RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 ESF1Q9H501 851 aaKnown RBP33.42■■■□□ 2.94
APOE-204ENST00000446996 FAM135AQ9P2D6 1515 aa33.42■■■□□ 2.94
APOE-204ENST00000446996 RNF17Q9BXT8 1623 aaKnown RBP33.4■■■□□ 2.94
APOE-204ENST00000446996 ITGAEP38570 1179 aa33.37■■■□□ 2.93
APOE-204ENST00000446996 MROH2AA6NES4 1674 aa33.36■■■□□ 2.93
APOE-204ENST00000446996 ANKRD50Q9ULJ7 1429 aa33.33■■■□□ 2.93
APOE-204ENST00000446996 CLTCQ00610 1675 aaKnown RBP33.29■■■□□ 2.92
APOE-204ENST00000446996 DEPDC5O75140 1603 aa33.28■■■□□ 2.92
APOE-204ENST00000446996 MROH1Q8NDA8 1641 aa33.28■■■□□ 2.92
APOE-204ENST00000446996 KDM5DQ9BY66 1539 aa33.28■■■□□ 2.92
APOE-204ENST00000446996 ZMYM3Q14202 1370 aa33.26■■■□□ 2.92
APOE-204ENST00000446996 C3P01024 1663 aa33.26■■■□□ 2.91
APOE-204ENST00000446996 WASHC2CQ9Y4E1 1318 aa33.26■■■□□ 2.91
APOE-204ENST00000446996 PRDM15P57071 1507 aaPredicted RBP33.25■■■□□ 2.91
APOE-204ENST00000446996 ZC3H13Q5T200 1668 aaKnown RBP33.25■■■□□ 2.91
APOE-204ENST00000446996 SETD1BQ9UPS6 1966 aaKnown RBP33.25■■■□□ 2.91
APOE-204ENST00000446996 CEBPAP49715 358 aaPredicted RBP33.2■■■□□ 2.91
APOE-204ENST00000446996 KANK1Q14678 1352 aa33.2■■■□□ 2.9
APOE-204ENST00000446996 ABCC3O15438 1527 aa33.18■■■□□ 2.9
APOE-204ENST00000446996 VWDEQ8N2E2 1590 aa33.17■■■□□ 2.9
APOE-204ENST00000446996 HFM1A2PYH4 1435 aa33.16■■■□□ 2.9
APOE-204ENST00000446996 NAIPQ13075 1403 aa33.16■■■□□ 2.9
APOE-204ENST00000446996 NPATQ14207 1427 aa33.16■■■□□ 2.9
APOE-204ENST00000446996 GCC2Q8IWJ2 1684 aa33.15■■■□□ 2.9
APOE-204ENST00000446996 UNC13BO14795 1591 aa33.13■■■□□ 2.89
APOE-204ENST00000446996 LMTK2Q8IWU2 1503 aa33.12■■■□□ 2.89
APOE-204ENST00000446996 CEP152O94986 1710 aa33.12■■■□□ 2.89
APOE-204ENST00000446996 PLPPR3Q6T4P5 718 aa33.12■■■□□ 2.89
APOE-204ENST00000446996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.12■■■□□ 2.894e-44■□□□□ 8.7
APOE-204ENST00000446996 PZPP20742 1482 aa33.12■■■□□ 2.89
APOE-204ENST00000446996 ARHGAP31Q2M1Z3 1444 aa33.09■■■□□ 2.89
APOE-204ENST00000446996 CAMSAP1Q5T5Y3 1602 aa33.07■■■□□ 2.88
APOE-204ENST00000446996 PREX1Q8TCU6 1659 aa33.06■■■□□ 2.88
APOE-204ENST00000446996 UHRF1BP1Q6BDS2 1440 aa33■■■□□ 2.87
APOE-204ENST00000446996 IQGAP3Q86VI3 1631 aa32.99■■■□□ 2.87
APOE-204ENST00000446996 ACIN1Q9UKV3 1341 aaKnown RBP32.99■■■□□ 2.87
APOE-204ENST00000446996 LMTK3Q96Q04 1460 aa32.98■■■□□ 2.87
APOE-204ENST00000446996 TET3O43151 1660 aa32.97■■■□□ 2.87
APOE-204ENST00000446996 NUP155O75694 1391 aa32.97■■■□□ 2.87
APOE-204ENST00000446996 SPATA31D1Q6ZQQ2 1576 aa32.96■■■□□ 2.87
APOE-204ENST00000446996 FBXO31Q5XUX0 539 aaPredicted RBP32.96■■■□□ 2.87
APOE-204ENST00000446996 EFCAB6Q5THR3 1501 aa32.96■■■□□ 2.87
APOE-204ENST00000446996 TNRQ92752 1358 aa32.94■■■□□ 2.86
APOE-204ENST00000446996 ERVK-7P63135 1459 aa32.93■■■□□ 2.86
APOE-204ENST00000446996 RPRD2Q5VT52 1461 aaKnown RBP32.93■■■□□ 2.86
APOE-204ENST00000446996 CFAP65Q6ZU64 1925 aaKnown RBP32.92■■■□□ 2.86
APOE-204ENST00000446996 SETD5Q9C0A6 1442 aa32.91■■■□□ 2.86
APOE-204ENST00000446996 MYO3AQ8NEV4 1616 aa32.89■■■□□ 2.86
APOE-204ENST00000446996 ZNF142P52746 1687 aaPredicted RBP32.88■■■□□ 2.85
APOE-204ENST00000446996 NLRP1Q9C000 1473 aa32.86■■■□□ 2.85
APOE-204ENST00000446996 A2ML1A8K2U0 1454 aa32.84■■■□□ 2.85
APOE-204ENST00000446996 NOS1P29475 1434 aa32.84■■■□□ 2.85
APOE-204ENST00000446996 CEP170BQ9Y4F5 1589 aaPredicted RBP32.83■■■□□ 2.85
APOE-204ENST00000446996 HRCP23327 699 aa32.82■■■□□ 2.84
APOE-204ENST00000446996 E9PCH4 1651 aa32.82■■■□□ 2.84
APOE-204ENST00000446996 TRIM52Q96A61 297 aa32.81■■■□□ 2.84
APOE-204ENST00000446996 HSPA2P54652 639 aa32.76■■■□□ 2.83
APOE-204ENST00000446996 RAB3GAP2Q9H2M9 1393 aa32.75■■■□□ 2.83
APOE-204ENST00000446996 SLC52A1Q9NWF4 448 aa32.75■■■□□ 2.83
APOE-204ENST00000446996 SYNMO15061 1565 aa32.73■■■□□ 2.83
APOE-204ENST00000446996 TRIM26Q12899 539 aaPredicted RBP32.71■■■□□ 2.83
APOE-204ENST00000446996 UGGT1Q9NYU2 1555 aa32.7■■■□□ 2.83
APOE-204ENST00000446996 THEMISQ8N1K5 641 aaPredicted RBP32.7■■■□□ 2.83
APOE-204ENST00000446996 SLC4A1APQ9BWU0 796 aaKnown RBP32.7■■■□□ 2.83
APOE-204ENST00000446996 PLA2R1Q13018 1463 aa32.69■■■□□ 2.82
APOE-204ENST00000446996 ILDR1Q86SU0 546 aaPredicted RBP32.68■■■□□ 2.82
APOE-204ENST00000446996 KDM5AP29375 1690 aaKnown RBP32.68■■■□□ 2.82
APOE-204ENST00000446996 PTPRTO14522 1441 aa32.68■■■□□ 2.82
APOE-204ENST00000446996 IDI1Q13907 227 aa32.67■■■□□ 2.82
APOE-204ENST00000446996 PKD2Q13563 968 aa32.65■■■□□ 2.82
APOE-204ENST00000446996 PIK3C2BO00750 1634 aa32.64■■■□□ 2.82
APOE-204ENST00000446996 SPHKAPQ2M3C7 1700 aa32.64■■■□□ 2.82
APOE-204ENST00000446996 UBR1Q8IWV7 1749 aa32.64■■■□□ 2.82
APOE-204ENST00000446996 MPHOSPH9Q99550 1183 aa32.64■■■□□ 2.82
APOE-204ENST00000446996 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
APOE-204ENST00000446996 DMRT2Q9Y5R5 561 aa32.59■■■□□ 2.81
APOE-204ENST00000446996 STAG3Q9UJ98 1225 aa32.56■■■□□ 2.8
APOE-204ENST00000446996 TRPM2O94759 1503 aa32.56■■■□□ 2.8
APOE-204ENST00000446996 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
APOE-204ENST00000446996 SLIT1O75093 1534 aa32.53■■■□□ 2.8
APOE-204ENST00000446996 ANKLE2Q86XL3 938 aa32.52■■■□□ 2.8
APOE-204ENST00000446996 ARHGAP23Q9P227 1491 aa32.52■■■□□ 2.8
APOE-204ENST00000446996 TMEM131LA2VDJ0 1609 aa32.5■■■□□ 2.79
APOE-204ENST00000446996 POLR1AO95602 1720 aaPredicted RBP32.49■■■□□ 2.79
APOE-204ENST00000446996 NCKAP5LQ9HCH0 1330 aa32.48■■■□□ 2.79
APOE-204ENST00000446996 TMEM2Q9UHN6 1383 aa32.47■■■□□ 2.79
APOE-204ENST00000446996 MYO5BQ9ULV0 1848 aa32.44■■■□□ 2.78
APOE-204ENST00000446996 CLTCL1P53675 1640 aa32.44■■■□□ 2.78
APOE-204ENST00000446996 MED14O60244 1454 aa32.44■■■□□ 2.78
APOE-204ENST00000446996 HDGFP51858 240 aaKnown RBP32.42■■■□□ 2.78
APOE-204ENST00000446996 FOXD1Q16676 465 aa32.42■■■□□ 2.78
APOE-204ENST00000446996 EID1Q9Y6B2 187 aa32.42■■■□□ 2.78
APOE-204ENST00000446996 KIF1BO60333 1816 aa32.42■■■□□ 2.78
APOE-204ENST00000446996 NEURL4Q96JN8 1562 aa32.41■■■□□ 2.78
APOE-204ENST00000446996 SCAF11Q99590 1463 aaKnown RBP32.4■■■□□ 2.78
APOE-204ENST00000446996 CHGAP10645 457 aaKnown RBP32.39■■■□□ 2.78
APOE-204ENST00000446996 TXNDC2Q86VQ3 553 aa32.39■■■□□ 2.78
APOE-204ENST00000446996 LTKP29376 864 aa32.37■■■□□ 2.77
APOE-204ENST00000446996 CCDC144AA2RUR9 1427 aa32.36■■■□□ 2.77
APOE-204ENST00000446996 NPHP4O75161 1426 aaPredicted RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms