RNA–Protein interactions for RNA: ENST00000459652.1

SEMA3C-206, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-206ENST00000459652 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
SEMA3C-206ENST00000459652 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
SEMA3C-206ENST00000459652 SEMA3EO15041 775 aa9.1□□□□□ -0.95
SEMA3C-206ENST00000459652 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
SEMA3C-206ENST00000459652 ARID3CA6NKF2 412 aa9.09□□□□□ -0.95
SEMA3C-206ENST00000459652 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
SEMA3C-206ENST00000459652 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
SEMA3C-206ENST00000459652 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
SEMA3C-206ENST00000459652 SMYD5Q6GMV2 418 aa9.06□□□□□ -0.96
SEMA3C-206ENST00000459652 FLIIQ13045 1269 aa9.05□□□□□ -0.96
SEMA3C-206ENST00000459652 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
SEMA3C-206ENST00000459652 E2F4Q16254 413 aa9.04□□□□□ -0.96
SEMA3C-206ENST00000459652 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
SEMA3C-206ENST00000459652 LCE2BO14633 110 aa9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 PTPN5P54829 565 aa9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 MYT1Q01538 1121 aa9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 ZNF775Q96BV0 537 aaPredicted RBP9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 TTBK1Q5TCY1 1321 aaPredicted RBP9.03□□□□□ -0.96
SEMA3C-206ENST00000459652 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.96
SEMA3C-206ENST00000459652 NLRP6P59044 892 aa9.02□□□□□ -0.97
SEMA3C-206ENST00000459652 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.97
SEMA3C-206ENST00000459652 A6NJR5 290 aa8.99□□□□□ -0.97
SEMA3C-206ENST00000459652 CCDC82Q8N4S0 544 aa8.99□□□□□ -0.97
SEMA3C-206ENST00000459652 RGS22Q8NE09 1264 aa8.99□□□□□ -0.97
SEMA3C-206ENST00000459652 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
SEMA3C-206ENST00000459652 LHX6Q9UPM6 363 aa8.98□□□□□ -0.97
SEMA3C-206ENST00000459652 RAD21O60216 631 aa8.97□□□□□ -0.97
SEMA3C-206ENST00000459652 TRIM66O15016 1216 aa8.96□□□□□ -0.98
SEMA3C-206ENST00000459652 GFRA3O60609 400 aa8.96□□□□□ -0.98
SEMA3C-206ENST00000459652 PDE4DQ08499 809 aa8.96□□□□□ -0.98
SEMA3C-206ENST00000459652 NUDT7P0C024 238 aa8.95□□□□□ -0.98
SEMA3C-206ENST00000459652 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
SEMA3C-206ENST00000459652 TRAK2O60296 914 aa8.94□□□□□ -0.98
SEMA3C-206ENST00000459652 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
SEMA3C-206ENST00000459652 IGSF3O75054 1194 aa8.94□□□□□ -0.98
SEMA3C-206ENST00000459652 ARIH1Q9Y4X5 557 aaPredicted RBP8.94□□□□□ -0.98
SEMA3C-206ENST00000459652 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
SEMA3C-206ENST00000459652 C2orf72A6NCS6 295 aa8.92□□□□□ -0.98
SEMA3C-206ENST00000459652 NRG2O14511 850 aaPredicted RBP8.92□□□□□ -0.98
SEMA3C-206ENST00000459652 KIF3CO14782 793 aa8.91□□□□□ -0.98
SEMA3C-206ENST00000459652 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
SEMA3C-206ENST00000459652 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
SEMA3C-206ENST00000459652 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
SEMA3C-206ENST00000459652 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
SEMA3C-206ENST00000459652 GPIHBP1Q8IV16 184 aa8.88□□□□□ -0.99
SEMA3C-206ENST00000459652 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 DMRTA1Q5VZB9 504 aa8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 DDRGK1Q96HY6 314 aa8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 MTMR7Q9Y216 660 aa8.87□□□□□ -0.99
SEMA3C-206ENST00000459652 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
SEMA3C-206ENST00000459652 PCDHGA4Q9Y5G9 962 aa8.86□□□□□ -0.99
SEMA3C-206ENST00000459652 SLC34A2O95436 690 aa8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 AEBP1Q8IUX7 1158 aa8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 STK17AQ9UEE5 414 aa8.84□□□□□ -0.99
SEMA3C-206ENST00000459652 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
SEMA3C-206ENST00000459652 SERPINA10Q9UK55 444 aa8.82□□□□□ -1
SEMA3C-206ENST00000459652 PSEN2P49810 448 aa8.8□□□□□ -1
SEMA3C-206ENST00000459652 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
SEMA3C-206ENST00000459652 PPP1R37O75864 691 aa8.79□□□□□ -1
SEMA3C-206ENST00000459652 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
SEMA3C-206ENST00000459652 MFSD10Q14728 455 aa8.79□□□□□ -1
SEMA3C-206ENST00000459652 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
SEMA3C-206ENST00000459652 RBM25P49756 843 aaKnown RBP8.77□□□□□ -1.01
SEMA3C-206ENST00000459652 NCKAP5LQ9HCH0 1330 aa8.77□□□□□ -1.01
SEMA3C-206ENST00000459652 CAMK2BQ13554 666 aa8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 WNT2BQ93097 391 aa8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 CCDC97Q96F63 343 aaPredicted RBP8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 PUS7Q96PZ0 661 aaKnown RBP8.76□□□□□ -1.01
SEMA3C-206ENST00000459652 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
SEMA3C-206ENST00000459652 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
SEMA3C-206ENST00000459652 E9PSI1 815 aa8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 MCM6Q14566 821 aa8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 PROSER2Q86WR7 435 aaPredicted RBP8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 ZNF777Q9ULD5 760 aaPredicted RBP8.74□□□□□ -1.01
SEMA3C-206ENST00000459652 PDE4AP27815 886 aa8.73□□□□□ -1.01
SEMA3C-206ENST00000459652 AMHR2Q16671 573 aa8.73□□□□□ -1.01
SEMA3C-206ENST00000459652 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
SEMA3C-206ENST00000459652 ZNF428Q96B54 188 aa8.73□□□□□ -1.01
SEMA3C-206ENST00000459652 CDK11BP21127 795 aaKnown RBP8.72□□□□□ -1.01
SEMA3C-206ENST00000459652 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
SEMA3C-206ENST00000459652 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
SEMA3C-206ENST00000459652 MINK1Q8N4C8 1332 aaPredicted RBP8.72□□□□□ -1.01
SEMA3C-206ENST00000459652 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
SEMA3C-206ENST00000459652 GPR37O15354 613 aa8.71□□□□□ -1.02
SEMA3C-206ENST00000459652 IRF5Q13568 498 aa8.71□□□□□ -1.02
SEMA3C-206ENST00000459652 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.02
SEMA3C-206ENST00000459652 PTCD2Q8WV60 388 aaKnown RBP8.71□□□□□ -1.02
SEMA3C-206ENST00000459652 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms