RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 HSPA1LP34931 641 aa14.88□□□□□ -0.03
CCDC171-204ENST00000470191 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
CCDC171-204ENST00000470191 PLEKHH2Q8IVE3 1493 aa14.87□□□□□ -0.03
CCDC171-204ENST00000470191 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
CCDC171-204ENST00000470191 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
CCDC171-204ENST00000470191 KIAA1107Q9UPP5 1409 aa14.84□□□□□ -0.03
CCDC171-204ENST00000470191 FBXO31Q5XUX0 539 aaPredicted RBP14.84□□□□□ -0.03
CCDC171-204ENST00000470191 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
CCDC171-204ENST00000470191 TIAM1Q13009 1591 aa14.83□□□□□ -0.04
CCDC171-204ENST00000470191 TOM1O60784 492 aa14.81□□□□□ -0.04
CCDC171-204ENST00000470191 TNRQ92752 1358 aa14.81□□□□□ -0.04
CCDC171-204ENST00000470191 SHANK2Q9UPX8 1470 aa14.81□□□□□ -0.04
CCDC171-204ENST00000470191 CPS1P31327 1500 aa14.81□□□□□ -0.04
CCDC171-204ENST00000470191 KIF3BO15066 747 aa14.8□□□□□ -0.04
CCDC171-204ENST00000470191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCDC171-204ENST00000470191 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
CCDC171-204ENST00000470191 DHX29Q7Z478 1369 aaKnown RBP14.77□□□□□ -0.04
CCDC171-204ENST00000470191 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.05
CCDC171-204ENST00000470191 MBD5Q9P267 1494 aa14.76□□□□□ -0.05
CCDC171-204ENST00000470191 STRCP1A6NGW2 1772 aa14.76□□□□□ -0.05
CCDC171-204ENST00000470191 ANKLE2Q86XL3 938 aa14.76□□□□□ -0.05
CCDC171-204ENST00000470191 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
CCDC171-204ENST00000470191 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
CCDC171-204ENST00000470191 PZPP20742 1482 aa14.76□□□□□ -0.05
CCDC171-204ENST00000470191 IQGAP1P46940 1657 aa14.75□□□□□ -0.05
CCDC171-204ENST00000470191 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
CCDC171-204ENST00000470191 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
CCDC171-204ENST00000470191 RTEL1-TNFRSF6BF6WH68 1400 aa14.74□□□□□ -0.05
CCDC171-204ENST00000470191 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
CCDC171-204ENST00000470191 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
CCDC171-204ENST00000470191 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
CCDC171-204ENST00000470191 CAMSAP2Q08AD1 1489 aa14.72□□□□□ -0.05
CCDC171-204ENST00000470191 DEPDC5O75140 1603 aa14.72□□□□□ -0.05
CCDC171-204ENST00000470191 FAM135AQ9P2D6 1515 aa14.71□□□□□ -0.05
CCDC171-204ENST00000470191 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.05
CCDC171-204ENST00000470191 MIA2Q96PC5 1412 aa14.71□□□□□ -0.05
CCDC171-204ENST00000470191 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
CCDC171-204ENST00000470191 CEP152O94986 1710 aa14.69□□□□□ -0.06
CCDC171-204ENST00000470191 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
CCDC171-204ENST00000470191 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
CCDC171-204ENST00000470191 MED14O60244 1454 aa14.68□□□□□ -0.06
CCDC171-204ENST00000470191 LRRC7Q96NW7 1537 aa14.67□□□□□ -0.06
CCDC171-204ENST00000470191 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
CCDC171-204ENST00000470191 SYNMO15061 1565 aa14.66□□□□□ -0.06
CCDC171-204ENST00000470191 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
CCDC171-204ENST00000470191 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
CCDC171-204ENST00000470191 UBR1Q8IWV7 1749 aa14.65□□□□□ -0.06
CCDC171-204ENST00000470191 XIRP1Q702N8 1843 aaKnown RBP14.64□□□□□ -0.07
CCDC171-204ENST00000470191 ARHGEF5Q12774 1597 aa14.64□□□□□ -0.07
CCDC171-204ENST00000470191 ABCC3O15438 1527 aa14.63□□□□□ -0.07
CCDC171-204ENST00000470191 TSPY4P0CV99 314 aa14.63□□□□□ -0.07
CCDC171-204ENST00000470191 TSPY10P0CW01 314 aa14.63□□□□□ -0.07
CCDC171-204ENST00000470191 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
CCDC171-204ENST00000470191 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
CCDC171-204ENST00000470191 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
CCDC171-204ENST00000470191 EIF2AK4Q9P2K8 1649 aaKnown RBP14.59□□□□□ -0.07
CCDC171-204ENST00000470191 RGS17Q9UGC6 210 aaPredicted RBP14.58□□□□□ -0.08
CCDC171-204ENST00000470191 SCAF11Q99590 1463 aaKnown RBP14.57□□□□□ -0.08
CCDC171-204ENST00000470191 MAST1Q9Y2H9 1570 aa14.56□□□□□ -0.08
CCDC171-204ENST00000470191 LTKP29376 864 aa14.56□□□□□ -0.08
CCDC171-204ENST00000470191 TXNDC2Q86VQ3 553 aa14.56□□□□□ -0.08
CCDC171-204ENST00000470191 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
CCDC171-204ENST00000470191 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
CCDC171-204ENST00000470191 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
CCDC171-204ENST00000470191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC171-204ENST00000470191 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.08
CCDC171-204ENST00000470191 EID1Q9Y6B2 187 aa14.52□□□□□ -0.09
CCDC171-204ENST00000470191 SLIT1O75093 1534 aa14.51□□□□□ -0.09
CCDC171-204ENST00000470191 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
CCDC171-204ENST00000470191 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
CCDC171-204ENST00000470191 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
CCDC171-204ENST00000470191 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
CCDC171-204ENST00000470191 ARHGAP23Q9P227 1491 aa14.5□□□□□ -0.09
CCDC171-204ENST00000470191 CROCC2H7BZ55 1655 aa14.49□□□□□ -0.09
CCDC171-204ENST00000470191 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
CCDC171-204ENST00000470191 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
CCDC171-204ENST00000470191 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
CCDC171-204ENST00000470191 PRDM15P57071 1507 aaPredicted RBP14.47□□□□□ -0.09
CCDC171-204ENST00000470191 PHLPP1O60346 1717 aa14.47□□□□□ -0.09
CCDC171-204ENST00000470191 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
CCDC171-204ENST00000470191 KANK4Q5T7N3 995 aaPredicted RBP14.46□□□□□ -0.09
CCDC171-204ENST00000470191 BCANQ96GW7 911 aa14.46□□□□□ -0.09
CCDC171-204ENST00000470191 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
CCDC171-204ENST00000470191 KIF15Q9NS87 1388 aa14.46□□□□□ -0.1
CCDC171-204ENST00000470191 MYOM3Q5VTT5 1437 aa14.45□□□□□ -0.1
CCDC171-204ENST00000470191 EFCAB6Q5THR3 1501 aa14.45□□□□□ -0.1
CCDC171-204ENST00000470191 TMEM2Q9UHN6 1383 aa14.45□□□□□ -0.1
CCDC171-204ENST00000470191 MAP3K1Q13233 1512 aa14.44□□□□□ -0.1
CCDC171-204ENST00000470191 MYO5BQ9ULV0 1848 aa14.43□□□□□ -0.1
CCDC171-204ENST00000470191 ARHGAP31Q2M1Z3 1444 aa14.43□□□□□ -0.1
CCDC171-204ENST00000470191 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
CCDC171-204ENST00000470191 KCNA6P17658 529 aa14.42□□□□□ -0.1
CCDC171-204ENST00000470191 KANK1Q14678 1352 aa14.42□□□□□ -0.1
CCDC171-204ENST00000470191 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
CCDC171-204ENST00000470191 PTPN23Q9H3S7 1636 aa14.41□□□□□ -0.1
CCDC171-204ENST00000470191 IDI1Q13907 227 aa14.41□□□□□ -0.1
CCDC171-204ENST00000470191 CHIC2Q9UKJ5 165 aa14.41□□□□□ -0.1
CCDC171-204ENST00000470191 ERBINQ96RT1 1412 aa14.41□□□□□ -0.1
CCDC171-204ENST00000470191 TET3O43151 1660 aa14.4□□□□□ -0.1
CCDC171-204ENST00000470191 ABCC5O15440 1437 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms