□□□□ 0.81
SFXN2-203ENST00000480358 PPP1R15AO75807 674 aaPredicted RBP20.08■□□□□ 0.81
SFXN2-203ENST00000480358 TMEM131LA2VDJ0 1609 aa20.08■□□□□ 0.8
SFXN2-203ENST00000480358 NLRP1Q9C000 1473 aa20.08■□□□□ 0.8
SFXN2-203ENST00000480358 DCAF11Q8TEB1 546 aa20.06■□□□□ 0.8
SFXN2-203ENST00000480358 KDM5AP29375 1690 aaKnown RBP20.04■□□□□ 0.8
SFXN2-203ENST00000480358 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
SFXN2-203ENST00000480358 MYO5BQ9ULV0 1848 aa20.04■□□□□ 0.8
SFXN2-203ENST00000480358 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
SFXN2-203ENST00000480358 ZNF326Q5BKZ1 582 aaKnown RBP20.04■□□□□ 0.8
SFXN2-203ENST00000480358 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
SFXN2-203ENST00000480358 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
SFXN2-203ENST00000480358 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
SFXN2-203ENST00000480358 SETD1BQ9UPS6 1966 aaKnown RBP20.02■□□□□ 0.8
SFXN2-203ENST00000480358 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.79
SFXN2-203ENST00000480358 IFT172Q9UG01 1749 aa20.02■□□□□ 0.79
SFXN2-203ENST00000480358 A2ML1A8K2U0 1454 aa20.01■□□□□ 0.79
SFXN2-203ENST00000480358 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
SFXN2-203ENST00000480358 PPLO60437 1756 aa20■□□□□ 0.79
SFXN2-203ENST00000480358 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
SFXN2-203ENST00000480358 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms