RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 GGT6Q6P531 493 aa19.02■□□□□ 0.64
HLA-F-224ENST00000475996 AGLP35573 1532 aa19.01■□□□□ 0.63
HLA-F-224ENST00000475996 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
HLA-F-224ENST00000475996 HRCP23327 699 aa19■□□□□ 0.63
HLA-F-224ENST00000475996 MLECQ14165 292 aa19■□□□□ 0.63
HLA-F-224ENST00000475996 UNC13BO14795 1591 aa19■□□□□ 0.63
HLA-F-224ENST00000475996 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
HLA-F-224ENST00000475996 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
HLA-F-224ENST00000475996 NUP155O75694 1391 aa18.99■□□□□ 0.63
HLA-F-224ENST00000475996 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
HLA-F-224ENST00000475996 PRDM15P57071 1507 aaPredicted RBP18.96■□□□□ 0.63
HLA-F-224ENST00000475996 KANK1Q14678 1352 aa18.94■□□□□ 0.62
HLA-F-224ENST00000475996 KDM5DQ9BY66 1539 aa18.94■□□□□ 0.62
HLA-F-224ENST00000475996 CEP152O94986 1710 aa18.93■□□□□ 0.62
HLA-F-224ENST00000475996 PZPP20742 1482 aa18.93■□□□□ 0.62
HLA-F-224ENST00000475996 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
HLA-F-224ENST00000475996 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
HLA-F-224ENST00000475996 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
HLA-F-224ENST00000475996 FAM135AQ9P2D6 1515 aa18.92■□□□□ 0.62
HLA-F-224ENST00000475996 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
HLA-F-224ENST00000475996 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
HLA-F-224ENST00000475996 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
HLA-F-224ENST00000475996 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.62
HLA-F-224ENST00000475996 ABCC3O15438 1527 aa18.89■□□□□ 0.61
HLA-F-224ENST00000475996 CLTCQ00610 1675 aaKnown RBP18.86■□□□□ 0.61
HLA-F-224ENST00000475996 PKD2Q13563 968 aa18.86■□□□□ 0.61
HLA-F-224ENST00000475996 FOXD1Q16676 465 aa18.86■□□□□ 0.61
HLA-F-224ENST00000475996 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
HLA-F-224ENST00000475996 ESF1Q9H501 851 aaKnown RBP18.85■□□□□ 0.61
HLA-F-224ENST00000475996 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
HLA-F-224ENST00000475996 TET3O43151 1660 aa18.85■□□□□ 0.61
HLA-F-224ENST00000475996 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
HLA-F-224ENST00000475996 FER1L4A9Z1Z3 1794 aa18.84■□□□□ 0.61
HLA-F-224ENST00000475996 CAMSAP1Q5T5Y3 1602 aa18.83■□□□□ 0.61
HLA-F-224ENST00000475996 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
HLA-F-224ENST00000475996 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.6
HLA-F-224ENST00000475996 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
HLA-F-224ENST00000475996 MADDQ8WXG6 1647 aa18.81■□□□□ 0.6
HLA-F-224ENST00000475996 E9PCH4 1651 aa18.81■□□□□ 0.6
HLA-F-224ENST00000475996 ADAMTSL3P82987 1691 aa18.81■□□□□ 0.6
HLA-F-224ENST00000475996 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
HLA-F-224ENST00000475996 NPATQ14207 1427 aa18.78■□□□□ 0.6
HLA-F-224ENST00000475996 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
HLA-F-224ENST00000475996 ZMYM3Q14202 1370 aa18.77■□□□□ 0.6
HLA-F-224ENST00000475996 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
HLA-F-224ENST00000475996 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
HLA-F-224ENST00000475996 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
HLA-F-224ENST00000475996 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
HLA-F-224ENST00000475996 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
HLA-F-224ENST00000475996 SPHKAPQ2M3C7 1700 aa18.73■□□□□ 0.59
HLA-F-224ENST00000475996 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
HLA-F-224ENST00000475996 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
HLA-F-224ENST00000475996 C3P01024 1663 aa18.72■□□□□ 0.59
HLA-F-224ENST00000475996 PREX1Q8TCU6 1659 aa18.72■□□□□ 0.59
HLA-F-224ENST00000475996 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
HLA-F-224ENST00000475996 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
HLA-F-224ENST00000475996 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
HLA-F-224ENST00000475996 PTPRTO14522 1441 aa18.69■□□□□ 0.58
HLA-F-224ENST00000475996 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
HLA-F-224ENST00000475996 NOS1P29475 1434 aa18.68■□□□□ 0.58
HLA-F-224ENST00000475996 SYNMO15061 1565 aa18.67■□□□□ 0.58
HLA-F-224ENST00000475996 TRPM2O94759 1503 aa18.67■□□□□ 0.58
HLA-F-224ENST00000475996 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
HLA-F-224ENST00000475996 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
HLA-F-224ENST00000475996 PTPRMP28827 1452 aa18.66■□□□□ 0.58
HLA-F-224ENST00000475996 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
HLA-F-224ENST00000475996 UGGT1Q9NYU2 1555 aa18.66■□□□□ 0.58
HLA-F-224ENST00000475996 CLTCL1P53675 1640 aa18.65■□□□□ 0.58
HLA-F-224ENST00000475996 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
HLA-F-224ENST00000475996 TNRQ92752 1358 aa18.63■□□□□ 0.57
HLA-F-224ENST00000475996 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
HLA-F-224ENST00000475996 IDI1Q13907 227 aa18.59■□□□□ 0.57
HLA-F-224ENST00000475996 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
HLA-F-224ENST00000475996 SLC52A1Q9NWF4 448 aa18.58■□□□□ 0.56
HLA-F-224ENST00000475996 KIF1BO60333 1816 aa18.57■□□□□ 0.56
HLA-F-224ENST00000475996 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
HLA-F-224ENST00000475996 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
HLA-F-224ENST00000475996 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
HLA-F-224ENST00000475996 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
HLA-F-224ENST00000475996 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
HLA-F-224ENST00000475996 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
HLA-F-224ENST00000475996 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
HLA-F-224ENST00000475996 ADGRB3O60242 1522 aa18.52■□□□□ 0.55
HLA-F-224ENST00000475996 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
HLA-F-224ENST00000475996 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
HLA-F-224ENST00000475996 ZNF326Q5BKZ1 582 aaKnown RBP18.5■□□□□ 0.55
HLA-F-224ENST00000475996 UBR1Q8IWV7 1749 aa18.48■□□□□ 0.55
HLA-F-224ENST00000475996 A2ML1A8K2U0 1454 aa18.48■□□□□ 0.55
HLA-F-224ENST00000475996 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
HLA-F-224ENST00000475996 L3MBTL2Q969R5 705 aa18.48■□□□□ 0.55
HLA-F-224ENST00000475996 CEP170BQ9Y4F5 1589 aaPredicted RBP18.48■□□□□ 0.55
HLA-F-224ENST00000475996 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
HLA-F-224ENST00000475996 ZNF142P52746 1687 aaPredicted RBP18.46■□□□□ 0.55
HLA-F-224ENST00000475996 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
HLA-F-224ENST00000475996 DCAF11Q8TEB1 546 aa18.44■□□□□ 0.54
HLA-F-224ENST00000475996 KDM5AP29375 1690 aaKnown RBP18.44■□□□□ 0.54
HLA-F-224ENST00000475996 NUTM2DQ5VT03 806 aaPredicted RBP18.43■□□□□ 0.54
HLA-F-224ENST00000475996 TIMELESSQ9UNS1 1208 aa18.42■□□□□ 0.54
HLA-F-224ENST00000475996 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
HLA-F-224ENST00000475996 PPLO60437 1756 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms