RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
RDH11-202ENST00000428130 TIAM1Q13009 1591 aa16.89■□□□□ 0.3
RDH11-202ENST00000428130 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.3
RDH11-202ENST00000428130 PIP4K2BP78356 416 aa16.89■□□□□ 0.29
RDH11-202ENST00000428130 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
RDH11-202ENST00000428130 TOM1O60784 492 aa16.88■□□□□ 0.29
RDH11-202ENST00000428130 MBD5Q9P267 1494 aa16.87■□□□□ 0.29
RDH11-202ENST00000428130 FAM135AQ9P2D6 1515 aa16.87■□□□□ 0.29
RDH11-202ENST00000428130 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
RDH11-202ENST00000428130 PZPP20742 1482 aa16.86■□□□□ 0.29
RDH11-202ENST00000428130 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
RDH11-202ENST00000428130 STRCP1A6NGW2 1772 aa16.86■□□□□ 0.29
RDH11-202ENST00000428130 TNRQ92752 1358 aa16.86■□□□□ 0.29
RDH11-202ENST00000428130 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
RDH11-202ENST00000428130 IQGAP1P46940 1657 aa16.85■□□□□ 0.29
RDH11-202ENST00000428130 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
RDH11-202ENST00000428130 MED14O60244 1454 aa16.83■□□□□ 0.28
RDH11-202ENST00000428130 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
RDH11-202ENST00000428130 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.28
RDH11-202ENST00000428130 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
RDH11-202ENST00000428130 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
RDH11-202ENST00000428130 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
RDH11-202ENST00000428130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
RDH11-202ENST00000428130 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
RDH11-202ENST00000428130 RNF17Q9BXT8 1623 aaKnown RBP16.8■□□□□ 0.28
RDH11-202ENST00000428130 SYNMO15061 1565 aa16.8■□□□□ 0.28
RDH11-202ENST00000428130 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
RDH11-202ENST00000428130 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
RDH11-202ENST00000428130 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
RDH11-202ENST00000428130 MIA2Q96PC5 1412 aa16.78■□□□□ 0.28
RDH11-202ENST00000428130 KIF3BO15066 747 aa16.77■□□□□ 0.28
RDH11-202ENST00000428130 CCDC141Q6ZP82 1450 aa16.77■□□□□ 0.28
RDH11-202ENST00000428130 LRRC7Q96NW7 1537 aa16.76■□□□□ 0.27
RDH11-202ENST00000428130 THEMISQ8N1K5 641 aaPredicted RBP16.76■□□□□ 0.27
RDH11-202ENST00000428130 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
RDH11-202ENST00000428130 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
RDH11-202ENST00000428130 CAMSAP2Q08AD1 1489 aa16.74■□□□□ 0.27
RDH11-202ENST00000428130 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
RDH11-202ENST00000428130 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
RDH11-202ENST00000428130 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
RDH11-202ENST00000428130 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
RDH11-202ENST00000428130 CEP152O94986 1710 aa16.7■□□□□ 0.26
RDH11-202ENST00000428130 ABCC3O15438 1527 aa16.7■□□□□ 0.26
RDH11-202ENST00000428130 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
RDH11-202ENST00000428130 EIF2AK4Q9P2K8 1649 aaKnown RBP16.68■□□□□ 0.26
RDH11-202ENST00000428130 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
RDH11-202ENST00000428130 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
RDH11-202ENST00000428130 RSPH4AQ5TD94 716 aa16.66■□□□□ 0.26
RDH11-202ENST00000428130 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
RDH11-202ENST00000428130 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
RDH11-202ENST00000428130 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
RDH11-202ENST00000428130 SLIT1O75093 1534 aa16.62■□□□□ 0.25
RDH11-202ENST00000428130 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
RDH11-202ENST00000428130 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
RDH11-202ENST00000428130 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
RDH11-202ENST00000428130 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
RDH11-202ENST00000428130 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
RDH11-202ENST00000428130 LTKP29376 864 aa16.57■□□□□ 0.24
RDH11-202ENST00000428130 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
RDH11-202ENST00000428130 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
RDH11-202ENST00000428130 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
RDH11-202ENST00000428130 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
RDH11-202ENST00000428130 POTEAQ6S8J7 498 aa16.53■□□□□ 0.24
RDH11-202ENST00000428130 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
RDH11-202ENST00000428130 DUOX2Q9NRD8 1548 aa16.53■□□□□ 0.24
RDH11-202ENST00000428130 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
RDH11-202ENST00000428130 MAP3K1Q13233 1512 aa16.52■□□□□ 0.24
RDH11-202ENST00000428130 CROCC2H7BZ55 1655 aa16.51■□□□□ 0.23
RDH11-202ENST00000428130 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
RDH11-202ENST00000428130 TET3O43151 1660 aa16.49■□□□□ 0.23
RDH11-202ENST00000428130 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
RDH11-202ENST00000428130 PHLPP1O60346 1717 aa16.48■□□□□ 0.23
RDH11-202ENST00000428130 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
RDH11-202ENST00000428130 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
RDH11-202ENST00000428130 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
RDH11-202ENST00000428130 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
RDH11-202ENST00000428130 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
RDH11-202ENST00000428130 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
RDH11-202ENST00000428130 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
RDH11-202ENST00000428130 KIF15Q9NS87 1388 aa16.43■□□□□ 0.22
RDH11-202ENST00000428130 KCNA6P17658 529 aa16.43■□□□□ 0.22
RDH11-202ENST00000428130 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
RDH11-202ENST00000428130 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
RDH11-202ENST00000428130 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
RDH11-202ENST00000428130 ADGRB3O60242 1522 aa16.41■□□□□ 0.22
RDH11-202ENST00000428130 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
RDH11-202ENST00000428130 PROSER2Q86WR7 435 aaPredicted RBP16.4■□□□□ 0.22
RDH11-202ENST00000428130 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
RDH11-202ENST00000428130 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
RDH11-202ENST00000428130 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
RDH11-202ENST00000428130 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
RDH11-202ENST00000428130 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
RDH11-202ENST00000428130 IDI1Q13907 227 aa16.38■□□□□ 0.21
RDH11-202ENST00000428130 JCADQ9P266 1359 aa16.38■□□□□ 0.21
RDH11-202ENST00000428130 ABCC5O15440 1437 aa16.37■□□□□ 0.21
RDH11-202ENST00000428130 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
RDH11-202ENST00000428130 MSH6P52701 1360 aa16.37■□□□□ 0.21
RDH11-202ENST00000428130 KANK1Q14678 1352 aa16.37■□□□□ 0.21
RDH11-202ENST00000428130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
RDH11-202ENST00000428130 NOS1P29475 1434 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms