RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
PCCB-203ENST00000462542 SHANK2Q9UPX8 1470 aa18.9■□□□□ 0.62
PCCB-203ENST00000462542 TNRQ92752 1358 aa18.89■□□□□ 0.61
PCCB-203ENST00000462542 FBXO31Q5XUX0 539 aaPredicted RBP18.88■□□□□ 0.61
PCCB-203ENST00000462542 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
PCCB-203ENST00000462542 KIF3BO15066 747 aa18.87■□□□□ 0.61
PCCB-203ENST00000462542 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
PCCB-203ENST00000462542 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
PCCB-203ENST00000462542 WASHC2CQ9Y4E1 1318 aa18.86■□□□□ 0.61
PCCB-203ENST00000462542 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
PCCB-203ENST00000462542 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
PCCB-203ENST00000462542 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.6
PCCB-203ENST00000462542 PZPP20742 1482 aa18.83■□□□□ 0.6
PCCB-203ENST00000462542 MIA2Q96PC5 1412 aa18.82■□□□□ 0.6
PCCB-203ENST00000462542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
PCCB-203ENST00000462542 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
PCCB-203ENST00000462542 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
PCCB-203ENST00000462542 MED14O60244 1454 aa18.79■□□□□ 0.6
PCCB-203ENST00000462542 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
PCCB-203ENST00000462542 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
PCCB-203ENST00000462542 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
PCCB-203ENST00000462542 TIAM1Q13009 1591 aa18.77■□□□□ 0.6
PCCB-203ENST00000462542 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
PCCB-203ENST00000462542 VWDEQ8N2E2 1590 aa18.76■□□□□ 0.59
PCCB-203ENST00000462542 DEPDC5O75140 1603 aa18.76■□□□□ 0.59
PCCB-203ENST00000462542 TSPY4P0CV99 314 aa18.76■□□□□ 0.59
PCCB-203ENST00000462542 TSPY10P0CW01 314 aa18.76■□□□□ 0.59
PCCB-203ENST00000462542 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
PCCB-203ENST00000462542 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
PCCB-203ENST00000462542 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
PCCB-203ENST00000462542 ALKQ9UM73 1620 aa18.69■□□□□ 0.58
PCCB-203ENST00000462542 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
PCCB-203ENST00000462542 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
PCCB-203ENST00000462542 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
PCCB-203ENST00000462542 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
PCCB-203ENST00000462542 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
PCCB-203ENST00000462542 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
PCCB-203ENST00000462542 SYNMO15061 1565 aa18.62■□□□□ 0.57
PCCB-203ENST00000462542 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
PCCB-203ENST00000462542 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
PCCB-203ENST00000462542 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
PCCB-203ENST00000462542 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
PCCB-203ENST00000462542 ABCC3O15438 1527 aa18.6■□□□□ 0.57
PCCB-203ENST00000462542 ERVK-7P63135 1459 aa18.59■□□□□ 0.57
PCCB-203ENST00000462542 RGS17Q9UGC6 210 aaPredicted RBP18.59■□□□□ 0.57
PCCB-203ENST00000462542 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
PCCB-203ENST00000462542 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.56
PCCB-203ENST00000462542 LTKP29376 864 aa18.57■□□□□ 0.56
PCCB-203ENST00000462542 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
PCCB-203ENST00000462542 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
PCCB-203ENST00000462542 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
PCCB-203ENST00000462542 UBR1Q8IWV7 1749 aa18.54■□□□□ 0.56
PCCB-203ENST00000462542 SLIT1O75093 1534 aa18.54■□□□□ 0.56
PCCB-203ENST00000462542 ARHGAP23Q9P227 1491 aa18.53■□□□□ 0.56
PCCB-203ENST00000462542 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
PCCB-203ENST00000462542 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
PCCB-203ENST00000462542 KCNA6P17658 529 aa18.49■□□□□ 0.55
PCCB-203ENST00000462542 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
PCCB-203ENST00000462542 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
PCCB-203ENST00000462542 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
PCCB-203ENST00000462542 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
PCCB-203ENST00000462542 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
PCCB-203ENST00000462542 MYOM3Q5VTT5 1437 aa18.48■□□□□ 0.55
PCCB-203ENST00000462542 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
PCCB-203ENST00000462542 TMEM2Q9UHN6 1383 aa18.47■□□□□ 0.55
PCCB-203ENST00000462542 CEP152O94986 1710 aa18.46■□□□□ 0.55
PCCB-203ENST00000462542 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
PCCB-203ENST00000462542 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
PCCB-203ENST00000462542 KANK1Q14678 1352 aa18.43■□□□□ 0.54
PCCB-203ENST00000462542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
PCCB-203ENST00000462542 IDI1Q13907 227 aa18.42■□□□□ 0.54
PCCB-203ENST00000462542 RRP7BPQ9NSQ0 103 aa18.42■□□□□ 0.54
PCCB-203ENST00000462542 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
PCCB-203ENST00000462542 ERBINQ96RT1 1412 aa18.41■□□□□ 0.54
PCCB-203ENST00000462542 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
PCCB-203ENST00000462542 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
PCCB-203ENST00000462542 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
PCCB-203ENST00000462542 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
PCCB-203ENST00000462542 MAP3K1Q13233 1512 aa18.39■□□□□ 0.54
PCCB-203ENST00000462542 PIK3C2BO00750 1634 aa18.39■□□□□ 0.53
PCCB-203ENST00000462542 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
PCCB-203ENST00000462542 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
PCCB-203ENST00000462542 EFCAB6Q5THR3 1501 aa18.38■□□□□ 0.53
PCCB-203ENST00000462542 TET3O43151 1660 aa18.38■□□□□ 0.53
PCCB-203ENST00000462542 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
PCCB-203ENST00000462542 SLC52A1Q9NWF4 448 aa18.37■□□□□ 0.53
PCCB-203ENST00000462542 MSH6P52701 1360 aa18.36■□□□□ 0.53
PCCB-203ENST00000462542 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
PCCB-203ENST00000462542 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
PCCB-203ENST00000462542 BCANQ96GW7 911 aa18.35■□□□□ 0.53
PCCB-203ENST00000462542 ABCC5O15440 1437 aa18.34■□□□□ 0.53
PCCB-203ENST00000462542 JCADQ9P266 1359 aa18.34■□□□□ 0.53
PCCB-203ENST00000462542 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.53
PCCB-203ENST00000462542 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
PCCB-203ENST00000462542 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
PCCB-203ENST00000462542 NOS1P29475 1434 aa18.3■□□□□ 0.52
PCCB-203ENST00000462542 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
PCCB-203ENST00000462542 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
PCCB-203ENST00000462542 DAPK1P53355 1430 aa18.28■□□□□ 0.52
PCCB-203ENST00000462542 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms