RNA–Protein interactions for RNA: ENST00000462224.5

PCP4-202, Transcript of Purkinje cell protein 4, humanhuman

TSL 2

Gene PCP4, Length 683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-202ENST00000462224 DNMT1P26358 1616 aaKnown RBP12.18□□□□□ -0.46
PCP4-202ENST00000462224 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
PCP4-202ENST00000462224 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
PCP4-202ENST00000462224 FYCO1Q9BQS8 1478 aa12.17□□□□□ -0.46
PCP4-202ENST00000462224 RTEL1-TNFRSF6BF6WH68 1400 aa12.17□□□□□ -0.46
PCP4-202ENST00000462224 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
PCP4-202ENST00000462224 ADRA2BP18089 450 aa12.16□□□□□ -0.46
PCP4-202ENST00000462224 INO80Q9ULG1 1556 aaPredicted RBP12.16□□□□□ -0.46
PCP4-202ENST00000462224 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
PCP4-202ENST00000462224 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.46
PCP4-202ENST00000462224 TNRQ92752 1358 aa12.15□□□□□ -0.46
PCP4-202ENST00000462224 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
PCP4-202ENST00000462224 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
PCP4-202ENST00000462224 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
PCP4-202ENST00000462224 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
PCP4-202ENST00000462224 KIF3BO15066 747 aa12.12□□□□□ -0.47
PCP4-202ENST00000462224 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
PCP4-202ENST00000462224 MED14O60244 1454 aa12.12□□□□□ -0.47
PCP4-202ENST00000462224 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
PCP4-202ENST00000462224 PZPP20742 1482 aa12.11□□□□□ -0.47
PCP4-202ENST00000462224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
PCP4-202ENST00000462224 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
PCP4-202ENST00000462224 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
PCP4-202ENST00000462224 MBD5Q9P267 1494 aa12.1□□□□□ -0.47
PCP4-202ENST00000462224 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
PCP4-202ENST00000462224 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
PCP4-202ENST00000462224 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
PCP4-202ENST00000462224 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
PCP4-202ENST00000462224 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
PCP4-202ENST00000462224 KDM5DQ9BY66 1539 aa12.07□□□□□ -0.48
PCP4-202ENST00000462224 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
PCP4-202ENST00000462224 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
PCP4-202ENST00000462224 LRRC7Q96NW7 1537 aa12.04□□□□□ -0.48
PCP4-202ENST00000462224 ALKQ9UM73 1620 aa12.04□□□□□ -0.48
PCP4-202ENST00000462224 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
PCP4-202ENST00000462224 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.48
PCP4-202ENST00000462224 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
PCP4-202ENST00000462224 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
PCP4-202ENST00000462224 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
PCP4-202ENST00000462224 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
PCP4-202ENST00000462224 SYNMO15061 1565 aa12.01□□□□□ -0.49
PCP4-202ENST00000462224 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
PCP4-202ENST00000462224 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
PCP4-202ENST00000462224 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
PCP4-202ENST00000462224 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
PCP4-202ENST00000462224 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
PCP4-202ENST00000462224 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
PCP4-202ENST00000462224 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
PCP4-202ENST00000462224 LTKP29376 864 aa11.95□□□□□ -0.5
PCP4-202ENST00000462224 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
PCP4-202ENST00000462224 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
PCP4-202ENST00000462224 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
PCP4-202ENST00000462224 ABCC3O15438 1527 aa11.93□□□□□ -0.5
PCP4-202ENST00000462224 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
PCP4-202ENST00000462224 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
PCP4-202ENST00000462224 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
PCP4-202ENST00000462224 SLIT1O75093 1534 aa11.92□□□□□ -0.5
PCP4-202ENST00000462224 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
PCP4-202ENST00000462224 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
PCP4-202ENST00000462224 KCNA6P17658 529 aa11.91□□□□□ -0.5
PCP4-202ENST00000462224 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
PCP4-202ENST00000462224 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
PCP4-202ENST00000462224 MAST1Q9Y2H9 1570 aa11.9□□□□□ -0.5
PCP4-202ENST00000462224 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.51
PCP4-202ENST00000462224 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
PCP4-202ENST00000462224 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
PCP4-202ENST00000462224 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
PCP4-202ENST00000462224 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
PCP4-202ENST00000462224 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
PCP4-202ENST00000462224 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
PCP4-202ENST00000462224 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
PCP4-202ENST00000462224 SLAIN2Q9P270 581 aa11.85□□□□□ -0.51
PCP4-202ENST00000462224 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
PCP4-202ENST00000462224 MSH6P52701 1360 aa11.84□□□□□ -0.51
PCP4-202ENST00000462224 KANK1Q14678 1352 aa11.84□□□□□ -0.51
PCP4-202ENST00000462224 JCADQ9P266 1359 aa11.84□□□□□ -0.51
PCP4-202ENST00000462224 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
PCP4-202ENST00000462224 IDI1Q13907 227 aa11.84□□□□□ -0.51
PCP4-202ENST00000462224 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
PCP4-202ENST00000462224 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
PCP4-202ENST00000462224 CEP152O94986 1710 aa11.83□□□□□ -0.52
PCP4-202ENST00000462224 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
PCP4-202ENST00000462224 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
PCP4-202ENST00000462224 ROBO1Q9Y6N7 1651 aa11.83□□□□□ -0.52
PCP4-202ENST00000462224 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
PCP4-202ENST00000462224 SLC52A1Q9NWF4 448 aa11.82□□□□□ -0.52
PCP4-202ENST00000462224 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
PCP4-202ENST00000462224 SPATA31A6Q5VVP1 1343 aa11.82□□□□□ -0.52
PCP4-202ENST00000462224 TET3O43151 1660 aa11.81□□□□□ -0.52
PCP4-202ENST00000462224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCP4-202ENST00000462224 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
PCP4-202ENST00000462224 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
PCP4-202ENST00000462224 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCP4-202ENST00000462224 BCANQ96GW7 911 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
PCP4-202ENST00000462224 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms