RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 TNRQ92752 1358 aa27.42■■□□□ 1.98
PCMT1-204ENST00000460828 TIAM1Q13009 1591 aa27.41■■□□□ 1.98
PCMT1-204ENST00000460828 SHANK2Q9UPX8 1470 aa27.41■■□□□ 1.98
PCMT1-204ENST00000460828 KDM5DQ9BY66 1539 aa27.39■■□□□ 1.98
PCMT1-204ENST00000460828 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
PCMT1-204ENST00000460828 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
PCMT1-204ENST00000460828 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
PCMT1-204ENST00000460828 RTEL1-TNFRSF6BF6WH68 1400 aa27.36■■□□□ 1.97
PCMT1-204ENST00000460828 PZPP20742 1482 aa27.36■■□□□ 1.97
PCMT1-204ENST00000460828 DHX29Q7Z478 1369 aaKnown RBP27.35■■□□□ 1.97
PCMT1-204ENST00000460828 FAM135AQ9P2D6 1515 aa27.34■■□□□ 1.97
PCMT1-204ENST00000460828 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
PCMT1-204ENST00000460828 KIF3BO15066 747 aa27.33■■□□□ 1.97
PCMT1-204ENST00000460828 FBXO31Q5XUX0 539 aaPredicted RBP27.33■■□□□ 1.97
PCMT1-204ENST00000460828 ANKLE2Q86XL3 938 aa27.32■■□□□ 1.96
PCMT1-204ENST00000460828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.96
PCMT1-204ENST00000460828 VWDEQ8N2E2 1590 aa27.31■■□□□ 1.96
PCMT1-204ENST00000460828 UGGT1Q9NYU2 1555 aa27.3■■□□□ 1.96
PCMT1-204ENST00000460828 WASHC2CQ9Y4E1 1318 aa27.29■■□□□ 1.96
PCMT1-204ENST00000460828 CCDC141Q6ZP82 1450 aa27.29■■□□□ 1.96
PCMT1-204ENST00000460828 IQGAP1P46940 1657 aa27.27■■□□□ 1.96
PCMT1-204ENST00000460828 NLRP1Q9C000 1473 aa27.27■■□□□ 1.96
PCMT1-204ENST00000460828 NPHP4O75161 1426 aaPredicted RBP27.27■■□□□ 1.96
PCMT1-204ENST00000460828 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
PCMT1-204ENST00000460828 DEPDC5O75140 1603 aa27.27■■□□□ 1.96
PCMT1-204ENST00000460828 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
PCMT1-204ENST00000460828 CAMSAP2Q08AD1 1489 aa27.24■■□□□ 1.95
PCMT1-204ENST00000460828 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
PCMT1-204ENST00000460828 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
PCMT1-204ENST00000460828 MED14O60244 1454 aa27.21■■□□□ 1.95
PCMT1-204ENST00000460828 RNF17Q9BXT8 1623 aaKnown RBP27.21■■□□□ 1.95
PCMT1-204ENST00000460828 SYNMO15061 1565 aa27.2■■□□□ 1.94
PCMT1-204ENST00000460828 ALKQ9UM73 1620 aa27.19■■□□□ 1.94
PCMT1-204ENST00000460828 STRCP1A6NGW2 1772 aa27.15■■□□□ 1.94
PCMT1-204ENST00000460828 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
PCMT1-204ENST00000460828 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
PCMT1-204ENST00000460828 LRRC7Q96NW7 1537 aa27.13■■□□□ 1.93
PCMT1-204ENST00000460828 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
PCMT1-204ENST00000460828 ARHGEF5Q12774 1597 aa27.11■■□□□ 1.93
PCMT1-204ENST00000460828 TSPY4P0CV99 314 aa27.1■■□□□ 1.93
PCMT1-204ENST00000460828 TSPY10P0CW01 314 aa27.1■■□□□ 1.93
PCMT1-204ENST00000460828 ABCC3O15438 1527 aa27.1■■□□□ 1.93
PCMT1-204ENST00000460828 ERVK-7P63135 1459 aa27.06■■□□□ 1.92
PCMT1-204ENST00000460828 CEP152O94986 1710 aa27.04■■□□□ 1.92
PCMT1-204ENST00000460828 UBR1Q8IWV7 1749 aa27.04■■□□□ 1.92
PCMT1-204ENST00000460828 EIF2AK4Q9P2K8 1649 aaKnown RBP27.04■■□□□ 1.92
PCMT1-204ENST00000460828 SCAF11Q99590 1463 aaKnown RBP27.01■■□□□ 1.91
PCMT1-204ENST00000460828 CFAP65Q6ZU64 1925 aaKnown RBP27■■□□□ 1.91
PCMT1-204ENST00000460828 MAST1Q9Y2H9 1570 aa27■■□□□ 1.91
PCMT1-204ENST00000460828 MROH1Q8NDA8 1641 aa26.95■■□□□ 1.91
PCMT1-204ENST00000460828 XIRP1Q702N8 1843 aaKnown RBP26.94■■□□□ 1.9
PCMT1-204ENST00000460828 TXNDC2Q86VQ3 553 aa26.91■■□□□ 1.9
PCMT1-204ENST00000460828 SLIT1O75093 1534 aa26.9■■□□□ 1.9
PCMT1-204ENST00000460828 RGS17Q9UGC6 210 aaPredicted RBP26.89■■□□□ 1.9
PCMT1-204ENST00000460828 EID1Q9Y6B2 187 aa26.89■■□□□ 1.9
PCMT1-204ENST00000460828 ARHGAP23Q9P227 1491 aa26.88■■□□□ 1.89
PCMT1-204ENST00000460828 DUOX2Q9NRD8 1548 aa26.87■■□□□ 1.89
PCMT1-204ENST00000460828 LTKP29376 864 aa26.87■■□□□ 1.89
PCMT1-204ENST00000460828 PIK3C2BO00750 1634 aa26.85■■□□□ 1.89
PCMT1-204ENST00000460828 LRRC9Q6ZRR7 1453 aa26.85■■□□□ 1.89
PCMT1-204ENST00000460828 STAG3Q9UJ98 1225 aa26.84■■□□□ 1.89
PCMT1-204ENST00000460828 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
PCMT1-204ENST00000460828 ROBO1Q9Y6N7 1651 aa26.81■■□□□ 1.88
PCMT1-204ENST00000460828 FAM135BQ49AJ0 1406 aa26.81■■□□□ 1.88
PCMT1-204ENST00000460828 ARHGAP31Q2M1Z3 1444 aa26.79■■□□□ 1.88
PCMT1-204ENST00000460828 MYOM3Q5VTT5 1437 aa26.79■■□□□ 1.88
PCMT1-204ENST00000460828 TMEM94Q12767 1356 aa26.78■■□□□ 1.88
PCMT1-204ENST00000460828 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
PCMT1-204ENST00000460828 CROCC2H7BZ55 1655 aa26.76■■□□□ 1.87
PCMT1-204ENST00000460828 ERBINQ96RT1 1412 aa26.76■■□□□ 1.87
PCMT1-204ENST00000460828 TMEM2Q9UHN6 1383 aa26.76■■□□□ 1.87
PCMT1-204ENST00000460828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.76■■□□□ 1.87
PCMT1-204ENST00000460828 EFCAB6Q5THR3 1501 aa26.75■■□□□ 1.87
PCMT1-204ENST00000460828 POTEAQ6S8J7 498 aa26.75■■□□□ 1.87
PCMT1-204ENST00000460828 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
PCMT1-204ENST00000460828 SETD1AO15047 1707 aaKnown RBP26.73■■□□□ 1.87
PCMT1-204ENST00000460828 KANK1Q14678 1352 aa26.73■■□□□ 1.87
PCMT1-204ENST00000460828 KDM5AP29375 1690 aaKnown RBP26.73■■□□□ 1.87
PCMT1-204ENST00000460828 MAP3K1Q13233 1512 aa26.72■■□□□ 1.87
PCMT1-204ENST00000460828 PROSER2Q86WR7 435 aaPredicted RBP26.7■■□□□ 1.86
PCMT1-204ENST00000460828 RRP7BPQ9NSQ0 103 aa26.7■■□□□ 1.86
PCMT1-204ENST00000460828 PHLPP1O60346 1717 aa26.69■■□□□ 1.86
PCMT1-204ENST00000460828 KCNA6P17658 529 aa26.69■■□□□ 1.86
PCMT1-204ENST00000460828 RBM33Q96EV2 1170 aaKnown RBP26.68■■□□□ 1.86
PCMT1-204ENST00000460828 SLC26A8Q96RN1 970 aa26.68■■□□□ 1.86
PCMT1-204ENST00000460828 BCANQ96GW7 911 aa26.67■■□□□ 1.86
PCMT1-204ENST00000460828 NKTRP30414 1462 aaKnown RBP26.67■■□□□ 1.86
PCMT1-204ENST00000460828 MSH6P52701 1360 aa26.66■■□□□ 1.86
PCMT1-204ENST00000460828 NWD1Q149M9 1564 aa26.66■■□□□ 1.86
PCMT1-204ENST00000460828 KANK4Q5T7N3 995 aaPredicted RBP26.65■■□□□ 1.86
PCMT1-204ENST00000460828 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
PCMT1-204ENST00000460828 PTPN23Q9H3S7 1636 aa26.64■■□□□ 1.85
PCMT1-204ENST00000460828 TET3O43151 1660 aa26.63■■□□□ 1.85
PCMT1-204ENST00000460828 ABCC5O15440 1437 aa26.62■■□□□ 1.85
PCMT1-204ENST00000460828 IDI1Q13907 227 aa26.61■■□□□ 1.85
PCMT1-204ENST00000460828 LMTK2Q8IWU2 1503 aa26.6■■□□□ 1.85
PCMT1-204ENST00000460828 JCADQ9P266 1359 aa26.59■■□□□ 1.85
PCMT1-204ENST00000460828 DAPK1P53355 1430 aa26.58■■□□□ 1.85
PCMT1-204ENST00000460828 SLAIN2Q9P270 581 aa26.54■■□□□ 1.84
PCMT1-204ENST00000460828 MEX3CQ5U5Q3 659 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms