RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 HS3ST6Q96QI5 342 aa5.74□□□□□ -1.49
R3HDM1-209ENST00000441871 USP35Q9P2H5 1018 aa5.74□□□□□ -1.49
R3HDM1-209ENST00000441871 ZNF316A6NFI3 1004 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 APBB1O00213 710 aa5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 DSG2Q14126 1118 aa5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 PPP1R15BQ5SWA1 713 aa5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 FOXD4L5Q5VV16 416 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 FAM177A1Q8N128 213 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 FOXD4L4Q8WXT5 416 aaPredicted RBP5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 ZNF592Q92610 1267 aa5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 PSMD1Q99460 953 aa5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 LARP6Q9BRS8 491 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-209ENST00000441871 SLC34A2O95436 690 aa5.72□□□□□ -1.49
R3HDM1-209ENST00000441871 VARS2Q5ST30 1063 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-209ENST00000441871 GPR153Q6NV75 609 aa5.72□□□□□ -1.49
R3HDM1-209ENST00000441871 DDX27Q96GQ7 796 aaKnown RBP5.72□□□□□ -1.49
R3HDM1-209ENST00000441871 PCDHGA4Q9Y5G9 962 aa5.72□□□□□ -1.49
R3HDM1-209ENST00000441871 E9PSI1 815 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 NUDT7P0C024 238 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 TMCO4Q5TGY1 634 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 CERS3Q8IU89 383 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 CRISPLD2Q9H0B8 497 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 BRPF3Q9ULD4 1205 aa5.71□□□□□ -1.5
R3HDM1-209ENST00000441871 LMOD2Q6P5Q4 547 aa5.7□□□□□ -1.5
R3HDM1-209ENST00000441871 UPF1Q92900 1129 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-209ENST00000441871 CWC22Q9HCG8 908 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-209ENST00000441871 PSDA5PKW4 1024 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 MFAP1P55081 439 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 CC2D2BQ6DHV5 1058 aa5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 AEBP1Q8IUX7 1158 aa5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 KHSRPQ92945 711 aaKnown RBP eCLIP5.69□□□□□ -1.58e-8■■■■□ 25.7
R3HDM1-209ENST00000441871 TRAIPQ9BWF2 469 aa5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 WDR70Q9NW82 654 aa5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 ARID4BQ4LE39 1312 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-209ENST00000441871 PTCD2Q8WV60 388 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-209ENST00000441871 CCDC136Q96JN2 1154 aa5.68□□□□□ -1.5
R3HDM1-209ENST00000441871 NCKAP5LQ9HCH0 1330 aa5.68□□□□□ -1.5
R3HDM1-209ENST00000441871 PPM1GO15355 546 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-209ENST00000441871 ZEB1P37275 1124 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-209ENST00000441871 IRX6P78412 446 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-209ENST00000441871 MAP3K9P80192 1104 aa5.67□□□□□ -1.5
R3HDM1-209ENST00000441871 KCNH8Q96L42 1107 aa5.67□□□□□ -1.5
R3HDM1-209ENST00000441871 ZNF687Q8N1G0 1237 aa5.66□□□□□ -1.5
R3HDM1-209ENST00000441871 NAP1L5Q96NT1 182 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-209ENST00000441871 LHX6Q9UPM6 363 aa5.66□□□□□ -1.5
R3HDM1-209ENST00000441871 TMED8Q6PL24 325 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-209ENST00000441871 A0A0U1RQG5 324 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 MFSD10Q14728 455 aa5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 PPP4R3BQ5MIZ7 849 aa5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 CADPS2Q86UW7 1296 aa5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 OXER1Q8TDS5 423 aa5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 SLC24A3Q9HC58 644 aa5.64□□□□□ -1.51
R3HDM1-209ENST00000441871 POTEB3A0JP26 581 aa5.63□□□□□ -1.51
R3HDM1-209ENST00000441871 PBX2P40425 430 aa5.63□□□□□ -1.51
R3HDM1-209ENST00000441871 POTEBQ6S5H4 581 aa5.63□□□□□ -1.51
R3HDM1-209ENST00000441871 EVI5O60447 810 aa5.62□□□□□ -1.51
R3HDM1-209ENST00000441871 CCDC82Q8N4S0 544 aa5.62□□□□□ -1.51
R3HDM1-209ENST00000441871 NCLP19338 710 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-209ENST00000441871 ANKRD13DQ6ZTN6 518 aa5.61□□□□□ -1.51
R3HDM1-209ENST00000441871 ZNF454Q8N9F8 522 aa5.61□□□□□ -1.51
R3HDM1-209ENST00000441871 STAC3Q96MF2 364 aa5.61□□□□□ -1.51
R3HDM1-209ENST00000441871 AAMPQ13685 434 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 CCDC27Q2M243 656 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 CCDC125Q86Z20 511 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 SPNS2Q8IVW8 549 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 PRDM16Q9HAZ2 1276 aa5.6□□□□□ -1.51
R3HDM1-209ENST00000441871 ARHGAP33O14559 1287 aa5.59□□□□□ -1.51
R3HDM1-209ENST00000441871 CENPBP07199 599 aaPredicted RBP5.59□□□□□ -1.51
R3HDM1-209ENST00000441871 E2F4Q16254 413 aa5.59□□□□□ -1.51
R3HDM1-209ENST00000441871 TEX2Q8IWB9 1127 aa5.59□□□□□ -1.51
R3HDM1-209ENST00000441871 ZC3H15Q8WU90 426 aaKnown RBP5.59□□□□□ -1.51
R3HDM1-209ENST00000441871 PTGER2P43116 358 aa5.58□□□□□ -1.52
R3HDM1-209ENST00000441871 LSM11P83369 360 aaKnown RBP eCLIP5.58□□□□□ -1.52
R3HDM1-209ENST00000441871 ZNF526Q8TF50 670 aaPredicted RBP5.58□□□□□ -1.52
R3HDM1-209ENST00000441871 DPYSL4O14531 572 aa5.57□□□□□ -1.52
R3HDM1-209ENST00000441871 SETQ01105 290 aaPredicted RBP5.57□□□□□ -1.52
R3HDM1-209ENST00000441871 EMILIN3Q9NT22 766 aa5.57□□□□□ -1.52
R3HDM1-209ENST00000441871 AXIN2Q9Y2T1 843 aa5.57□□□□□ -1.52
R3HDM1-209ENST00000441871 KDM4AO75164 1064 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 PTPREP23469 700 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 MMRN1Q13201 1228 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 CAMK2BQ13554 666 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 JPH4Q96JJ6 628 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 KCNK17Q96T54 332 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
R3HDM1-209ENST00000441871 KDM4FA0A1W2PPD8 638 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 FOSBP53539 338 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 P3H3Q8IVL6 736 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 IL27Q8NEV9 243 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 ZDHHC16Q969W1 377 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 ANO8Q9HCE9 1232 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 MYT1LQ9UL68 1186 aa5.55□□□□□ -1.52
R3HDM1-209ENST00000441871 CLSPNQ9HAW4 1339 aa5.54□□□□□ -1.52
R3HDM1-209ENST00000441871 SPDYE16A6NNV3 312 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-209ENST00000441871 CANXP27824 592 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-209ENST00000441871 PSEN2P49810 448 aa5.54□□□□□ -1.52
R3HDM1-209ENST00000441871 FBXW7Q969H0 707 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms