RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 A2MP01023 1474 aa17.3■□□□□ 0.36
HLA-F-221ENST00000444621 GGT6Q6P531 493 aa17.29■□□□□ 0.36
HLA-F-221ENST00000444621 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-221ENST00000444621 POLR1AO95602 1720 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-221ENST00000444621 TOM1O60784 492 aa17.28■□□□□ 0.36
HLA-F-221ENST00000444621 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
HLA-F-221ENST00000444621 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
HLA-F-221ENST00000444621 CPS1P31327 1500 aa17.26■□□□□ 0.35
HLA-F-221ENST00000444621 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-221ENST00000444621 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
HLA-F-221ENST00000444621 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
HLA-F-221ENST00000444621 NEURL4Q96JN8 1562 aa17.24■□□□□ 0.35
HLA-F-221ENST00000444621 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
HLA-F-221ENST00000444621 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
HLA-F-221ENST00000444621 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
HLA-F-221ENST00000444621 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
HLA-F-221ENST00000444621 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
HLA-F-221ENST00000444621 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
HLA-F-221ENST00000444621 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 MYOM3Q5VTT5 1437 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 MIA2Q96PC5 1412 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
HLA-F-221ENST00000444621 TNRQ92752 1358 aa17.17■□□□□ 0.34
HLA-F-221ENST00000444621 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
HLA-F-221ENST00000444621 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
HLA-F-221ENST00000444621 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
HLA-F-221ENST00000444621 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
HLA-F-221ENST00000444621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
HLA-F-221ENST00000444621 PZPP20742 1482 aa17.12■□□□□ 0.33
HLA-F-221ENST00000444621 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
HLA-F-221ENST00000444621 DEPDC5O75140 1603 aa17.11■□□□□ 0.33
HLA-F-221ENST00000444621 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
HLA-F-221ENST00000444621 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
HLA-F-221ENST00000444621 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
HLA-F-221ENST00000444621 MED14O60244 1454 aa17.1■□□□□ 0.33
HLA-F-221ENST00000444621 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
HLA-F-221ENST00000444621 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
HLA-F-221ENST00000444621 KIF3BO15066 747 aa17.09■□□□□ 0.33
HLA-F-221ENST00000444621 UGGT1Q9NYU2 1555 aa17.09■□□□□ 0.33
HLA-F-221ENST00000444621 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
HLA-F-221ENST00000444621 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
HLA-F-221ENST00000444621 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
HLA-F-221ENST00000444621 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
HLA-F-221ENST00000444621 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
HLA-F-221ENST00000444621 WASHC2CQ9Y4E1 1318 aa17.06■□□□□ 0.32
HLA-F-221ENST00000444621 RGS17Q9UGC6 210 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-221ENST00000444621 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
HLA-F-221ENST00000444621 SYNMO15061 1565 aa17.04■□□□□ 0.32
HLA-F-221ENST00000444621 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
HLA-F-221ENST00000444621 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
HLA-F-221ENST00000444621 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
HLA-F-221ENST00000444621 DAPK1P53355 1430 aa16.98■□□□□ 0.31
HLA-F-221ENST00000444621 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
HLA-F-221ENST00000444621 DUOX2Q9NRD8 1548 aa16.97■□□□□ 0.31
HLA-F-221ENST00000444621 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
HLA-F-221ENST00000444621 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
HLA-F-221ENST00000444621 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
HLA-F-221ENST00000444621 ABCC5O15440 1437 aa16.96■□□□□ 0.31
HLA-F-221ENST00000444621 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.31
HLA-F-221ENST00000444621 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
HLA-F-221ENST00000444621 UBR1Q8IWV7 1749 aa16.95■□□□□ 0.3
HLA-F-221ENST00000444621 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
HLA-F-221ENST00000444621 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
HLA-F-221ENST00000444621 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
HLA-F-221ENST00000444621 ABCC3O15438 1527 aa16.93■□□□□ 0.3
HLA-F-221ENST00000444621 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
HLA-F-221ENST00000444621 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
HLA-F-221ENST00000444621 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
HLA-F-221ENST00000444621 KANK1Q14678 1352 aa16.91■□□□□ 0.3
HLA-F-221ENST00000444621 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
HLA-F-221ENST00000444621 CEP152O94986 1710 aa16.9■□□□□ 0.3
HLA-F-221ENST00000444621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-F-221ENST00000444621 LTKP29376 864 aa16.88■□□□□ 0.29
HLA-F-221ENST00000444621 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
HLA-F-221ENST00000444621 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
HLA-F-221ENST00000444621 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
HLA-F-221ENST00000444621 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
HLA-F-221ENST00000444621 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
HLA-F-221ENST00000444621 SLIT1O75093 1534 aa16.86■□□□□ 0.29
HLA-F-221ENST00000444621 ITGAEP38570 1179 aa16.85■□□□□ 0.29
HLA-F-221ENST00000444621 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
HLA-F-221ENST00000444621 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
HLA-F-221ENST00000444621 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
HLA-F-221ENST00000444621 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
HLA-F-221ENST00000444621 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
HLA-F-221ENST00000444621 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
HLA-F-221ENST00000444621 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
HLA-F-221ENST00000444621 RBM33Q96EV2 1170 aaKnown RBP16.78■□□□□ 0.28
HLA-F-221ENST00000444621 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
HLA-F-221ENST00000444621 PHLPP1O60346 1717 aa16.77■□□□□ 0.28
HLA-F-221ENST00000444621 KCNA6P17658 529 aa16.76■□□□□ 0.27
HLA-F-221ENST00000444621 PROSER2Q86WR7 435 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-221ENST00000444621 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
HLA-F-221ENST00000444621 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
HLA-F-221ENST00000444621 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
HLA-F-221ENST00000444621 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
HLA-F-221ENST00000444621 TET3O43151 1660 aa16.72■□□□□ 0.27
HLA-F-221ENST00000444621 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms