RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
CTPS1-203ENST00000463285 PLEKHH2Q8IVE3 1493 aa14.31□□□□□ -0.12
CTPS1-203ENST00000463285 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
CTPS1-203ENST00000463285 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
CTPS1-203ENST00000463285 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
CTPS1-203ENST00000463285 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
CTPS1-203ENST00000463285 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
CTPS1-203ENST00000463285 ADGBQ8N7X0 1667 aa14.25□□□□□ -0.13
CTPS1-203ENST00000463285 A2ML1A8K2U0 1454 aa14.25□□□□□ -0.13
CTPS1-203ENST00000463285 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
CTPS1-203ENST00000463285 ZNF644Q9H582 1327 aaPredicted RBP14.23□□□□□ -0.13
CTPS1-203ENST00000463285 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
CTPS1-203ENST00000463285 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
CTPS1-203ENST00000463285 HSPA1LP34931 641 aa14.21□□□□□ -0.13
CTPS1-203ENST00000463285 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
CTPS1-203ENST00000463285 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
CTPS1-203ENST00000463285 TNRQ92752 1358 aa14.2□□□□□ -0.14
CTPS1-203ENST00000463285 MBD5Q9P267 1494 aa14.19□□□□□ -0.14
CTPS1-203ENST00000463285 POLR1AO95602 1720 aaPredicted RBP14.19□□□□□ -0.14
CTPS1-203ENST00000463285 DHX29Q7Z478 1369 aaKnown RBP14.19□□□□□ -0.14
CTPS1-203ENST00000463285 KIF3BO15066 747 aa14.18□□□□□ -0.14
CTPS1-203ENST00000463285 TOM1O60784 492 aa14.18□□□□□ -0.14
CTPS1-203ENST00000463285 CPS1P31327 1500 aa14.18□□□□□ -0.14
CTPS1-203ENST00000463285 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
CTPS1-203ENST00000463285 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-203ENST00000463285 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
CTPS1-203ENST00000463285 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
CTPS1-203ENST00000463285 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
CTPS1-203ENST00000463285 PZPP20742 1482 aa14.16□□□□□ -0.14
CTPS1-203ENST00000463285 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
CTPS1-203ENST00000463285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTPS1-203ENST00000463285 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
CTPS1-203ENST00000463285 WASHC2CQ9Y4E1 1318 aa14.15□□□□□ -0.15
CTPS1-203ENST00000463285 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
CTPS1-203ENST00000463285 KCNA4P22459 653 aa14.13□□□□□ -0.15
CTPS1-203ENST00000463285 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
CTPS1-203ENST00000463285 FAM135AQ9P2D6 1515 aa14.12□□□□□ -0.15
CTPS1-203ENST00000463285 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
CTPS1-203ENST00000463285 VWDEQ8N2E2 1590 aa14.12□□□□□ -0.15
CTPS1-203ENST00000463285 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
CTPS1-203ENST00000463285 NPHP4O75161 1426 aaPredicted RBP14.11□□□□□ -0.15
CTPS1-203ENST00000463285 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
CTPS1-203ENST00000463285 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
CTPS1-203ENST00000463285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.156e-6■□□□□ 11
CTPS1-203ENST00000463285 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
CTPS1-203ENST00000463285 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
CTPS1-203ENST00000463285 RSPH4AQ5TD94 716 aa14.08□□□□□ -0.16
CTPS1-203ENST00000463285 MED14O60244 1454 aa14.07□□□□□ -0.16
CTPS1-203ENST00000463285 DEPDC5O75140 1603 aa14.07□□□□□ -0.16
CTPS1-203ENST00000463285 ALKQ9UM73 1620 aa14.07□□□□□ -0.16
CTPS1-203ENST00000463285 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
CTPS1-203ENST00000463285 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
CTPS1-203ENST00000463285 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
CTPS1-203ENST00000463285 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
CTPS1-203ENST00000463285 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
CTPS1-203ENST00000463285 ABCC3O15438 1527 aa14.03□□□□□ -0.16
CTPS1-203ENST00000463285 STRCP1A6NGW2 1772 aa14.03□□□□□ -0.16
CTPS1-203ENST00000463285 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
CTPS1-203ENST00000463285 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
CTPS1-203ENST00000463285 SYNMO15061 1565 aa14.01□□□□□ -0.17
CTPS1-203ENST00000463285 ERVK-7P63135 1459 aa14.01□□□□□ -0.17
CTPS1-203ENST00000463285 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
CTPS1-203ENST00000463285 CEP152O94986 1710 aa13.98□□□□□ -0.17
CTPS1-203ENST00000463285 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
CTPS1-203ENST00000463285 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
CTPS1-203ENST00000463285 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
CTPS1-203ENST00000463285 TXNDC2Q86VQ3 553 aa13.96□□□□□ -0.17
CTPS1-203ENST00000463285 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.17
CTPS1-203ENST00000463285 CFAP65Q6ZU64 1925 aaKnown RBP13.96□□□□□ -0.18
CTPS1-203ENST00000463285 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
CTPS1-203ENST00000463285 LTKP29376 864 aa13.94□□□□□ -0.18
CTPS1-203ENST00000463285 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
CTPS1-203ENST00000463285 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
CTPS1-203ENST00000463285 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
CTPS1-203ENST00000463285 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
CTPS1-203ENST00000463285 SLIT1O75093 1534 aa13.91□□□□□ -0.18
CTPS1-203ENST00000463285 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
CTPS1-203ENST00000463285 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
CTPS1-203ENST00000463285 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.19
CTPS1-203ENST00000463285 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
CTPS1-203ENST00000463285 PIK3C2BO00750 1634 aa13.89□□□□□ -0.19
CTPS1-203ENST00000463285 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
CTPS1-203ENST00000463285 KIF15Q9NS87 1388 aa13.88□□□□□ -0.19
CTPS1-203ENST00000463285 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
CTPS1-203ENST00000463285 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
CTPS1-203ENST00000463285 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
CTPS1-203ENST00000463285 TMEM94Q12767 1356 aa13.87□□□□□ -0.19
CTPS1-203ENST00000463285 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
CTPS1-203ENST00000463285 RRP7BPQ9NSQ0 103 aa13.87□□□□□ -0.19
CTPS1-203ENST00000463285 FAM135BQ49AJ0 1406 aa13.87□□□□□ -0.19
CTPS1-203ENST00000463285 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
CTPS1-203ENST00000463285 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
CTPS1-203ENST00000463285 RBM33Q96EV2 1170 aaKnown RBP13.85□□□□□ -0.19
CTPS1-203ENST00000463285 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
CTPS1-203ENST00000463285 KANK1Q14678 1352 aa13.84□□□□□ -0.19
CTPS1-203ENST00000463285 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
CTPS1-203ENST00000463285 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
CTPS1-203ENST00000463285 ABCC5O15440 1437 aa13.83□□□□□ -0.2
CTPS1-203ENST00000463285 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
CTPS1-203ENST00000463285 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms