RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PIP4K2BP78356 416 aa26.69■■□□□ 1.86
APOBEC3F-203ENST00000476513 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
APOBEC3F-203ENST00000476513 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
APOBEC3F-203ENST00000476513 TOM1O60784 492 aa26.67■■□□□ 1.86
APOBEC3F-203ENST00000476513 CPS1P31327 1500 aa26.66■■□□□ 1.86
APOBEC3F-203ENST00000476513 KIF3BO15066 747 aa26.66■■□□□ 1.86
APOBEC3F-203ENST00000476513 SHANK2Q9UPX8 1470 aa26.66■■□□□ 1.86
APOBEC3F-203ENST00000476513 MED1Q15648 1581 aaPredicted RBP26.63■■□□□ 1.85
APOBEC3F-203ENST00000476513 PZPP20742 1482 aa26.63■■□□□ 1.85
APOBEC3F-203ENST00000476513 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
APOBEC3F-203ENST00000476513 ANKLE2Q86XL3 938 aa26.61■■□□□ 1.85
APOBEC3F-203ENST00000476513 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
APOBEC3F-203ENST00000476513 KDM5DQ9BY66 1539 aa26.6■■□□□ 1.85
APOBEC3F-203ENST00000476513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.6■■□□□ 1.85
APOBEC3F-203ENST00000476513 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
APOBEC3F-203ENST00000476513 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
APOBEC3F-203ENST00000476513 THEMISQ8N1K5 641 aaPredicted RBP26.58■■□□□ 1.85
APOBEC3F-203ENST00000476513 FAM135AQ9P2D6 1515 aa26.58■■□□□ 1.85
APOBEC3F-203ENST00000476513 VWDEQ8N2E2 1590 aa26.57■■□□□ 1.84
APOBEC3F-203ENST00000476513 MIA2Q96PC5 1412 aa26.56■■□□□ 1.84
APOBEC3F-203ENST00000476513 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
APOBEC3F-203ENST00000476513 NPHP4O75161 1426 aaPredicted RBP26.54■■□□□ 1.84
APOBEC3F-203ENST00000476513 NLRP1Q9C000 1473 aa26.54■■□□□ 1.84
APOBEC3F-203ENST00000476513 MED14O60244 1454 aa26.53■■□□□ 1.84
APOBEC3F-203ENST00000476513 RSPH4AQ5TD94 716 aa26.52■■□□□ 1.84
APOBEC3F-203ENST00000476513 UGGT1Q9NYU2 1555 aa26.52■■□□□ 1.84
APOBEC3F-203ENST00000476513 ALKQ9UM73 1620 aa26.51■■□□□ 1.83
APOBEC3F-203ENST00000476513 CAMSAP2Q08AD1 1489 aa26.51■■□□□ 1.83
APOBEC3F-203ENST00000476513 DEPDC5O75140 1603 aa26.49■■□□□ 1.83
APOBEC3F-203ENST00000476513 NCOA2Q15596 1464 aa26.48■■□□□ 1.83
APOBEC3F-203ENST00000476513 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
APOBEC3F-203ENST00000476513 TSPY4P0CV99 314 aa26.42■■□□□ 1.82
APOBEC3F-203ENST00000476513 TSPY10P0CW01 314 aa26.42■■□□□ 1.82
APOBEC3F-203ENST00000476513 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
APOBEC3F-203ENST00000476513 LRRC7Q96NW7 1537 aa26.41■■□□□ 1.82
APOBEC3F-203ENST00000476513 ARHGEF5Q12774 1597 aa26.41■■□□□ 1.82
APOBEC3F-203ENST00000476513 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
APOBEC3F-203ENST00000476513 ABCC3O15438 1527 aa26.39■■□□□ 1.81
APOBEC3F-203ENST00000476513 STRCP1A6NGW2 1772 aa26.37■■□□□ 1.81
APOBEC3F-203ENST00000476513 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
APOBEC3F-203ENST00000476513 RNF17Q9BXT8 1623 aaKnown RBP26.36■■□□□ 1.81
APOBEC3F-203ENST00000476513 SYNMO15061 1565 aa26.32■■□□□ 1.8
APOBEC3F-203ENST00000476513 ZC3H13Q5T200 1668 aaKnown RBP26.31■■□□□ 1.8
APOBEC3F-203ENST00000476513 MAST1Q9Y2H9 1570 aa26.29■■□□□ 1.8
APOBEC3F-203ENST00000476513 SCAF11Q99590 1463 aaKnown RBP26.27■■□□□ 1.8
APOBEC3F-203ENST00000476513 MROH1Q8NDA8 1641 aa26.27■■□□□ 1.8
APOBEC3F-203ENST00000476513 LTKP29376 864 aa26.26■■□□□ 1.79
APOBEC3F-203ENST00000476513 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
APOBEC3F-203ENST00000476513 RGS17Q9UGC6 210 aaPredicted RBP26.24■■□□□ 1.79
APOBEC3F-203ENST00000476513 UBR1Q8IWV7 1749 aa26.24■■□□□ 1.79
APOBEC3F-203ENST00000476513 TXNDC2Q86VQ3 553 aa26.23■■□□□ 1.79
APOBEC3F-203ENST00000476513 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
APOBEC3F-203ENST00000476513 LRRC9Q6ZRR7 1453 aa26.22■■□□□ 1.79
APOBEC3F-203ENST00000476513 SLIT1O75093 1534 aa26.2■■□□□ 1.79
APOBEC3F-203ENST00000476513 CEP152O94986 1710 aa26.19■■□□□ 1.78
APOBEC3F-203ENST00000476513 ARHGAP31Q2M1Z3 1444 aa26.16■■□□□ 1.78
APOBEC3F-203ENST00000476513 DUOX2Q9NRD8 1548 aa26.16■■□□□ 1.78
APOBEC3F-203ENST00000476513 EID1Q9Y6B2 187 aa26.16■■□□□ 1.78
APOBEC3F-203ENST00000476513 CFAP65Q6ZU64 1925 aaKnown RBP26.16■■□□□ 1.78
APOBEC3F-203ENST00000476513 FAM135BQ49AJ0 1406 aa26.14■■□□□ 1.77
APOBEC3F-203ENST00000476513 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
APOBEC3F-203ENST00000476513 XIRP1Q702N8 1843 aaKnown RBP26.13■■□□□ 1.77
APOBEC3F-203ENST00000476513 MYOM3Q5VTT5 1437 aa26.13■■□□□ 1.77
APOBEC3F-203ENST00000476513 VPS8Q8N3P4 1428 aa26.12■■□□□ 1.77
APOBEC3F-203ENST00000476513 TMEM2Q9UHN6 1383 aa26.11■■□□□ 1.77
APOBEC3F-203ENST00000476513 PRDM15P57071 1507 aaPredicted RBP26.11■■□□□ 1.77
APOBEC3F-203ENST00000476513 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
APOBEC3F-203ENST00000476513 TMEM94Q12767 1356 aa26.08■■□□□ 1.77
APOBEC3F-203ENST00000476513 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
APOBEC3F-203ENST00000476513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.07■■□□□ 1.76
APOBEC3F-203ENST00000476513 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
APOBEC3F-203ENST00000476513 POTEAQ6S8J7 498 aa26.06■■□□□ 1.76
APOBEC3F-203ENST00000476513 RRP7BPQ9NSQ0 103 aa26.06■■□□□ 1.76
APOBEC3F-203ENST00000476513 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
APOBEC3F-203ENST00000476513 KCNA6P17658 529 aa26.05■■□□□ 1.76
APOBEC3F-203ENST00000476513 ABCC5O15440 1437 aa26.04■■□□□ 1.76
APOBEC3F-203ENST00000476513 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
APOBEC3F-203ENST00000476513 IDI1Q13907 227 aa26.02■■□□□ 1.76
APOBEC3F-203ENST00000476513 EFCAB6Q5THR3 1501 aa26.01■■□□□ 1.75
APOBEC3F-203ENST00000476513 PROSER2Q86WR7 435 aaPredicted RBP26.01■■□□□ 1.75
APOBEC3F-203ENST00000476513 SLC26A8Q96RN1 970 aa26.01■■□□□ 1.75
APOBEC3F-203ENST00000476513 KANK1Q14678 1352 aa26■■□□□ 1.75
APOBEC3F-203ENST00000476513 RBM33Q96EV2 1170 aaKnown RBP26■■□□□ 1.75
APOBEC3F-203ENST00000476513 TET3O43151 1660 aa25.97■■□□□ 1.75
APOBEC3F-203ENST00000476513 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
APOBEC3F-203ENST00000476513 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
APOBEC3F-203ENST00000476513 CROCC2H7BZ55 1655 aa25.95■■□□□ 1.74
APOBEC3F-203ENST00000476513 LMTK2Q8IWU2 1503 aa25.94■■□□□ 1.74
APOBEC3F-203ENST00000476513 DAPK1P53355 1430 aa25.94■■□□□ 1.74
APOBEC3F-203ENST00000476513 LOC105371045A0A1W2PR82 267 aa25.92■■□□□ 1.74
APOBEC3F-203ENST00000476513 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
APOBEC3F-203ENST00000476513 NOS1P29475 1434 aa25.91■■□□□ 1.74
APOBEC3F-203ENST00000476513 PTPN23Q9H3S7 1636 aa25.91■■□□□ 1.74
APOBEC3F-203ENST00000476513 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
APOBEC3F-203ENST00000476513 MSH6P52701 1360 aa25.89■■□□□ 1.74
APOBEC3F-203ENST00000476513 ANKRD30AQ9BXX3 1397 aa25.88■■□□□ 1.73
APOBEC3F-203ENST00000476513 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
APOBEC3F-203ENST00000476513 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
APOBEC3F-203ENST00000476513 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
APOBEC3F-203ENST00000476513 BCANQ96GW7 911 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms