RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 TNRQ92752 1358 aa26.98■■□□□ 1.91
TMEM50B-205ENST00000459909 ANKLE2Q86XL3 938 aa26.96■■□□□ 1.91
TMEM50B-205ENST00000459909 POLR1AO95602 1720 aaPredicted RBP26.96■■□□□ 1.91
TMEM50B-205ENST00000459909 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
TMEM50B-205ENST00000459909 FBXO31Q5XUX0 539 aaPredicted RBP26.95■■□□□ 1.9
TMEM50B-205ENST00000459909 RTEL1-TNFRSF6BF6WH68 1400 aa26.95■■□□□ 1.9
TMEM50B-205ENST00000459909 PZPP20742 1482 aa26.93■■□□□ 1.9
TMEM50B-205ENST00000459909 THEMISQ8N1K5 641 aaPredicted RBP26.92■■□□□ 1.9
TMEM50B-205ENST00000459909 MBD5Q9P267 1494 aa26.92■■□□□ 1.9
TMEM50B-205ENST00000459909 MTUS2Q5JR59 1369 aa26.91■■□□□ 1.9
TMEM50B-205ENST00000459909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.91■■□□□ 1.9
TMEM50B-205ENST00000459909 VWDEQ8N2E2 1590 aa26.91■■□□□ 1.9
TMEM50B-205ENST00000459909 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
TMEM50B-205ENST00000459909 FAM135AQ9P2D6 1515 aa26.9■■□□□ 1.9
TMEM50B-205ENST00000459909 KIF3BO15066 747 aa26.89■■□□□ 1.9
TMEM50B-205ENST00000459909 KDM5DQ9BY66 1539 aa26.88■■□□□ 1.89
TMEM50B-205ENST00000459909 MED14O60244 1454 aa26.87■■□□□ 1.89
TMEM50B-205ENST00000459909 NPHP4O75161 1426 aaPredicted RBP26.87■■□□□ 1.89
TMEM50B-205ENST00000459909 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
TMEM50B-205ENST00000459909 MIA2Q96PC5 1412 aa26.86■■□□□ 1.89
TMEM50B-205ENST00000459909 NLRP1Q9C000 1473 aa26.86■■□□□ 1.89
TMEM50B-205ENST00000459909 WASHC2CQ9Y4E1 1318 aa26.86■■□□□ 1.89
TMEM50B-205ENST00000459909 UGGT1Q9NYU2 1555 aa26.83■■□□□ 1.89
TMEM50B-205ENST00000459909 DEPDC5O75140 1603 aa26.83■■□□□ 1.88
TMEM50B-205ENST00000459909 TIAM1Q13009 1591 aa26.82■■□□□ 1.88
TMEM50B-205ENST00000459909 LRRC7Q96NW7 1537 aa26.76■■□□□ 1.87
TMEM50B-205ENST00000459909 CCDC141Q6ZP82 1450 aa26.76■■□□□ 1.87
TMEM50B-205ENST00000459909 RSPH4AQ5TD94 716 aa26.76■■□□□ 1.87
TMEM50B-205ENST00000459909 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
TMEM50B-205ENST00000459909 IQGAP1P46940 1657 aa26.75■■□□□ 1.87
TMEM50B-205ENST00000459909 EHBP1L1Q8N3D4 1523 aa26.75■■□□□ 1.87
TMEM50B-205ENST00000459909 CEP162Q5TB80 1403 aa26.74■■□□□ 1.87
TMEM50B-205ENST00000459909 RNF17Q9BXT8 1623 aaKnown RBP26.72■■□□□ 1.87
TMEM50B-205ENST00000459909 SYNMO15061 1565 aa26.71■■□□□ 1.87
TMEM50B-205ENST00000459909 RGS17Q9UGC6 210 aaPredicted RBP26.68■■□□□ 1.86
TMEM50B-205ENST00000459909 STRCP1A6NGW2 1772 aa26.67■■□□□ 1.86
TMEM50B-205ENST00000459909 CAMSAP2Q08AD1 1489 aa26.66■■□□□ 1.86
TMEM50B-205ENST00000459909 TSPY4P0CV99 314 aa26.64■■□□□ 1.86
TMEM50B-205ENST00000459909 TSPY10P0CW01 314 aa26.64■■□□□ 1.86
TMEM50B-205ENST00000459909 ABCC3O15438 1527 aa26.6■■□□□ 1.85
TMEM50B-205ENST00000459909 ERVK-7P63135 1459 aa26.6■■□□□ 1.85
TMEM50B-205ENST00000459909 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
TMEM50B-205ENST00000459909 SCAF11Q99590 1463 aaKnown RBP26.58■■□□□ 1.85
TMEM50B-205ENST00000459909 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
TMEM50B-205ENST00000459909 ZC3H13Q5T200 1668 aaKnown RBP26.57■■□□□ 1.84
TMEM50B-205ENST00000459909 FAM135BQ49AJ0 1406 aa26.53■■□□□ 1.84
TMEM50B-205ENST00000459909 LTKP29376 864 aa26.52■■□□□ 1.84
TMEM50B-205ENST00000459909 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
TMEM50B-205ENST00000459909 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
TMEM50B-205ENST00000459909 UBR1Q8IWV7 1749 aa26.51■■□□□ 1.83
TMEM50B-205ENST00000459909 SLIT1O75093 1534 aa26.5■■□□□ 1.83
TMEM50B-205ENST00000459909 POTEAQ6S8J7 498 aa26.49■■□□□ 1.83
TMEM50B-205ENST00000459909 EIF2AK4Q9P2K8 1649 aaKnown RBP26.48■■□□□ 1.83
TMEM50B-205ENST00000459909 EID1Q9Y6B2 187 aa26.47■■□□□ 1.83
TMEM50B-205ENST00000459909 MAST1Q9Y2H9 1570 aa26.46■■□□□ 1.83
TMEM50B-205ENST00000459909 MROH1Q8NDA8 1641 aa26.45■■□□□ 1.82
TMEM50B-205ENST00000459909 XIRP1Q702N8 1843 aaKnown RBP26.43■■□□□ 1.82
TMEM50B-205ENST00000459909 ARHGAP31Q2M1Z3 1444 aa26.41■■□□□ 1.82
TMEM50B-205ENST00000459909 TMEM94Q12767 1356 aa26.41■■□□□ 1.82
TMEM50B-205ENST00000459909 CEP152O94986 1710 aa26.39■■□□□ 1.81
TMEM50B-205ENST00000459909 TMEM2Q9UHN6 1383 aa26.38■■□□□ 1.81
TMEM50B-205ENST00000459909 KCNA6P17658 529 aa26.36■■□□□ 1.81
TMEM50B-205ENST00000459909 DUOX2Q9NRD8 1548 aa26.35■■□□□ 1.81
TMEM50B-205ENST00000459909 STAG3Q9UJ98 1225 aa26.34■■□□□ 1.81
TMEM50B-205ENST00000459909 PROSER2Q86WR7 435 aaPredicted RBP26.33■■□□□ 1.81
TMEM50B-205ENST00000459909 LRRC9Q6ZRR7 1453 aa26.33■■□□□ 1.81
TMEM50B-205ENST00000459909 ROBO1Q9Y6N7 1651 aa26.33■■□□□ 1.81
TMEM50B-205ENST00000459909 CFAP65Q6ZU64 1925 aaKnown RBP26.32■■□□□ 1.8
TMEM50B-205ENST00000459909 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
TMEM50B-205ENST00000459909 MAP3K1Q13233 1512 aa26.31■■□□□ 1.8
TMEM50B-205ENST00000459909 PIK3C2BO00750 1634 aa26.3■■□□□ 1.8
TMEM50B-205ENST00000459909 MYOM3Q5VTT5 1437 aa26.29■■□□□ 1.8
TMEM50B-205ENST00000459909 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
TMEM50B-205ENST00000459909 ERBINQ96RT1 1412 aa26.27■■□□□ 1.8
TMEM50B-205ENST00000459909 EFCAB6Q5THR3 1501 aa26.27■■□□□ 1.8
TMEM50B-205ENST00000459909 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
TMEM50B-205ENST00000459909 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
TMEM50B-205ENST00000459909 NKTRP30414 1462 aaKnown RBP26.25■■□□□ 1.79
TMEM50B-205ENST00000459909 JCADQ9P266 1359 aa26.25■■□□□ 1.79
TMEM50B-205ENST00000459909 TET3O43151 1660 aa26.25■■□□□ 1.79
TMEM50B-205ENST00000459909 MSH6P52701 1360 aa26.24■■□□□ 1.79
TMEM50B-205ENST00000459909 IDI1Q13907 227 aa26.24■■□□□ 1.79
TMEM50B-205ENST00000459909 KDM5AP29375 1690 aaKnown RBP26.24■■□□□ 1.79
TMEM50B-205ENST00000459909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.79
TMEM50B-205ENST00000459909 KANK1Q14678 1352 aa26.22■■□□□ 1.79
TMEM50B-205ENST00000459909 SLAIN2Q9P270 581 aa26.22■■□□□ 1.79
TMEM50B-205ENST00000459909 SETD1AO15047 1707 aaKnown RBP26.22■■□□□ 1.79
TMEM50B-205ENST00000459909 RRP7BPQ9NSQ0 103 aa26.2■■□□□ 1.78
TMEM50B-205ENST00000459909 NWD1Q149M9 1564 aa26.2■■□□□ 1.78
TMEM50B-205ENST00000459909 PHLPP1O60346 1717 aa26.17■■□□□ 1.78
TMEM50B-205ENST00000459909 KANK4Q5T7N3 995 aaPredicted RBP26.16■■□□□ 1.78
TMEM50B-205ENST00000459909 LMTK2Q8IWU2 1503 aa26.15■■□□□ 1.78
TMEM50B-205ENST00000459909 ABCC5O15440 1437 aa26.14■■□□□ 1.78
TMEM50B-205ENST00000459909 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
TMEM50B-205ENST00000459909 UPF1Q92900 1129 aaKnown RBP eCLIP26.14■■□□□ 1.78
TMEM50B-205ENST00000459909 BCANQ96GW7 911 aa26.14■■□□□ 1.78
TMEM50B-205ENST00000459909 ZNF772Q68DY9 489 aaPredicted RBP26.13■■□□□ 1.77
TMEM50B-205ENST00000459909 NOS1P29475 1434 aa26.13■■□□□ 1.77
TMEM50B-205ENST00000459909 SPATA31A6Q5VVP1 1343 aa26.13■■□□□ 1.77
TMEM50B-205ENST00000459909 SLC52A1Q9NWF4 448 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms