RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-205ENST00000470585 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.62
SF3A3-205ENST00000470585 MED14O60244 1454 aa11.14□□□□□ -0.63
SF3A3-205ENST00000470585 SHANK2Q9UPX8 1470 aa11.14□□□□□ -0.63
SF3A3-205ENST00000470585 CFDP1Q9UEE9 299 aaPredicted RBP11.14□□□□□ -0.63
SF3A3-205ENST00000470585 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
SF3A3-205ENST00000470585 DEPDC5O75140 1603 aa11.13□□□□□ -0.63
SF3A3-205ENST00000470585 PZPP20742 1482 aa11.13□□□□□ -0.63
SF3A3-205ENST00000470585 NLRP1Q9C000 1473 aa11.13□□□□□ -0.63
SF3A3-205ENST00000470585 DHX29Q7Z478 1369 aaKnown RBP11.13□□□□□ -0.63
SF3A3-205ENST00000470585 NEURL4Q96JN8 1562 aa11.12□□□□□ -0.63
SF3A3-205ENST00000470585 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.63
SF3A3-205ENST00000470585 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
SF3A3-205ENST00000470585 KDM5DQ9BY66 1539 aa11.12□□□□□ -0.63
SF3A3-205ENST00000470585 TNRQ92752 1358 aa11.12□□□□□ -0.63
SF3A3-205ENST00000470585 GGT6Q6P531 493 aa11.11□□□□□ -0.63
SF3A3-205ENST00000470585 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
SF3A3-205ENST00000470585 MBD5Q9P267 1494 aa11.11□□□□□ -0.63
SF3A3-205ENST00000470585 HSPA1LP34931 641 aa11.1□□□□□ -0.63
SF3A3-205ENST00000470585 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
SF3A3-205ENST00000470585 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-205ENST00000470585 VWDEQ8N2E2 1590 aa11.09□□□□□ -0.63
SF3A3-205ENST00000470585 MTUS2Q5JR59 1369 aa11.09□□□□□ -0.63
SF3A3-205ENST00000470585 SYNMO15061 1565 aa11.08□□□□□ -0.64
SF3A3-205ENST00000470585 EHBP1L1Q8N3D4 1523 aa11.08□□□□□ -0.64
SF3A3-205ENST00000470585 CEP162Q5TB80 1403 aa11.08□□□□□ -0.64
SF3A3-205ENST00000470585 MIA2Q96PC5 1412 aa11.08□□□□□ -0.64
SF3A3-205ENST00000470585 NPHP4O75161 1426 aaPredicted RBP11.07□□□□□ -0.64
SF3A3-205ENST00000470585 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
SF3A3-205ENST00000470585 UGGT1Q9NYU2 1555 aa11.07□□□□□ -0.64
SF3A3-205ENST00000470585 CCDC141Q6ZP82 1450 aa11.06□□□□□ -0.64
SF3A3-205ENST00000470585 RNF17Q9BXT8 1623 aaKnown RBP11.06□□□□□ -0.64
SF3A3-205ENST00000470585 ALKQ9UM73 1620 aa11.05□□□□□ -0.64
SF3A3-205ENST00000470585 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
SF3A3-205ENST00000470585 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
SF3A3-205ENST00000470585 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
SF3A3-205ENST00000470585 WASHC2CQ9Y4E1 1318 aa11.04□□□□□ -0.64
SF3A3-205ENST00000470585 KIF3BO15066 747 aa11.03□□□□□ -0.64
SF3A3-205ENST00000470585 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
SF3A3-205ENST00000470585 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
SF3A3-205ENST00000470585 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
SF3A3-205ENST00000470585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
SF3A3-205ENST00000470585 LRRC7Q96NW7 1537 aa11.01□□□□□ -0.65
SF3A3-205ENST00000470585 HOXD11P31277 338 aaPredicted RBP11.01□□□□□ -0.65
SF3A3-205ENST00000470585 EIF2AK4Q9P2K8 1649 aaKnown RBP11□□□□□ -0.65
SF3A3-205ENST00000470585 FBXO31Q5XUX0 539 aaPredicted RBP11□□□□□ -0.65
SF3A3-205ENST00000470585 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
SF3A3-205ENST00000470585 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
SF3A3-205ENST00000470585 ZNF644Q9H582 1327 aaPredicted RBP10.98□□□□□ -0.65
SF3A3-205ENST00000470585 ERVK-7P63135 1459 aa10.98□□□□□ -0.65
SF3A3-205ENST00000470585 ABCC3O15438 1527 aa10.98□□□□□ -0.65
SF3A3-205ENST00000470585 SLIT1O75093 1534 aa10.98□□□□□ -0.65
SF3A3-205ENST00000470585 MAST1Q9Y2H9 1570 aa10.98□□□□□ -0.65
SF3A3-205ENST00000470585 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
SF3A3-205ENST00000470585 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
SF3A3-205ENST00000470585 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
SF3A3-205ENST00000470585 SCAF11Q99590 1463 aaKnown RBP10.97□□□□□ -0.65
SF3A3-205ENST00000470585 ARHGAP23Q9P227 1491 aa10.97□□□□□ -0.65
SF3A3-205ENST00000470585 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
SF3A3-205ENST00000470585 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
SF3A3-205ENST00000470585 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
SF3A3-205ENST00000470585 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
SF3A3-205ENST00000470585 UBR1Q8IWV7 1749 aa10.94□□□□□ -0.66
SF3A3-205ENST00000470585 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
SF3A3-205ENST00000470585 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
SF3A3-205ENST00000470585 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
SF3A3-205ENST00000470585 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
SF3A3-205ENST00000470585 PRDM15P57071 1507 aaPredicted RBP10.9□□□□□ -0.66
SF3A3-205ENST00000470585 RGS17Q9UGC6 210 aaPredicted RBP10.9□□□□□ -0.66
SF3A3-205ENST00000470585 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
SF3A3-205ENST00000470585 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
SF3A3-205ENST00000470585 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
SF3A3-205ENST00000470585 MAP3K1Q13233 1512 aa10.89□□□□□ -0.67
SF3A3-205ENST00000470585 TMEM2Q9UHN6 1383 aa10.88□□□□□ -0.67
SF3A3-205ENST00000470585 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
SF3A3-205ENST00000470585 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
SF3A3-205ENST00000470585 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
SF3A3-205ENST00000470585 KCNA6P17658 529 aa10.86□□□□□ -0.67
SF3A3-205ENST00000470585 LTKP29376 864 aa10.86□□□□□ -0.67
SF3A3-205ENST00000470585 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
SF3A3-205ENST00000470585 NCOA3Q9Y6Q9 1424 aa10.85□□□□□ -0.67
SF3A3-205ENST00000470585 LMTK2Q8IWU2 1503 aa10.85□□□□□ -0.67
SF3A3-205ENST00000470585 CEP152O94986 1710 aa10.85□□□□□ -0.67
SF3A3-205ENST00000470585 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
SF3A3-205ENST00000470585 RNF216Q9NWF9 866 aaPredicted RBP10.85□□□□□ -0.67
SF3A3-205ENST00000470585 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
SF3A3-205ENST00000470585 TMEM94Q12767 1356 aa10.84□□□□□ -0.67
SF3A3-205ENST00000470585 TET3O43151 1660 aa10.84□□□□□ -0.67
SF3A3-205ENST00000470585 ROBO1Q9Y6N7 1651 aa10.83□□□□□ -0.68
SF3A3-205ENST00000470585 KANK1Q14678 1352 aa10.83□□□□□ -0.68
SF3A3-205ENST00000470585 JCADQ9P266 1359 aa10.83□□□□□ -0.68
SF3A3-205ENST00000470585 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
SF3A3-205ENST00000470585 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
SF3A3-205ENST00000470585 KIF15Q9NS87 1388 aa10.82□□□□□ -0.68
SF3A3-205ENST00000470585 POTEAQ6S8J7 498 aa10.82□□□□□ -0.68
SF3A3-205ENST00000470585 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
SF3A3-205ENST00000470585 MSH6P52701 1360 aa10.81□□□□□ -0.68
SF3A3-205ENST00000470585 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
SF3A3-205ENST00000470585 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
SF3A3-205ENST00000470585 RPRD2Q5VT52 1461 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms