RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
SNX13-205ENST00000471744 PTPRMP28827 1452 aa22.97■■□□□ 1.27
SNX13-205ENST00000471744 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
SNX13-205ENST00000471744 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
SNX13-205ENST00000471744 GGT6Q6P531 493 aa22.95■■□□□ 1.26
SNX13-205ENST00000471744 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
SNX13-205ENST00000471744 ITGAEP38570 1179 aa22.93■■□□□ 1.26
SNX13-205ENST00000471744 ANKRD50Q9ULJ7 1429 aa22.9■■□□□ 1.26
SNX13-205ENST00000471744 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
SNX13-205ENST00000471744 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
SNX13-205ENST00000471744 ZC3H13Q5T200 1668 aaKnown RBP22.87■■□□□ 1.25
SNX13-205ENST00000471744 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
SNX13-205ENST00000471744 SETD1BQ9UPS6 1966 aaKnown RBP22.86■■□□□ 1.25
SNX13-205ENST00000471744 C3P01024 1663 aa22.86■■□□□ 1.25
SNX13-205ENST00000471744 PRDM15P57071 1507 aaPredicted RBP22.86■■□□□ 1.25
SNX13-205ENST00000471744 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
SNX13-205ENST00000471744 WASHC2CQ9Y4E1 1318 aa22.83■■□□□ 1.25
SNX13-205ENST00000471744 GCC2Q8IWJ2 1684 aa22.82■■□□□ 1.24
SNX13-205ENST00000471744 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
SNX13-205ENST00000471744 KANK1Q14678 1352 aa22.82■■□□□ 1.24
SNX13-205ENST00000471744 ABCC3O15438 1527 aa22.8■■□□□ 1.24
SNX13-205ENST00000471744 HFM1A2PYH4 1435 aa22.78■■□□□ 1.24
SNX13-205ENST00000471744 CEP152O94986 1710 aa22.78■■□□□ 1.24
SNX13-205ENST00000471744 UNC13BO14795 1591 aa22.77■■□□□ 1.24
SNX13-205ENST00000471744 NPATQ14207 1427 aa22.77■■□□□ 1.24
SNX13-205ENST00000471744 PLPPR3Q6T4P5 718 aa22.77■■□□□ 1.24
SNX13-205ENST00000471744 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
SNX13-205ENST00000471744 NAIPQ13075 1403 aa22.76■■□□□ 1.23
SNX13-205ENST00000471744 CEBPAP49715 358 aaPredicted RBP22.76■■□□□ 1.23
SNX13-205ENST00000471744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX13-205ENST00000471744 CAMSAP1Q5T5Y3 1602 aa22.75■■□□□ 1.23
SNX13-205ENST00000471744 PZPP20742 1482 aa22.74■■□□□ 1.23
SNX13-205ENST00000471744 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
SNX13-205ENST00000471744 PREX1Q8TCU6 1659 aa22.73■■□□□ 1.23
SNX13-205ENST00000471744 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
SNX13-205ENST00000471744 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
SNX13-205ENST00000471744 TET3O43151 1660 aa22.68■■□□□ 1.22
SNX13-205ENST00000471744 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
SNX13-205ENST00000471744 CFAP65Q6ZU64 1925 aaKnown RBP22.67■■□□□ 1.22
SNX13-205ENST00000471744 FOXD1Q16676 465 aa22.67■■□□□ 1.22
SNX13-205ENST00000471744 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
SNX13-205ENST00000471744 EFCAB6Q5THR3 1501 aa22.66■■□□□ 1.22
SNX13-205ENST00000471744 NUP155O75694 1391 aa22.65■■□□□ 1.22
SNX13-205ENST00000471744 LMTK3Q96Q04 1460 aa22.64■■□□□ 1.21
SNX13-205ENST00000471744 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
SNX13-205ENST00000471744 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
SNX13-205ENST00000471744 TNRQ92752 1358 aa22.63■■□□□ 1.21
SNX13-205ENST00000471744 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
SNX13-205ENST00000471744 MYO3AQ8NEV4 1616 aa22.62■■□□□ 1.21
SNX13-205ENST00000471744 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
SNX13-205ENST00000471744 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
SNX13-205ENST00000471744 ZNF142P52746 1687 aaPredicted RBP22.6■■□□□ 1.21
SNX13-205ENST00000471744 NLRP1Q9C000 1473 aa22.58■■□□□ 1.2
SNX13-205ENST00000471744 CEP170BQ9Y4F5 1589 aaPredicted RBP22.56■■□□□ 1.2
SNX13-205ENST00000471744 E9PCH4 1651 aa22.55■■□□□ 1.2
SNX13-205ENST00000471744 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
SNX13-205ENST00000471744 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
SNX13-205ENST00000471744 NOS1P29475 1434 aa22.53■■□□□ 1.2
SNX13-205ENST00000471744 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
SNX13-205ENST00000471744 HRCP23327 699 aa22.49■■□□□ 1.19
SNX13-205ENST00000471744 SYNMO15061 1565 aa22.48■■□□□ 1.19
SNX13-205ENST00000471744 UGGT1Q9NYU2 1555 aa22.47■■□□□ 1.19
SNX13-205ENST00000471744 HSPA2P54652 639 aa22.47■■□□□ 1.19
SNX13-205ENST00000471744 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
SNX13-205ENST00000471744 SLC52A1Q9NWF4 448 aa22.47■■□□□ 1.19
SNX13-205ENST00000471744 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
SNX13-205ENST00000471744 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
SNX13-205ENST00000471744 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
SNX13-205ENST00000471744 PLA2R1Q13018 1463 aa22.45■■□□□ 1.18
SNX13-205ENST00000471744 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SNX13-205ENST00000471744 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
SNX13-205ENST00000471744 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
SNX13-205ENST00000471744 PKD2Q13563 968 aa22.42■■□□□ 1.18
SNX13-205ENST00000471744 PTPRTO14522 1441 aa22.41■■□□□ 1.18
SNX13-205ENST00000471744 IDI1Q13907 227 aa22.4■■□□□ 1.18
SNX13-205ENST00000471744 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
SNX13-205ENST00000471744 STAG3Q9UJ98 1225 aa22.39■■□□□ 1.17
SNX13-205ENST00000471744 STRCQ7RTU9 1775 aa22.39■■□□□ 1.17
SNX13-205ENST00000471744 TRPM2O94759 1503 aa22.38■■□□□ 1.17
SNX13-205ENST00000471744 ADGRB3O60242 1522 aa22.37■■□□□ 1.17
SNX13-205ENST00000471744 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
SNX13-205ENST00000471744 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
SNX13-205ENST00000471744 SLIT1O75093 1534 aa22.33■■□□□ 1.17
SNX13-205ENST00000471744 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
SNX13-205ENST00000471744 MYO5BQ9ULV0 1848 aa22.32■■□□□ 1.16
SNX13-205ENST00000471744 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
SNX13-205ENST00000471744 KIF1BO60333 1816 aa22.31■■□□□ 1.16
SNX13-205ENST00000471744 ARHGAP23Q9P227 1491 aa22.31■■□□□ 1.16
SNX13-205ENST00000471744 CLTCL1P53675 1640 aa22.3■■□□□ 1.16
SNX13-205ENST00000471744 TMEM2Q9UHN6 1383 aa22.29■■□□□ 1.16
SNX13-205ENST00000471744 NCKAP5LQ9HCH0 1330 aa22.28■■□□□ 1.16
SNX13-205ENST00000471744 EID1Q9Y6B2 187 aa22.27■■□□□ 1.16
SNX13-205ENST00000471744 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
SNX13-205ENST00000471744 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
SNX13-205ENST00000471744 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
SNX13-205ENST00000471744 MED14O60244 1454 aa22.26■■□□□ 1.15
SNX13-205ENST00000471744 NEURL4Q96JN8 1562 aa22.25■■□□□ 1.15
SNX13-205ENST00000471744 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
SNX13-205ENST00000471744 TXNDC2Q86VQ3 553 aa22.23■■□□□ 1.15
SNX13-205ENST00000471744 IQGAP1P46940 1657 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms