RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
SCRN1-208ENST00000438497 KIF3BO15066 747 aa14.13□□□□□ -0.15
SCRN1-208ENST00000438497 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
SCRN1-208ENST00000438497 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
SCRN1-208ENST00000438497 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
SCRN1-208ENST00000438497 WASHC2CQ9Y4E1 1318 aa14.12□□□□□ -0.15
SCRN1-208ENST00000438497 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
SCRN1-208ENST00000438497 DHX29Q7Z478 1369 aaKnown RBP14.1□□□□□ -0.15
SCRN1-208ENST00000438497 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
SCRN1-208ENST00000438497 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
SCRN1-208ENST00000438497 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
SCRN1-208ENST00000438497 ZNF644Q9H582 1327 aaPredicted RBP14.1□□□□□ -0.15
SCRN1-208ENST00000438497 VWDEQ8N2E2 1590 aa14.09□□□□□ -0.15
SCRN1-208ENST00000438497 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
SCRN1-208ENST00000438497 MIA2Q96PC5 1412 aa14.08□□□□□ -0.15
SCRN1-208ENST00000438497 MED14O60244 1454 aa14.06□□□□□ -0.16
SCRN1-208ENST00000438497 LRRC7Q96NW7 1537 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 UGGT1Q9NYU2 1555 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 POTEAQ6S8J7 498 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 PZPP20742 1482 aa14.05□□□□□ -0.16
SCRN1-208ENST00000438497 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
SCRN1-208ENST00000438497 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
SCRN1-208ENST00000438497 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
SCRN1-208ENST00000438497 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
SCRN1-208ENST00000438497 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.16
SCRN1-208ENST00000438497 MBD5Q9P267 1494 aa14.02□□□□□ -0.16
SCRN1-208ENST00000438497 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
SCRN1-208ENST00000438497 RSPH4AQ5TD94 716 aa14.01□□□□□ -0.17
SCRN1-208ENST00000438497 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
SCRN1-208ENST00000438497 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
SCRN1-208ENST00000438497 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
SCRN1-208ENST00000438497 TXNDC2Q86VQ3 553 aa13.98□□□□□ -0.17
SCRN1-208ENST00000438497 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
SCRN1-208ENST00000438497 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
SCRN1-208ENST00000438497 LTKP29376 864 aa13.95□□□□□ -0.18
SCRN1-208ENST00000438497 CFAP65Q6ZU64 1925 aaKnown RBP13.95□□□□□ -0.18
SCRN1-208ENST00000438497 SYNMO15061 1565 aa13.95□□□□□ -0.18
SCRN1-208ENST00000438497 EID1Q9Y6B2 187 aa13.93□□□□□ -0.18
SCRN1-208ENST00000438497 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
SCRN1-208ENST00000438497 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
SCRN1-208ENST00000438497 CCDC141Q6ZP82 1450 aa13.92□□□□□ -0.18
SCRN1-208ENST00000438497 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
SCRN1-208ENST00000438497 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
SCRN1-208ENST00000438497 SCAF11Q99590 1463 aaKnown RBP13.89□□□□□ -0.19
SCRN1-208ENST00000438497 KCNA6P17658 529 aa13.88□□□□□ -0.19
SCRN1-208ENST00000438497 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
SCRN1-208ENST00000438497 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
SCRN1-208ENST00000438497 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
SCRN1-208ENST00000438497 TMEM94Q12767 1356 aa13.87□□□□□ -0.19
SCRN1-208ENST00000438497 UPF1Q92900 1129 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCRN1-208ENST00000438497 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
SCRN1-208ENST00000438497 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
SCRN1-208ENST00000438497 CAMSAP2Q08AD1 1489 aa13.86□□□□□ -0.19
SCRN1-208ENST00000438497 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
SCRN1-208ENST00000438497 ABCC3O15438 1527 aa13.85□□□□□ -0.19
SCRN1-208ENST00000438497 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
SCRN1-208ENST00000438497 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
SCRN1-208ENST00000438497 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
SCRN1-208ENST00000438497 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
SCRN1-208ENST00000438497 ROBO1Q9Y6N7 1651 aa13.84□□□□□ -0.19
SCRN1-208ENST00000438497 SLIT1O75093 1534 aa13.84□□□□□ -0.19
SCRN1-208ENST00000438497 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
SCRN1-208ENST00000438497 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
SCRN1-208ENST00000438497 JCADQ9P266 1359 aa13.82□□□□□ -0.2
SCRN1-208ENST00000438497 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
SCRN1-208ENST00000438497 MEX3CQ5U5Q3 659 aaKnown RBP13.81□□□□□ -0.2
SCRN1-208ENST00000438497 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
SCRN1-208ENST00000438497 BCANQ96GW7 911 aa13.81□□□□□ -0.2
SCRN1-208ENST00000438497 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
SCRN1-208ENST00000438497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCRN1-208ENST00000438497 CEP152O94986 1710 aa13.79□□□□□ -0.2
SCRN1-208ENST00000438497 IDI1Q13907 227 aa13.79□□□□□ -0.2
SCRN1-208ENST00000438497 MSH6P52701 1360 aa13.79□□□□□ -0.2
SCRN1-208ENST00000438497 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
SCRN1-208ENST00000438497 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
SCRN1-208ENST00000438497 RXRBP28702 533 aa13.77□□□□□ -0.21
SCRN1-208ENST00000438497 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
SCRN1-208ENST00000438497 ARHGAP31Q2M1Z3 1444 aa13.76□□□□□ -0.21
SCRN1-208ENST00000438497 SPATA31A6Q5VVP1 1343 aa13.76□□□□□ -0.21
SCRN1-208ENST00000438497 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
SCRN1-208ENST00000438497 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
SCRN1-208ENST00000438497 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
SCRN1-208ENST00000438497 TET3O43151 1660 aa13.74□□□□□ -0.21
SCRN1-208ENST00000438497 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
SCRN1-208ENST00000438497 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SCRN1-208ENST00000438497 RRP7BPQ9NSQ0 103 aa13.73□□□□□ -0.21
SCRN1-208ENST00000438497 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
SCRN1-208ENST00000438497 DUOX2Q9NRD8 1548 aa13.72□□□□□ -0.21
SCRN1-208ENST00000438497 KANK1Q14678 1352 aa13.71□□□□□ -0.21
SCRN1-208ENST00000438497 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
SCRN1-208ENST00000438497 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
SCRN1-208ENST00000438497 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
SCRN1-208ENST00000438497 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
SCRN1-208ENST00000438497 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.21
SCRN1-208ENST00000438497 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SCRN1-208ENST00000438497 LRP6O75581 1613 aa13.69□□□□□ -0.22
SCRN1-208ENST00000438497 SLC52A1Q9NWF4 448 aa13.69□□□□□ -0.22
SCRN1-208ENST00000438497 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms