RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KDM5DQ9BY66 1539 aa31.18■■■□□ 2.58
VPS13B-204ENST00000441350 KIF3BO15066 747 aa31.17■■■□□ 2.58
VPS13B-204ENST00000441350 NUP155O75694 1391 aa31.15■■■□□ 2.58
VPS13B-204ENST00000441350 RNF17Q9BXT8 1623 aaKnown RBP31.15■■■□□ 2.58
VPS13B-204ENST00000441350 PZPP20742 1482 aa31.14■■■□□ 2.58
VPS13B-204ENST00000441350 AGLP35573 1532 aa31.13■■■□□ 2.57
VPS13B-204ENST00000441350 MROH1Q8NDA8 1641 aa31.13■■■□□ 2.57
VPS13B-204ENST00000441350 CCER1Q8TC90 406 aaPredicted RBP31.13■■■□□ 2.57
VPS13B-204ENST00000441350 SIGLEC1Q9BZZ2 1709 aa31.11■■■□□ 2.57
VPS13B-204ENST00000441350 MPHOSPH9Q99550 1183 aa31.1■■■□□ 2.57
VPS13B-204ENST00000441350 PRDM15P57071 1507 aaPredicted RBP31.1■■■□□ 2.57
VPS13B-204ENST00000441350 IQGAP3Q86VI3 1631 aa31.1■■■□□ 2.57
VPS13B-204ENST00000441350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.09■■■□□ 2.572e-6■■□□□ 13.6
VPS13B-204ENST00000441350 FAM135AQ9P2D6 1515 aa31.07■■■□□ 2.57
VPS13B-204ENST00000441350 VWDEQ8N2E2 1590 aa31.07■■■□□ 2.56
VPS13B-204ENST00000441350 SLC4A1APQ9BWU0 796 aaKnown RBP31.06■■■□□ 2.56
VPS13B-204ENST00000441350 KANK1Q14678 1352 aa31.02■■■□□ 2.56
VPS13B-204ENST00000441350 GGT6Q6P531 493 aa31.01■■■□□ 2.55
VPS13B-204ENST00000441350 CLSPNQ9HAW4 1339 aa31■■■□□ 2.55
VPS13B-204ENST00000441350 LMTK2Q8IWU2 1503 aa30.96■■■□□ 2.55
VPS13B-204ENST00000441350 PKD2Q13563 968 aa30.95■■■□□ 2.55
VPS13B-204ENST00000441350 TET3O43151 1660 aa30.94■■■□□ 2.54
VPS13B-204ENST00000441350 ABCC3O15438 1527 aa30.92■■■□□ 2.54
VPS13B-204ENST00000441350 CEP152O94986 1710 aa30.92■■■□□ 2.54
VPS13B-204ENST00000441350 PPP6R1Q9UPN7 881 aa30.91■■■□□ 2.54
VPS13B-204ENST00000441350 FOXD1Q16676 465 aa30.91■■■□□ 2.54
VPS13B-204ENST00000441350 ZC3H13Q5T200 1668 aaKnown RBP30.9■■■□□ 2.54
VPS13B-204ENST00000441350 ARID4BQ4LE39 1312 aaPredicted RBP30.89■■■□□ 2.54
VPS13B-204ENST00000441350 WASHC2CQ9Y4E1 1318 aa30.89■■■□□ 2.54
VPS13B-204ENST00000441350 E9PCH4 1651 aa30.87■■■□□ 2.53
VPS13B-204ENST00000441350 EFCAB6Q5THR3 1501 aa30.86■■■□□ 2.53
VPS13B-204ENST00000441350 ANKRD30BQ9BXX2 1392 aa30.86■■■□□ 2.53
VPS13B-204ENST00000441350 MLECQ14165 292 aa30.84■■■□□ 2.53
VPS13B-204ENST00000441350 CAMSAP1Q5T5Y3 1602 aa30.83■■■□□ 2.53
VPS13B-204ENST00000441350 RPRD2Q5VT52 1461 aaKnown RBP30.78■■■□□ 2.52
VPS13B-204ENST00000441350 ARHGAP31Q2M1Z3 1444 aa30.78■■■□□ 2.52
VPS13B-204ENST00000441350 CLTCQ00610 1675 aaKnown RBP30.78■■■□□ 2.52
VPS13B-204ENST00000441350 SIN3AQ96ST3 1273 aa30.76■■■□□ 2.52
VPS13B-204ENST00000441350 PLA2R1Q13018 1463 aa30.76■■■□□ 2.52
VPS13B-204ENST00000441350 NPATQ14207 1427 aa30.76■■■□□ 2.52
VPS13B-204ENST00000441350 PTPRTO14522 1441 aa30.74■■■□□ 2.51
VPS13B-204ENST00000441350 SPHKAPQ2M3C7 1700 aa30.71■■■□□ 2.51
VPS13B-204ENST00000441350 CNTLNQ9NXG0 1405 aa30.71■■■□□ 2.51
VPS13B-204ENST00000441350 ZEB1P37275 1124 aaPredicted RBP30.69■■■□□ 2.5
VPS13B-204ENST00000441350 ESF1Q9H501 851 aaKnown RBP30.69■■■□□ 2.5
VPS13B-204ENST00000441350 TRPM2O94759 1503 aa30.68■■■□□ 2.5
VPS13B-204ENST00000441350 NEUROD1Q13562 356 aa30.67■■■□□ 2.5
VPS13B-204ENST00000441350 MROH2AA6NES4 1674 aa30.67■■■□□ 2.5
VPS13B-204ENST00000441350 FER1L4A9Z1Z3 1794 aa30.66■■■□□ 2.5
VPS13B-204ENST00000441350 CFAP65Q6ZU64 1925 aaKnown RBP30.65■■■□□ 2.5
VPS13B-204ENST00000441350 ZMYM3Q14202 1370 aa30.64■■■□□ 2.5
VPS13B-204ENST00000441350 NOS1P29475 1434 aa30.64■■■□□ 2.5
VPS13B-204ENST00000441350 ADAMTSL3P82987 1691 aa30.63■■■□□ 2.49
VPS13B-204ENST00000441350 CCDC144AA2RUR9 1427 aa30.63■■■□□ 2.49
VPS13B-204ENST00000441350 PREX1Q8TCU6 1659 aa30.61■■■□□ 2.49
VPS13B-204ENST00000441350 MADDQ8WXG6 1647 aa30.59■■■□□ 2.49
VPS13B-204ENST00000441350 ERVK-7P63135 1459 aa30.58■■■□□ 2.49
VPS13B-204ENST00000441350 CLTCL1P53675 1640 aa30.58■■■□□ 2.49
VPS13B-204ENST00000441350 TIMELESSQ9UNS1 1208 aa30.58■■■□□ 2.49
VPS13B-204ENST00000441350 SYNMO15061 1565 aa30.57■■■□□ 2.48
VPS13B-204ENST00000441350 FBXO31Q5XUX0 539 aaPredicted RBP30.57■■■□□ 2.48
VPS13B-204ENST00000441350 SPATA31D1Q6ZQQ2 1576 aa30.56■■■□□ 2.48
VPS13B-204ENST00000441350 UGGT1Q9NYU2 1555 aa30.53■■■□□ 2.48
VPS13B-204ENST00000441350 C3P01024 1663 aa30.53■■■□□ 2.48
VPS13B-204ENST00000441350 PIK3C2BO00750 1634 aa30.52■■■□□ 2.48
VPS13B-204ENST00000441350 TONSLQ96HA7 1378 aa30.52■■■□□ 2.48
VPS13B-204ENST00000441350 RIMS1Q86UR5 1692 aaKnown RBP30.51■■■□□ 2.48
VPS13B-204ENST00000441350 SPATA31E1Q6ZUB1 1445 aa30.47■■■□□ 2.47
VPS13B-204ENST00000441350 SLC52A1Q9NWF4 448 aa30.47■■■□□ 2.47
VPS13B-204ENST00000441350 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
VPS13B-204ENST00000441350 NEURL4Q96JN8 1562 aa30.45■■■□□ 2.47
VPS13B-204ENST00000441350 KIF1BO60333 1816 aa30.44■■■□□ 2.46
VPS13B-204ENST00000441350 L3MBTL2Q969R5 705 aa30.44■■■□□ 2.46
VPS13B-204ENST00000441350 IDI1Q13907 227 aa30.43■■■□□ 2.46
VPS13B-204ENST00000441350 TNRQ92752 1358 aa30.41■■■□□ 2.46
VPS13B-204ENST00000441350 ADGRB3O60242 1522 aa30.39■■■□□ 2.45
VPS13B-204ENST00000441350 PPP1R15AO75807 674 aaPredicted RBP30.37■■■□□ 2.45
VPS13B-204ENST00000441350 RGL3Q3MIN7 710 aa30.36■■■□□ 2.45
VPS13B-204ENST00000441350 PTPRMP28827 1452 aa30.34■■■□□ 2.45
VPS13B-204ENST00000441350 TMEM131LA2VDJ0 1609 aa30.34■■■□□ 2.45
VPS13B-204ENST00000441350 PLPPR3Q6T4P5 718 aa30.31■■■□□ 2.44
VPS13B-204ENST00000441350 NLRP1Q9C000 1473 aa30.3■■■□□ 2.44
VPS13B-204ENST00000441350 CHGAP10645 457 aaKnown RBP30.3■■■□□ 2.44
VPS13B-204ENST00000441350 DCAF11Q8TEB1 546 aa30.29■■■□□ 2.44
VPS13B-204ENST00000441350 MYO5BQ9ULV0 1848 aa30.28■■■□□ 2.44
VPS13B-204ENST00000441350 KDM4FA0A1W2PPD8 638 aa30.28■■■□□ 2.44
VPS13B-204ENST00000441350 KDM5AP29375 1690 aaKnown RBP30.26■■■□□ 2.44
VPS13B-204ENST00000441350 IFT172Q9UG01 1749 aa30.25■■■□□ 2.43
VPS13B-204ENST00000441350 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
VPS13B-204ENST00000441350 MYO3AQ8NEV4 1616 aa30.24■■■□□ 2.43
VPS13B-204ENST00000441350 SETD1BQ9UPS6 1966 aaKnown RBP30.23■■■□□ 2.43
VPS13B-204ENST00000441350 STAC3Q96MF2 364 aa30.23■■■□□ 2.43
VPS13B-204ENST00000441350 RPGRIP1LQ68CZ1 1315 aa30.23■■■□□ 2.43
VPS13B-204ENST00000441350 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
VPS13B-204ENST00000441350 ZNF326Q5BKZ1 582 aaKnown RBP30.22■■■□□ 2.43
VPS13B-204ENST00000441350 KDM2AQ9Y2K7 1162 aa30.22■■■□□ 2.43
VPS13B-204ENST00000441350 UBR1Q8IWV7 1749 aa30.21■■■□□ 2.43
VPS13B-204ENST00000441350 PPLO60437 1756 aa30.21■■■□□ 2.43
VPS13B-204ENST00000441350 STAG3Q9UJ98 1225 aa30.21■■■□□ 2.43
VPS13B-204ENST00000441350 NBPF8Q3BBV2 869 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms