RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
LMBR1-206ENST00000430825 TNRQ92752 1358 aa27.3■■□□□ 1.96
LMBR1-206ENST00000430825 POLR1AO95602 1720 aaPredicted RBP27.28■■□□□ 1.96
LMBR1-206ENST00000430825 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
LMBR1-206ENST00000430825 ZNF644Q9H582 1327 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-206ENST00000430825 ANKLE2Q86XL3 938 aa27.27■■□□□ 1.96
LMBR1-206ENST00000430825 NEURL4Q96JN8 1562 aa27.26■■□□□ 1.96
LMBR1-206ENST00000430825 FAM135AQ9P2D6 1515 aa27.26■■□□□ 1.95
LMBR1-206ENST00000430825 FBXO31Q5XUX0 539 aaPredicted RBP27.25■■□□□ 1.95
LMBR1-206ENST00000430825 PZPP20742 1482 aa27.25■■□□□ 1.95
LMBR1-206ENST00000430825 THEMISQ8N1K5 641 aaPredicted RBP27.24■■□□□ 1.95
LMBR1-206ENST00000430825 KIF3BO15066 747 aa27.23■■□□□ 1.95
LMBR1-206ENST00000430825 KDM5DQ9BY66 1539 aa27.21■■□□□ 1.95
LMBR1-206ENST00000430825 TIAM1Q13009 1591 aa27.21■■□□□ 1.95
LMBR1-206ENST00000430825 WASHC2CQ9Y4E1 1318 aa27.19■■□□□ 1.94
LMBR1-206ENST00000430825 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
LMBR1-206ENST00000430825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.94
LMBR1-206ENST00000430825 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
LMBR1-206ENST00000430825 MIA2Q96PC5 1412 aa27.17■■□□□ 1.94
LMBR1-206ENST00000430825 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
LMBR1-206ENST00000430825 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
LMBR1-206ENST00000430825 RSPH4AQ5TD94 716 aa27.16■■□□□ 1.94
LMBR1-206ENST00000430825 MED14O60244 1454 aa27.16■■□□□ 1.94
LMBR1-206ENST00000430825 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
LMBR1-206ENST00000430825 CEP162Q5TB80 1403 aa27.15■■□□□ 1.94
LMBR1-206ENST00000430825 CCDC141Q6ZP82 1450 aa27.14■■□□□ 1.94
LMBR1-206ENST00000430825 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
LMBR1-206ENST00000430825 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
LMBR1-206ENST00000430825 ALKQ9UM73 1620 aa27.08■■□□□ 1.93
LMBR1-206ENST00000430825 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
LMBR1-206ENST00000430825 CAMSAP2Q08AD1 1489 aa27.05■■□□□ 1.92
LMBR1-206ENST00000430825 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
LMBR1-206ENST00000430825 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
LMBR1-206ENST00000430825 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
LMBR1-206ENST00000430825 NCOA2Q15596 1464 aa27■■□□□ 1.91
LMBR1-206ENST00000430825 RNF17Q9BXT8 1623 aaKnown RBP26.99■■□□□ 1.91
LMBR1-206ENST00000430825 SYNMO15061 1565 aa26.99■■□□□ 1.91
LMBR1-206ENST00000430825 ARHGEF5Q12774 1597 aa26.98■■□□□ 1.91
LMBR1-206ENST00000430825 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.9
LMBR1-206ENST00000430825 SENP3Q9H4L4 574 aaPredicted RBP26.95■■□□□ 1.9
LMBR1-206ENST00000430825 ABCC3O15438 1527 aa26.95■■□□□ 1.9
LMBR1-206ENST00000430825 ZC3H13Q5T200 1668 aaKnown RBP26.94■■□□□ 1.9
LMBR1-206ENST00000430825 ERVK-7P63135 1459 aa26.93■■□□□ 1.9
LMBR1-206ENST00000430825 SCAF11Q99590 1463 aaKnown RBP26.88■■□□□ 1.89
LMBR1-206ENST00000430825 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
LMBR1-206ENST00000430825 MAST1Q9Y2H9 1570 aa26.85■■□□□ 1.89
LMBR1-206ENST00000430825 RGS17Q9UGC6 210 aaPredicted RBP26.85■■□□□ 1.89
LMBR1-206ENST00000430825 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
LMBR1-206ENST00000430825 TXNDC2Q86VQ3 553 aa26.83■■□□□ 1.89
LMBR1-206ENST00000430825 ARHGAP23Q9P227 1491 aa26.81■■□□□ 1.88
LMBR1-206ENST00000430825 LTKP29376 864 aa26.81■■□□□ 1.88
LMBR1-206ENST00000430825 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
LMBR1-206ENST00000430825 SLIT1O75093 1534 aa26.8■■□□□ 1.88
LMBR1-206ENST00000430825 MROH1Q8NDA8 1641 aa26.79■■□□□ 1.88
LMBR1-206ENST00000430825 FAM135BQ49AJ0 1406 aa26.79■■□□□ 1.88
LMBR1-206ENST00000430825 ARHGAP31Q2M1Z3 1444 aa26.76■■□□□ 1.87
LMBR1-206ENST00000430825 CFAP65Q6ZU64 1925 aaKnown RBP26.76■■□□□ 1.87
LMBR1-206ENST00000430825 CEP152O94986 1710 aa26.75■■□□□ 1.87
LMBR1-206ENST00000430825 DUOX2Q9NRD8 1548 aa26.74■■□□□ 1.87
LMBR1-206ENST00000430825 XIRP1Q702N8 1843 aaKnown RBP26.72■■□□□ 1.87
LMBR1-206ENST00000430825 LRRC9Q6ZRR7 1453 aa26.72■■□□□ 1.87
LMBR1-206ENST00000430825 TMEM2Q9UHN6 1383 aa26.7■■□□□ 1.86
LMBR1-206ENST00000430825 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
LMBR1-206ENST00000430825 STAG3Q9UJ98 1225 aa26.68■■□□□ 1.86
LMBR1-206ENST00000430825 PRDM15P57071 1507 aaPredicted RBP26.68■■□□□ 1.86
LMBR1-206ENST00000430825 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
LMBR1-206ENST00000430825 POTEAQ6S8J7 498 aa26.67■■□□□ 1.86
LMBR1-206ENST00000430825 KCNA6P17658 529 aa26.66■■□□□ 1.86
LMBR1-206ENST00000430825 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
LMBR1-206ENST00000430825 KIF15Q9NS87 1388 aa26.64■■□□□ 1.86
LMBR1-206ENST00000430825 PIK3C2BO00750 1634 aa26.63■■□□□ 1.85
LMBR1-206ENST00000430825 PROSER2Q86WR7 435 aaPredicted RBP26.62■■□□□ 1.85
LMBR1-206ENST00000430825 KANK1Q14678 1352 aa26.61■■□□□ 1.85
LMBR1-206ENST00000430825 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
LMBR1-206ENST00000430825 KDM5AP29375 1690 aaKnown RBP26.6■■□□□ 1.85
LMBR1-206ENST00000430825 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
LMBR1-206ENST00000430825 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
LMBR1-206ENST00000430825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.85
LMBR1-206ENST00000430825 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
LMBR1-206ENST00000430825 MAP3K1Q13233 1512 aa26.58■■□□□ 1.85
LMBR1-206ENST00000430825 KANK4Q5T7N3 995 aaPredicted RBP26.57■■□□□ 1.84
LMBR1-206ENST00000430825 IDI1Q13907 227 aa26.56■■□□□ 1.84
LMBR1-206ENST00000430825 SLC26A8Q96RN1 970 aa26.56■■□□□ 1.84
LMBR1-206ENST00000430825 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
LMBR1-206ENST00000430825 TET3O43151 1660 aa26.55■■□□□ 1.84
LMBR1-206ENST00000430825 MSH6P52701 1360 aa26.54■■□□□ 1.84
LMBR1-206ENST00000430825 ABCC5O15440 1437 aa26.53■■□□□ 1.84
LMBR1-206ENST00000430825 LMTK2Q8IWU2 1503 aa26.52■■□□□ 1.84
LMBR1-206ENST00000430825 RBM33Q96EV2 1170 aaKnown RBP26.51■■□□□ 1.83
LMBR1-206ENST00000430825 JCADQ9P266 1359 aa26.5■■□□□ 1.83
LMBR1-206ENST00000430825 SLAIN2Q9P270 581 aa26.5■■□□□ 1.83
LMBR1-206ENST00000430825 NWD1Q149M9 1564 aa26.5■■□□□ 1.83
LMBR1-206ENST00000430825 CROCC2H7BZ55 1655 aa26.49■■□□□ 1.83
LMBR1-206ENST00000430825 BCANQ96GW7 911 aa26.47■■□□□ 1.83
LMBR1-206ENST00000430825 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
LMBR1-206ENST00000430825 NOS1P29475 1434 aa26.46■■□□□ 1.83
LMBR1-206ENST00000430825 ADGRB3O60242 1522 aa26.45■■□□□ 1.83
LMBR1-206ENST00000430825 DAPK1P53355 1430 aa26.45■■□□□ 1.82
LMBR1-206ENST00000430825 PHLPP1O60346 1717 aa26.45■■□□□ 1.82
LMBR1-206ENST00000430825 ANKRD30AQ9BXX3 1397 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms