RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 CPS1P31327 1500 aa12.1□□□□□ -0.47
RPSA-202ENST00000443003 EHBP1L1Q8N3D4 1523 aa12.1□□□□□ -0.47
RPSA-202ENST00000443003 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
RPSA-202ENST00000443003 HSPA1LP34931 641 aa12.09□□□□□ -0.47
RPSA-202ENST00000443003 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
RPSA-202ENST00000443003 TNRQ92752 1358 aa12.08□□□□□ -0.48
RPSA-202ENST00000443003 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
RPSA-202ENST00000443003 PZPP20742 1482 aa12.07□□□□□ -0.48
RPSA-202ENST00000443003 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
RPSA-202ENST00000443003 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
RPSA-202ENST00000443003 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
RPSA-202ENST00000443003 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 KIF3BO15066 747 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 TOM1O60784 492 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
RPSA-202ENST00000443003 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
RPSA-202ENST00000443003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48not detected■■■□□ 15.5
RPSA-202ENST00000443003 STRCP1A6NGW2 1772 aa12.04□□□□□ -0.48
RPSA-202ENST00000443003 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
RPSA-202ENST00000443003 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
RPSA-202ENST00000443003 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
RPSA-202ENST00000443003 ALKQ9UM73 1620 aa12.03□□□□□ -0.48
RPSA-202ENST00000443003 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
RPSA-202ENST00000443003 NPHP4O75161 1426 aaPredicted RBP12.03□□□□□ -0.48
RPSA-202ENST00000443003 RNF17Q9BXT8 1623 aaKnown RBP12.02□□□□□ -0.49
RPSA-202ENST00000443003 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
RPSA-202ENST00000443003 CEP162Q5TB80 1403 aa12.02□□□□□ -0.49
RPSA-202ENST00000443003 SYNMO15061 1565 aa12.01□□□□□ -0.49
RPSA-202ENST00000443003 ZC3H13Q5T200 1668 aaKnown RBP12.01□□□□□ -0.49
RPSA-202ENST00000443003 CEP152O94986 1710 aa12.01□□□□□ -0.49
RPSA-202ENST00000443003 ANKLE2Q86XL3 938 aa12.01□□□□□ -0.49
RPSA-202ENST00000443003 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
RPSA-202ENST00000443003 NCOA2Q15596 1464 aa12□□□□□ -0.49
RPSA-202ENST00000443003 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
RPSA-202ENST00000443003 MED14O60244 1454 aa11.98□□□□□ -0.49
RPSA-202ENST00000443003 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
RPSA-202ENST00000443003 UBR1Q8IWV7 1749 aa11.97□□□□□ -0.49
RPSA-202ENST00000443003 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
RPSA-202ENST00000443003 ABCC3O15438 1527 aa11.97□□□□□ -0.49
RPSA-202ENST00000443003 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.49
RPSA-202ENST00000443003 FOXD1Q16676 465 aa11.95□□□□□ -0.5
RPSA-202ENST00000443003 EIF2AK4Q9P2K8 1649 aaKnown RBP11.95□□□□□ -0.5
RPSA-202ENST00000443003 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
RPSA-202ENST00000443003 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
RPSA-202ENST00000443003 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
RPSA-202ENST00000443003 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
RPSA-202ENST00000443003 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
RPSA-202ENST00000443003 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
RPSA-202ENST00000443003 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
RPSA-202ENST00000443003 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
RPSA-202ENST00000443003 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
RPSA-202ENST00000443003 CROCC2H7BZ55 1655 aa11.88□□□□□ -0.51
RPSA-202ENST00000443003 SETD1AO15047 1707 aaKnown RBP11.87□□□□□ -0.51
RPSA-202ENST00000443003 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
RPSA-202ENST00000443003 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
RPSA-202ENST00000443003 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
RPSA-202ENST00000443003 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
RPSA-202ENST00000443003 SLIT1O75093 1534 aa11.86□□□□□ -0.51
RPSA-202ENST00000443003 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
RPSA-202ENST00000443003 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
RPSA-202ENST00000443003 LTKP29376 864 aa11.84□□□□□ -0.51
RPSA-202ENST00000443003 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
RPSA-202ENST00000443003 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
RPSA-202ENST00000443003 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
RPSA-202ENST00000443003 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
RPSA-202ENST00000443003 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
RPSA-202ENST00000443003 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
RPSA-202ENST00000443003 KIF15Q9NS87 1388 aa11.81□□□□□ -0.52
RPSA-202ENST00000443003 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
RPSA-202ENST00000443003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPSA-202ENST00000443003 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
RPSA-202ENST00000443003 TMEM94Q12767 1356 aa11.8□□□□□ -0.52
RPSA-202ENST00000443003 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
RPSA-202ENST00000443003 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
RPSA-202ENST00000443003 KDM5AP29375 1690 aaKnown RBP11.8□□□□□ -0.52
RPSA-202ENST00000443003 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
RPSA-202ENST00000443003 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
RPSA-202ENST00000443003 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
RPSA-202ENST00000443003 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
RPSA-202ENST00000443003 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
RPSA-202ENST00000443003 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
RPSA-202ENST00000443003 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
RPSA-202ENST00000443003 RRP7BPQ9NSQ0 103 aa11.78□□□□□ -0.52
RPSA-202ENST00000443003 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
RPSA-202ENST00000443003 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
RPSA-202ENST00000443003 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.53
RPSA-202ENST00000443003 KANK1Q14678 1352 aa11.77□□□□□ -0.53
RPSA-202ENST00000443003 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
RPSA-202ENST00000443003 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
RPSA-202ENST00000443003 BCANQ96GW7 911 aa11.76□□□□□ -0.53
RPSA-202ENST00000443003 ABCC5O15440 1437 aa11.76□□□□□ -0.53
RPSA-202ENST00000443003 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
RPSA-202ENST00000443003 TET3O43151 1660 aa11.75□□□□□ -0.53
RPSA-202ENST00000443003 DAPK1P53355 1430 aa11.75□□□□□ -0.53
RPSA-202ENST00000443003 LOC105371045A0A1W2PR82 267 aa11.74□□□□□ -0.53
RPSA-202ENST00000443003 KCNA6P17658 529 aa11.74□□□□□ -0.53
RPSA-202ENST00000443003 MSH6P52701 1360 aa11.74□□□□□ -0.53
RPSA-202ENST00000443003 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms