RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
TRIM13-207ENST00000474805 CPS1P31327 1500 aa20.18■□□□□ 0.82
TRIM13-207ENST00000474805 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
TRIM13-207ENST00000474805 MBD5Q9P267 1494 aa20.18■□□□□ 0.82
TRIM13-207ENST00000474805 TNRQ92752 1358 aa20.17■□□□□ 0.82
TRIM13-207ENST00000474805 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
TRIM13-207ENST00000474805 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
TRIM13-207ENST00000474805 KIF3BO15066 747 aa20.15■□□□□ 0.82
TRIM13-207ENST00000474805 RTEL1-TNFRSF6BF6WH68 1400 aa20.14■□□□□ 0.81
TRIM13-207ENST00000474805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM13-207ENST00000474805 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
TRIM13-207ENST00000474805 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
TRIM13-207ENST00000474805 PZPP20742 1482 aa20.11■□□□□ 0.81
TRIM13-207ENST00000474805 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
TRIM13-207ENST00000474805 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
TRIM13-207ENST00000474805 KDM5DQ9BY66 1539 aa20.1■□□□□ 0.81
TRIM13-207ENST00000474805 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
TRIM13-207ENST00000474805 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
TRIM13-207ENST00000474805 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
TRIM13-207ENST00000474805 MIA2Q96PC5 1412 aa20.08■□□□□ 0.8
TRIM13-207ENST00000474805 NPHP4O75161 1426 aaPredicted RBP20.07■□□□□ 0.8
TRIM13-207ENST00000474805 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
TRIM13-207ENST00000474805 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
TRIM13-207ENST00000474805 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
TRIM13-207ENST00000474805 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
TRIM13-207ENST00000474805 MED14O60244 1454 aa20.05■□□□□ 0.8
TRIM13-207ENST00000474805 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
TRIM13-207ENST00000474805 IQGAP1P46940 1657 aa20.04■□□□□ 0.8
TRIM13-207ENST00000474805 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
TRIM13-207ENST00000474805 CCDC141Q6ZP82 1450 aa20.04■□□□□ 0.8
TRIM13-207ENST00000474805 CEP162Q5TB80 1403 aa20.03■□□□□ 0.8
TRIM13-207ENST00000474805 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.8
TRIM13-207ENST00000474805 CFAP65Q6ZU64 1925 aaKnown RBP20.01■□□□□ 0.79
TRIM13-207ENST00000474805 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
TRIM13-207ENST00000474805 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
TRIM13-207ENST00000474805 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
TRIM13-207ENST00000474805 TSPY4P0CV99 314 aa19.96■□□□□ 0.79
TRIM13-207ENST00000474805 TSPY10P0CW01 314 aa19.96■□□□□ 0.79
TRIM13-207ENST00000474805 RNF17Q9BXT8 1623 aaKnown RBP19.95■□□□□ 0.78
TRIM13-207ENST00000474805 SYNMO15061 1565 aa19.94■□□□□ 0.78
TRIM13-207ENST00000474805 ARHGEF5Q12774 1597 aa19.94■□□□□ 0.78
TRIM13-207ENST00000474805 ZC3H13Q5T200 1668 aaKnown RBP19.94■□□□□ 0.78
TRIM13-207ENST00000474805 ABCC3O15438 1527 aa19.93■□□□□ 0.78
TRIM13-207ENST00000474805 UBR1Q8IWV7 1749 aa19.91■□□□□ 0.78
TRIM13-207ENST00000474805 RGS17Q9UGC6 210 aaPredicted RBP19.91■□□□□ 0.78
TRIM13-207ENST00000474805 ERVK-7P63135 1459 aa19.9■□□□□ 0.78
TRIM13-207ENST00000474805 CEP152O94986 1710 aa19.9■□□□□ 0.78
TRIM13-207ENST00000474805 XIRP1Q702N8 1843 aaKnown RBP19.9■□□□□ 0.78
TRIM13-207ENST00000474805 LTKP29376 864 aa19.87■□□□□ 0.77
TRIM13-207ENST00000474805 MROH1Q8NDA8 1641 aa19.86■□□□□ 0.77
TRIM13-207ENST00000474805 SCAF11Q99590 1463 aaKnown RBP19.86■□□□□ 0.77
TRIM13-207ENST00000474805 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
TRIM13-207ENST00000474805 TXNDC2Q86VQ3 553 aa19.85■□□□□ 0.77
TRIM13-207ENST00000474805 MAST1Q9Y2H9 1570 aa19.85■□□□□ 0.77
TRIM13-207ENST00000474805 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
TRIM13-207ENST00000474805 SLIT1O75093 1534 aa19.8■□□□□ 0.76
TRIM13-207ENST00000474805 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
TRIM13-207ENST00000474805 POTEAQ6S8J7 498 aa19.77■□□□□ 0.76
TRIM13-207ENST00000474805 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.76
TRIM13-207ENST00000474805 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
TRIM13-207ENST00000474805 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
TRIM13-207ENST00000474805 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
TRIM13-207ENST00000474805 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
TRIM13-207ENST00000474805 ARHGAP31Q2M1Z3 1444 aa19.73■□□□□ 0.75
TRIM13-207ENST00000474805 TMEM94Q12767 1356 aa19.72■□□□□ 0.75
TRIM13-207ENST00000474805 TMEM2Q9UHN6 1383 aa19.72■□□□□ 0.75
TRIM13-207ENST00000474805 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
TRIM13-207ENST00000474805 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-207ENST00000474805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
TRIM13-207ENST00000474805 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
TRIM13-207ENST00000474805 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
TRIM13-207ENST00000474805 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
TRIM13-207ENST00000474805 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
TRIM13-207ENST00000474805 KCNA6P17658 529 aa19.69■□□□□ 0.74
TRIM13-207ENST00000474805 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
TRIM13-207ENST00000474805 SLC26A8Q96RN1 970 aa19.69■□□□□ 0.74
TRIM13-207ENST00000474805 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
TRIM13-207ENST00000474805 IDI1Q13907 227 aa19.67■□□□□ 0.74
TRIM13-207ENST00000474805 MAP3K1Q13233 1512 aa19.66■□□□□ 0.74
TRIM13-207ENST00000474805 EFCAB6Q5THR3 1501 aa19.66■□□□□ 0.74
TRIM13-207ENST00000474805 TET3O43151 1660 aa19.66■□□□□ 0.74
TRIM13-207ENST00000474805 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
TRIM13-207ENST00000474805 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
TRIM13-207ENST00000474805 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
TRIM13-207ENST00000474805 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
TRIM13-207ENST00000474805 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
TRIM13-207ENST00000474805 ABCC5O15440 1437 aa19.63■□□□□ 0.73
TRIM13-207ENST00000474805 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
TRIM13-207ENST00000474805 KANK1Q14678 1352 aa19.62■□□□□ 0.73
TRIM13-207ENST00000474805 BCANQ96GW7 911 aa19.61■□□□□ 0.73
TRIM13-207ENST00000474805 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
TRIM13-207ENST00000474805 MSH6P52701 1360 aa19.58■□□□□ 0.73
TRIM13-207ENST00000474805 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.73
TRIM13-207ENST00000474805 NWD1Q149M9 1564 aa19.58■□□□□ 0.73
TRIM13-207ENST00000474805 NKTRP30414 1462 aaKnown RBP19.58■□□□□ 0.72
TRIM13-207ENST00000474805 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
TRIM13-207ENST00000474805 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
TRIM13-207ENST00000474805 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
TRIM13-207ENST00000474805 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
TRIM13-207ENST00000474805 DAPK1P53355 1430 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms