RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
PRAMEF35P-201ENST00000458709 TOM1O60784 492 aa18.42■□□□□ 0.54
PRAMEF35P-201ENST00000458709 TNRQ92752 1358 aa18.4■□□□□ 0.54
PRAMEF35P-201ENST00000458709 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
PRAMEF35P-201ENST00000458709 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
PRAMEF35P-201ENST00000458709 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
PRAMEF35P-201ENST00000458709 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
PRAMEF35P-201ENST00000458709 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
PRAMEF35P-201ENST00000458709 PZPP20742 1482 aa18.36■□□□□ 0.53
PRAMEF35P-201ENST00000458709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.36■□□□□ 0.53
PRAMEF35P-201ENST00000458709 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
PRAMEF35P-201ENST00000458709 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
PRAMEF35P-201ENST00000458709 DHX29Q7Z478 1369 aaKnown RBP18.35■□□□□ 0.53
PRAMEF35P-201ENST00000458709 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
PRAMEF35P-201ENST00000458709 RTEL1-TNFRSF6BF6WH68 1400 aa18.33■□□□□ 0.53
PRAMEF35P-201ENST00000458709 KIF3BO15066 747 aa18.32■□□□□ 0.52
PRAMEF35P-201ENST00000458709 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
PRAMEF35P-201ENST00000458709 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
PRAMEF35P-201ENST00000458709 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
PRAMEF35P-201ENST00000458709 MED14O60244 1454 aa18.3■□□□□ 0.52
PRAMEF35P-201ENST00000458709 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
PRAMEF35P-201ENST00000458709 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
PRAMEF35P-201ENST00000458709 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
PRAMEF35P-201ENST00000458709 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
PRAMEF35P-201ENST00000458709 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
PRAMEF35P-201ENST00000458709 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.52
PRAMEF35P-201ENST00000458709 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
PRAMEF35P-201ENST00000458709 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
PRAMEF35P-201ENST00000458709 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
PRAMEF35P-201ENST00000458709 STRCP1A6NGW2 1772 aa18.26■□□□□ 0.51
PRAMEF35P-201ENST00000458709 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
PRAMEF35P-201ENST00000458709 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
PRAMEF35P-201ENST00000458709 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
PRAMEF35P-201ENST00000458709 SYNMO15061 1565 aa18.22■□□□□ 0.51
PRAMEF35P-201ENST00000458709 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
PRAMEF35P-201ENST00000458709 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
PRAMEF35P-201ENST00000458709 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
PRAMEF35P-201ENST00000458709 ABCC3O15438 1527 aa18.17■□□□□ 0.5
PRAMEF35P-201ENST00000458709 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
PRAMEF35P-201ENST00000458709 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
PRAMEF35P-201ENST00000458709 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
PRAMEF35P-201ENST00000458709 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PRAMEF35P-201ENST00000458709 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
PRAMEF35P-201ENST00000458709 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
PRAMEF35P-201ENST00000458709 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
PRAMEF35P-201ENST00000458709 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
PRAMEF35P-201ENST00000458709 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
PRAMEF35P-201ENST00000458709 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
PRAMEF35P-201ENST00000458709 LTKP29376 864 aa18.08■□□□□ 0.48
PRAMEF35P-201ENST00000458709 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
PRAMEF35P-201ENST00000458709 CEP152O94986 1710 aa18.07■□□□□ 0.48
PRAMEF35P-201ENST00000458709 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
PRAMEF35P-201ENST00000458709 SLIT1O75093 1534 aa18.07■□□□□ 0.48
PRAMEF35P-201ENST00000458709 MAST1Q9Y2H9 1570 aa18.06■□□□□ 0.48
PRAMEF35P-201ENST00000458709 POTEAQ6S8J7 498 aa18.06■□□□□ 0.48
PRAMEF35P-201ENST00000458709 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
PRAMEF35P-201ENST00000458709 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
PRAMEF35P-201ENST00000458709 CFAP65Q6ZU64 1925 aaKnown RBP18.01■□□□□ 0.47
PRAMEF35P-201ENST00000458709 TMEM94Q12767 1356 aa18.01■□□□□ 0.47
PRAMEF35P-201ENST00000458709 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
PRAMEF35P-201ENST00000458709 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
PRAMEF35P-201ENST00000458709 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
PRAMEF35P-201ENST00000458709 DUOX2Q9NRD8 1548 aa17.97■□□□□ 0.47
PRAMEF35P-201ENST00000458709 RBM33Q96EV2 1170 aaKnown RBP17.96■□□□□ 0.47
PRAMEF35P-201ENST00000458709 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
PRAMEF35P-201ENST00000458709 EFCAB6Q5THR3 1501 aa17.93■□□□□ 0.46
PRAMEF35P-201ENST00000458709 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
PRAMEF35P-201ENST00000458709 KCNA6P17658 529 aa17.92■□□□□ 0.46
PRAMEF35P-201ENST00000458709 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
PRAMEF35P-201ENST00000458709 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
PRAMEF35P-201ENST00000458709 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
PRAMEF35P-201ENST00000458709 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
PRAMEF35P-201ENST00000458709 ERBINQ96RT1 1412 aa17.9■□□□□ 0.46
PRAMEF35P-201ENST00000458709 TET3O43151 1660 aa17.9■□□□□ 0.46
PRAMEF35P-201ENST00000458709 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
PRAMEF35P-201ENST00000458709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRAMEF35P-201ENST00000458709 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
PRAMEF35P-201ENST00000458709 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
PRAMEF35P-201ENST00000458709 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
PRAMEF35P-201ENST00000458709 PHLPP1O60346 1717 aa17.87■□□□□ 0.45
PRAMEF35P-201ENST00000458709 IDI1Q13907 227 aa17.87■□□□□ 0.45
PRAMEF35P-201ENST00000458709 RRP7BPQ9NSQ0 103 aa17.87■□□□□ 0.45
PRAMEF35P-201ENST00000458709 MSH6P52701 1360 aa17.86■□□□□ 0.45
PRAMEF35P-201ENST00000458709 JCADQ9P266 1359 aa17.86■□□□□ 0.45
PRAMEF35P-201ENST00000458709 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
PRAMEF35P-201ENST00000458709 ABCC5O15440 1437 aa17.85■□□□□ 0.45
PRAMEF35P-201ENST00000458709 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
PRAMEF35P-201ENST00000458709 ADGRB3O60242 1522 aa17.84■□□□□ 0.45
PRAMEF35P-201ENST00000458709 LRP6O75581 1613 aa17.83■□□□□ 0.45
PRAMEF35P-201ENST00000458709 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
PRAMEF35P-201ENST00000458709 KANK1Q14678 1352 aa17.83■□□□□ 0.45
PRAMEF35P-201ENST00000458709 SLAIN2Q9P270 581 aa17.83■□□□□ 0.44
PRAMEF35P-201ENST00000458709 COL16A1Q07092 1604 aaPredicted RBP17.83■□□□□ 0.44
PRAMEF35P-201ENST00000458709 NOS1P29475 1434 aa17.81■□□□□ 0.44
PRAMEF35P-201ENST00000458709 FOXD1Q16676 465 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms