RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 DCAF11Q8TEB1 546 aa16.31■□□□□ 0.2
LRTOMT-206ENST00000427369 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
LRTOMT-206ENST00000427369 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
LRTOMT-206ENST00000427369 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
LRTOMT-206ENST00000427369 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
LRTOMT-206ENST00000427369 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
LRTOMT-206ENST00000427369 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
LRTOMT-206ENST00000427369 E9PCH4 1651 aa16.28■□□□□ 0.2
LRTOMT-206ENST00000427369 C8orf34Q49A92 452 aa16.28■□□□□ 0.2
LRTOMT-206ENST00000427369 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.2
LRTOMT-206ENST00000427369 CENPQQ7L2Z9 268 aaPredicted RBP16.27■□□□□ 0.2
LRTOMT-206ENST00000427369 NUP155O75694 1391 aa16.26■□□□□ 0.19
LRTOMT-206ENST00000427369 RGS3P49796 1198 aa16.26■□□□□ 0.19
LRTOMT-206ENST00000427369 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
LRTOMT-206ENST00000427369 KIAA0586Q9BVV6 1533 aa16.25■□□□□ 0.19
LRTOMT-206ENST00000427369 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
LRTOMT-206ENST00000427369 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
LRTOMT-206ENST00000427369 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
LRTOMT-206ENST00000427369 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
LRTOMT-206ENST00000427369 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
LRTOMT-206ENST00000427369 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
LRTOMT-206ENST00000427369 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
LRTOMT-206ENST00000427369 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
LRTOMT-206ENST00000427369 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
LRTOMT-206ENST00000427369 ADGRL2O95490 1459 aa16.2■□□□□ 0.18
LRTOMT-206ENST00000427369 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
LRTOMT-206ENST00000427369 PANK3Q9H999 370 aa16.19■□□□□ 0.18
LRTOMT-206ENST00000427369 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
LRTOMT-206ENST00000427369 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
LRTOMT-206ENST00000427369 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
LRTOMT-206ENST00000427369 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
LRTOMT-206ENST00000427369 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
LRTOMT-206ENST00000427369 POGKQ9P215 609 aa16.16■□□□□ 0.18
LRTOMT-206ENST00000427369 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
LRTOMT-206ENST00000427369 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
LRTOMT-206ENST00000427369 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
LRTOMT-206ENST00000427369 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
LRTOMT-206ENST00000427369 INSRP06213 1382 aa16.15■□□□□ 0.18
LRTOMT-206ENST00000427369 DISP3Q9P2K9 1392 aa16.15■□□□□ 0.18
LRTOMT-206ENST00000427369 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.18
LRTOMT-206ENST00000427369 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
LRTOMT-206ENST00000427369 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
LRTOMT-206ENST00000427369 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
LRTOMT-206ENST00000427369 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
LRTOMT-206ENST00000427369 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
LRTOMT-206ENST00000427369 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
LRTOMT-206ENST00000427369 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
LRTOMT-206ENST00000427369 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
LRTOMT-206ENST00000427369 DISP1Q96F81 1524 aa16.12■□□□□ 0.17
LRTOMT-206ENST00000427369 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
LRTOMT-206ENST00000427369 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
LRTOMT-206ENST00000427369 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
LRTOMT-206ENST00000427369 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
LRTOMT-206ENST00000427369 TESK2Q96S53 571 aa16.11■□□□□ 0.17
LRTOMT-206ENST00000427369 SLKQ9H2G2 1235 aaPredicted RBP16.11■□□□□ 0.17
LRTOMT-206ENST00000427369 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
LRTOMT-206ENST00000427369 RRAGDQ9NQL2 400 aaPredicted RBP16.1■□□□□ 0.17
LRTOMT-206ENST00000427369 KDM5DQ9BY66 1539 aa16.1■□□□□ 0.17
LRTOMT-206ENST00000427369 TRPM1Q7Z4N2 1603 aa16.09■□□□□ 0.17
LRTOMT-206ENST00000427369 C9orf84Q5VXU9 1444 aa16.09■□□□□ 0.17
LRTOMT-206ENST00000427369 USP19O94966 1318 aa16.09■□□□□ 0.17
LRTOMT-206ENST00000427369 SEC24BO95487 1268 aa16.08■□□□□ 0.17
LRTOMT-206ENST00000427369 TSPY4P0CV99 314 aa16.08■□□□□ 0.17
LRTOMT-206ENST00000427369 TSPY10P0CW01 314 aa16.08■□□□□ 0.17
LRTOMT-206ENST00000427369 ARXQ96QS3 562 aa16.08■□□□□ 0.17
LRTOMT-206ENST00000427369 IGHDP01880 384 aa16.07■□□□□ 0.16
LRTOMT-206ENST00000427369 TMF1P82094 1093 aa16.07■□□□□ 0.16
LRTOMT-206ENST00000427369 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
LRTOMT-206ENST00000427369 ZNF521Q96K83 1311 aa16.06■□□□□ 0.16
LRTOMT-206ENST00000427369 BCAR3O75815 825 aa16.06■□□□□ 0.16
LRTOMT-206ENST00000427369 PPP2R1AP30153 589 aa16.06■□□□□ 0.16
LRTOMT-206ENST00000427369 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
LRTOMT-206ENST00000427369 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
LRTOMT-206ENST00000427369 BECN1Q14457 450 aa16.05■□□□□ 0.16
LRTOMT-206ENST00000427369 CCDC144AA2RUR9 1427 aa16.05■□□□□ 0.16
LRTOMT-206ENST00000427369 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
LRTOMT-206ENST00000427369 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
LRTOMT-206ENST00000427369 HNRNPMP52272 730 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRTOMT-206ENST00000427369 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
LRTOMT-206ENST00000427369 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
LRTOMT-206ENST00000427369 PTPRGP23470 1445 aa16.03■□□□□ 0.16
LRTOMT-206ENST00000427369 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
LRTOMT-206ENST00000427369 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
LRTOMT-206ENST00000427369 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.15
LRTOMT-206ENST00000427369 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
LRTOMT-206ENST00000427369 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
LRTOMT-206ENST00000427369 A2MP01023 1474 aa16■□□□□ 0.15
LRTOMT-206ENST00000427369 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
LRTOMT-206ENST00000427369 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
LRTOMT-206ENST00000427369 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
LRTOMT-206ENST00000427369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
LRTOMT-206ENST00000427369 APAF1O14727 1248 aa15.99■□□□□ 0.15
LRTOMT-206ENST00000427369 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
LRTOMT-206ENST00000427369 MAGI2Q86UL8 1455 aa15.98■□□□□ 0.15
LRTOMT-206ENST00000427369 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
LRTOMT-206ENST00000427369 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
LRTOMT-206ENST00000427369 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
LRTOMT-206ENST00000427369 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 MAPK8IP3Q9UPT6 1336 aa15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms