RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 FBXO31Q5XUX0 539 aaPredicted RBP16.96■□□□□ 0.31
COMMD6-206ENST00000460675 TOM1O60784 492 aa16.95■□□□□ 0.3
COMMD6-206ENST00000460675 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
COMMD6-206ENST00000460675 KIF3BO15066 747 aa16.94■□□□□ 0.3
COMMD6-206ENST00000460675 DHX29Q7Z478 1369 aaKnown RBP16.93■□□□□ 0.3
COMMD6-206ENST00000460675 TNRQ92752 1358 aa16.92■□□□□ 0.3
COMMD6-206ENST00000460675 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
COMMD6-206ENST00000460675 MBD5Q9P267 1494 aa16.92■□□□□ 0.3
COMMD6-206ENST00000460675 ANKLE2Q86XL3 938 aa16.91■□□□□ 0.3
COMMD6-206ENST00000460675 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
COMMD6-206ENST00000460675 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
COMMD6-206ENST00000460675 CPS1P31327 1500 aa16.9■□□□□ 0.3
COMMD6-206ENST00000460675 TIAM1Q13009 1591 aa16.89■□□□□ 0.3
COMMD6-206ENST00000460675 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
COMMD6-206ENST00000460675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
COMMD6-206ENST00000460675 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
COMMD6-206ENST00000460675 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
COMMD6-206ENST00000460675 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
COMMD6-206ENST00000460675 PZPP20742 1482 aa16.86■□□□□ 0.29
COMMD6-206ENST00000460675 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
COMMD6-206ENST00000460675 KDM5DQ9BY66 1539 aa16.85■□□□□ 0.29
COMMD6-206ENST00000460675 RSPH4AQ5TD94 716 aa16.84■□□□□ 0.29
COMMD6-206ENST00000460675 CEP162Q5TB80 1403 aa16.84■□□□□ 0.29
COMMD6-206ENST00000460675 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
COMMD6-206ENST00000460675 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
COMMD6-206ENST00000460675 UGGT1Q9NYU2 1555 aa16.82■□□□□ 0.28
COMMD6-206ENST00000460675 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
COMMD6-206ENST00000460675 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
COMMD6-206ENST00000460675 NLRP1Q9C000 1473 aa16.81■□□□□ 0.28
COMMD6-206ENST00000460675 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
COMMD6-206ENST00000460675 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
COMMD6-206ENST00000460675 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
COMMD6-206ENST00000460675 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
COMMD6-206ENST00000460675 MED14O60244 1454 aa16.79■□□□□ 0.28
COMMD6-206ENST00000460675 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
COMMD6-206ENST00000460675 DEPDC5O75140 1603 aa16.77■□□□□ 0.27
COMMD6-206ENST00000460675 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
COMMD6-206ENST00000460675 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
COMMD6-206ENST00000460675 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
COMMD6-206ENST00000460675 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
COMMD6-206ENST00000460675 STRCP1A6NGW2 1772 aa16.71■□□□□ 0.27
COMMD6-206ENST00000460675 ABCC3O15438 1527 aa16.7■□□□□ 0.26
COMMD6-206ENST00000460675 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
COMMD6-206ENST00000460675 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
COMMD6-206ENST00000460675 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
COMMD6-206ENST00000460675 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
COMMD6-206ENST00000460675 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
COMMD6-206ENST00000460675 SYNMO15061 1565 aa16.66■□□□□ 0.26
COMMD6-206ENST00000460675 LTKP29376 864 aa16.65■□□□□ 0.26
COMMD6-206ENST00000460675 SCAF11Q99590 1463 aaKnown RBP16.65■□□□□ 0.26
COMMD6-206ENST00000460675 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
COMMD6-206ENST00000460675 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
COMMD6-206ENST00000460675 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
COMMD6-206ENST00000460675 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
COMMD6-206ENST00000460675 CEP152O94986 1710 aa16.63■□□□□ 0.25
COMMD6-206ENST00000460675 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
COMMD6-206ENST00000460675 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
COMMD6-206ENST00000460675 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
COMMD6-206ENST00000460675 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
COMMD6-206ENST00000460675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
COMMD6-206ENST00000460675 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
COMMD6-206ENST00000460675 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
COMMD6-206ENST00000460675 DUOX2Q9NRD8 1548 aa16.59■□□□□ 0.25
COMMD6-206ENST00000460675 RRP7BPQ9NSQ0 103 aa16.58■□□□□ 0.24
COMMD6-206ENST00000460675 SLIT1O75093 1534 aa16.58■□□□□ 0.24
COMMD6-206ENST00000460675 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
COMMD6-206ENST00000460675 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
COMMD6-206ENST00000460675 ARHGAP31Q2M1Z3 1444 aa16.55■□□□□ 0.24
COMMD6-206ENST00000460675 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
COMMD6-206ENST00000460675 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
COMMD6-206ENST00000460675 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
COMMD6-206ENST00000460675 TMEM94Q12767 1356 aa16.54■□□□□ 0.24
COMMD6-206ENST00000460675 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
COMMD6-206ENST00000460675 POTEAQ6S8J7 498 aa16.54■□□□□ 0.24
COMMD6-206ENST00000460675 PROSER2Q86WR7 435 aaPredicted RBP16.54■□□□□ 0.24
COMMD6-206ENST00000460675 KANK1Q14678 1352 aa16.53■□□□□ 0.24
COMMD6-206ENST00000460675 PIK3C2BO00750 1634 aa16.53■□□□□ 0.24
COMMD6-206ENST00000460675 KCNA6P17658 529 aa16.53■□□□□ 0.24
COMMD6-206ENST00000460675 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
COMMD6-206ENST00000460675 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
COMMD6-206ENST00000460675 IDI1Q13907 227 aa16.52■□□□□ 0.24
COMMD6-206ENST00000460675 ERBINQ96RT1 1412 aa16.52■□□□□ 0.23
COMMD6-206ENST00000460675 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
COMMD6-206ENST00000460675 BCANQ96GW7 911 aa16.51■□□□□ 0.23
COMMD6-206ENST00000460675 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
COMMD6-206ENST00000460675 ABCC5O15440 1437 aa16.49■□□□□ 0.23
COMMD6-206ENST00000460675 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
COMMD6-206ENST00000460675 CHIC2Q9UKJ5 165 aa16.48■□□□□ 0.23
COMMD6-206ENST00000460675 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
COMMD6-206ENST00000460675 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
COMMD6-206ENST00000460675 APLP2Q06481 763 aa16.45■□□□□ 0.22
COMMD6-206ENST00000460675 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
COMMD6-206ENST00000460675 DAPK1P53355 1430 aa16.45■□□□□ 0.22
COMMD6-206ENST00000460675 TET3O43151 1660 aa16.44■□□□□ 0.22
COMMD6-206ENST00000460675 MSH6P52701 1360 aa16.44■□□□□ 0.22
COMMD6-206ENST00000460675 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
COMMD6-206ENST00000460675 PTPN23Q9H3S7 1636 aa16.44■□□□□ 0.22
COMMD6-206ENST00000460675 KDM5AP29375 1690 aaKnown RBP16.43■□□□□ 0.22
COMMD6-206ENST00000460675 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
COMMD6-206ENST00000460675 SLC52A1Q9NWF4 448 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms