RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 HSPA2P54652 639 aa16.28■□□□□ 0.2
SSR3-205ENST00000467789 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
SSR3-205ENST00000467789 NPATQ14207 1427 aa16.28■□□□□ 0.2
SSR3-205ENST00000467789 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
SSR3-205ENST00000467789 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
SSR3-205ENST00000467789 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
SSR3-205ENST00000467789 KANK4Q5T7N3 995 aaPredicted RBP16.27■□□□□ 0.2
SSR3-205ENST00000467789 FAM135AQ9P2D6 1515 aa16.26■□□□□ 0.19
SSR3-205ENST00000467789 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
SSR3-205ENST00000467789 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
SSR3-205ENST00000467789 GGT6Q6P531 493 aa16.24■□□□□ 0.19
SSR3-205ENST00000467789 MAST1Q9Y2H9 1570 aa16.24■□□□□ 0.19
SSR3-205ENST00000467789 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
SSR3-205ENST00000467789 KIF3BO15066 747 aa16.19■□□□□ 0.18
SSR3-205ENST00000467789 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
SSR3-205ENST00000467789 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
SSR3-205ENST00000467789 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
SSR3-205ENST00000467789 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
SSR3-205ENST00000467789 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
SSR3-205ENST00000467789 ZNF142P52746 1687 aaPredicted RBP16.16■□□□□ 0.18
SSR3-205ENST00000467789 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SSR3-205ENST00000467789 FBXO41Q8TF61 875 aa16.15■□□□□ 0.18
SSR3-205ENST00000467789 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
SSR3-205ENST00000467789 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
SSR3-205ENST00000467789 PTPRTO14522 1441 aa16.14■□□□□ 0.17
SSR3-205ENST00000467789 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
SSR3-205ENST00000467789 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
SSR3-205ENST00000467789 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
SSR3-205ENST00000467789 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
SSR3-205ENST00000467789 DUOX2Q9NRD8 1548 aa16.13■□□□□ 0.17
SSR3-205ENST00000467789 NCOA1Q15788 1441 aa16.12■□□□□ 0.17
SSR3-205ENST00000467789 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
SSR3-205ENST00000467789 PZPP20742 1482 aa16.12■□□□□ 0.17
SSR3-205ENST00000467789 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
SSR3-205ENST00000467789 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
SSR3-205ENST00000467789 PLA2R1Q13018 1463 aa16.11■□□□□ 0.17
SSR3-205ENST00000467789 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
SSR3-205ENST00000467789 ZBTB22O15209 634 aa16.1■□□□□ 0.17
SSR3-205ENST00000467789 ABCC5O15440 1437 aa16.1■□□□□ 0.17
SSR3-205ENST00000467789 DAPK1P53355 1430 aa16.1■□□□□ 0.17
SSR3-205ENST00000467789 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
SSR3-205ENST00000467789 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
SSR3-205ENST00000467789 KIF15Q9NS87 1388 aa16.08■□□□□ 0.16
SSR3-205ENST00000467789 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
SSR3-205ENST00000467789 PKD2Q13563 968 aa16.07■□□□□ 0.16
SSR3-205ENST00000467789 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
SSR3-205ENST00000467789 TNRQ92752 1358 aa16.07■□□□□ 0.16
SSR3-205ENST00000467789 ABCC3O15438 1527 aa16.06■□□□□ 0.16
SSR3-205ENST00000467789 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
SSR3-205ENST00000467789 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
SSR3-205ENST00000467789 ANKRD30AQ9BXX3 1397 aa16.05■□□□□ 0.16
SSR3-205ENST00000467789 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
SSR3-205ENST00000467789 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
SSR3-205ENST00000467789 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
SSR3-205ENST00000467789 DEPDC5O75140 1603 aa16.02■□□□□ 0.16
SSR3-205ENST00000467789 RRP7BPQ9NSQ0 103 aa16.02■□□□□ 0.16
SSR3-205ENST00000467789 SPATA31D1Q6ZQQ2 1576 aa16.01■□□□□ 0.15
SSR3-205ENST00000467789 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
SSR3-205ENST00000467789 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
SSR3-205ENST00000467789 CEP152O94986 1710 aa16■□□□□ 0.15
SSR3-205ENST00000467789 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
SSR3-205ENST00000467789 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
SSR3-205ENST00000467789 KANK1Q14678 1352 aa16■□□□□ 0.15
SSR3-205ENST00000467789 NCKAP5LQ9HCH0 1330 aa15.99■□□□□ 0.15
SSR3-205ENST00000467789 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
SSR3-205ENST00000467789 UGGT1Q9NYU2 1555 aa15.99■□□□□ 0.15
SSR3-205ENST00000467789 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
SSR3-205ENST00000467789 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
SSR3-205ENST00000467789 LTBP4Q8N2S1 1624 aa15.97■□□□□ 0.15
SSR3-205ENST00000467789 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
SSR3-205ENST00000467789 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
SSR3-205ENST00000467789 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
SSR3-205ENST00000467789 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
SSR3-205ENST00000467789 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
SSR3-205ENST00000467789 VWDEQ8N2E2 1590 aa15.94■□□□□ 0.14
SSR3-205ENST00000467789 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
SSR3-205ENST00000467789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.92■□□□□ 0.14
SSR3-205ENST00000467789 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
SSR3-205ENST00000467789 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
SSR3-205ENST00000467789 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
SSR3-205ENST00000467789 MED14O60244 1454 aa15.91■□□□□ 0.14
SSR3-205ENST00000467789 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
SSR3-205ENST00000467789 UBR1Q8IWV7 1749 aa15.9■□□□□ 0.14
SSR3-205ENST00000467789 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
SSR3-205ENST00000467789 KDM5AP29375 1690 aaKnown RBP15.89■□□□□ 0.13
SSR3-205ENST00000467789 EFCAB6Q5THR3 1501 aa15.88■□□□□ 0.13
SSR3-205ENST00000467789 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
SSR3-205ENST00000467789 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
SSR3-205ENST00000467789 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
SSR3-205ENST00000467789 CPS1P31327 1500 aa15.86■□□□□ 0.13
SSR3-205ENST00000467789 SLIT1O75093 1534 aa15.85■□□□□ 0.13
SSR3-205ENST00000467789 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
SSR3-205ENST00000467789 UNC13BO14795 1591 aa15.84■□□□□ 0.13
SSR3-205ENST00000467789 TET3O43151 1660 aa15.84■□□□□ 0.13
SSR3-205ENST00000467789 NOS1P29475 1434 aa15.84■□□□□ 0.13
SSR3-205ENST00000467789 PIK3C2BO00750 1634 aa15.83■□□□□ 0.13
SSR3-205ENST00000467789 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.12
SSR3-205ENST00000467789 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.12
SSR3-205ENST00000467789 SLC52A1Q9NWF4 448 aa15.82■□□□□ 0.12
SSR3-205ENST00000467789 SYNMO15061 1565 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms