RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 LHX8Q68G74 356 aa10.69□□□□□ -0.7
DDX39B-207ENST00000427214 ABCC1P33527 1531 aa10.68□□□□□ -0.7
DDX39B-207ENST00000427214 ZNF518AQ6AHZ1 1483 aa10.68□□□□□ -0.7
DDX39B-207ENST00000427214 CDC42BPAQ5VT25 1732 aa10.68□□□□□ -0.7
DDX39B-207ENST00000427214 MADDQ8WXG6 1647 aa10.68□□□□□ -0.7
DDX39B-207ENST00000427214 KDM5CP41229 1560 aa10.68□□□□□ -0.7
DDX39B-207ENST00000427214 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
DDX39B-207ENST00000427214 MLECQ14165 292 aa10.67□□□□□ -0.7
DDX39B-207ENST00000427214 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
DDX39B-207ENST00000427214 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
DDX39B-207ENST00000427214 HECW2Q9P2P5 1572 aa10.67□□□□□ -0.7
DDX39B-207ENST00000427214 ATP10AO60312 1499 aa10.67□□□□□ -0.7
DDX39B-207ENST00000427214 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
DDX39B-207ENST00000427214 C9orf84Q5VXU9 1444 aa10.66□□□□□ -0.7
DDX39B-207ENST00000427214 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.7
DDX39B-207ENST00000427214 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
DDX39B-207ENST00000427214 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.71
DDX39B-207ENST00000427214 EHBP1L1Q8N3D4 1523 aa10.64□□□□□ -0.71
DDX39B-207ENST00000427214 ITSN2Q9NZM3 1697 aa10.64□□□□□ -0.71
DDX39B-207ENST00000427214 HNRNPMP52272 730 aaKnown RBP eCLIP10.64□□□□□ -0.71
DDX39B-207ENST00000427214 CFDP1Q9UEE9 299 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-207ENST00000427214 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
DDX39B-207ENST00000427214 VPS8Q8N3P4 1428 aa10.64□□□□□ -0.71
DDX39B-207ENST00000427214 DIP2CQ9Y2E4 1556 aa10.64□□□□□ -0.71
DDX39B-207ENST00000427214 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
DDX39B-207ENST00000427214 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
DDX39B-207ENST00000427214 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
DDX39B-207ENST00000427214 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
DDX39B-207ENST00000427214 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-207ENST00000427214 TIAM1Q13009 1591 aa10.62□□□□□ -0.71
DDX39B-207ENST00000427214 KIAA1107Q9UPP5 1409 aa10.61□□□□□ -0.71
DDX39B-207ENST00000427214 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
DDX39B-207ENST00000427214 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
DDX39B-207ENST00000427214 NCOA2Q15596 1464 aa10.6□□□□□ -0.71
DDX39B-207ENST00000427214 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
DDX39B-207ENST00000427214 SPAG9O60271 1321 aaKnown RBP10.59□□□□□ -0.71
DDX39B-207ENST00000427214 KANK4Q5T7N3 995 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-207ENST00000427214 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
DDX39B-207ENST00000427214 PLEKHH2Q8IVE3 1493 aa10.59□□□□□ -0.71
DDX39B-207ENST00000427214 FER1L4A9Z1Z3 1794 aa10.58□□□□□ -0.72
DDX39B-207ENST00000427214 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
DDX39B-207ENST00000427214 MBD5Q9P267 1494 aa10.58□□□□□ -0.72
DDX39B-207ENST00000427214 CEBPAP49715 358 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-207ENST00000427214 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-207ENST00000427214 AGLP35573 1532 aa10.58□□□□□ -0.72
DDX39B-207ENST00000427214 LRRC9Q6ZRR7 1453 aa10.57□□□□□ -0.72
DDX39B-207ENST00000427214 SUPT6HQ7KZ85 1726 aaKnown RBP10.56□□□□□ -0.72
DDX39B-207ENST00000427214 KIF12Q96FN5 646 aa10.56□□□□□ -0.72
DDX39B-207ENST00000427214 ATP7AQ04656 1500 aa10.56□□□□□ -0.72
DDX39B-207ENST00000427214 INO80Q9ULG1 1556 aaPredicted RBP10.56□□□□□ -0.72
DDX39B-207ENST00000427214 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
DDX39B-207ENST00000427214 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
DDX39B-207ENST00000427214 HSPA2P54652 639 aa10.54□□□□□ -0.72
DDX39B-207ENST00000427214 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
DDX39B-207ENST00000427214 NUBP1P53384 320 aa10.53□□□□□ -0.72
DDX39B-207ENST00000427214 A2MP01023 1474 aa10.53□□□□□ -0.72
DDX39B-207ENST00000427214 PLXNC1O60486 1568 aa10.52□□□□□ -0.72
DDX39B-207ENST00000427214 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
DDX39B-207ENST00000427214 CCDC141Q6ZP82 1450 aa10.51□□□□□ -0.73
DDX39B-207ENST00000427214 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-207ENST00000427214 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
DDX39B-207ENST00000427214 ATMINO43313 823 aaPredicted RBP10.5□□□□□ -0.73
DDX39B-207ENST00000427214 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
DDX39B-207ENST00000427214 MAP3K13O43283 966 aa10.49□□□□□ -0.73
DDX39B-207ENST00000427214 GGT6Q6P531 493 aa10.49□□□□□ -0.73
DDX39B-207ENST00000427214 C3P01024 1663 aa10.49□□□□□ -0.73
DDX39B-207ENST00000427214 MYOM3Q5VTT5 1437 aa10.49□□□□□ -0.73
DDX39B-207ENST00000427214 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
DDX39B-207ENST00000427214 DHX29Q7Z478 1369 aaKnown RBP10.48□□□□□ -0.73
DDX39B-207ENST00000427214 CNTLNQ9NXG0 1405 aa10.48□□□□□ -0.73
DDX39B-207ENST00000427214 ARHGEF5Q12774 1597 aa10.48□□□□□ -0.73
DDX39B-207ENST00000427214 ZMYM3Q14202 1370 aa10.47□□□□□ -0.73
DDX39B-207ENST00000427214 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
DDX39B-207ENST00000427214 ADGBQ8N7X0 1667 aa10.47□□□□□ -0.73
DDX39B-207ENST00000427214 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
DDX39B-207ENST00000427214 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
DDX39B-207ENST00000427214 UHRF1BP1Q6BDS2 1440 aa10.46□□□□□ -0.74
DDX39B-207ENST00000427214 KIF3BO15066 747 aa10.45□□□□□ -0.74
DDX39B-207ENST00000427214 TSPY4P0CV99 314 aa10.45□□□□□ -0.74
DDX39B-207ENST00000427214 TSPY10P0CW01 314 aa10.45□□□□□ -0.74
DDX39B-207ENST00000427214 SETD1BQ9UPS6 1966 aaKnown RBP10.45□□□□□ -0.74
DDX39B-207ENST00000427214 CLTCQ00610 1675 aaKnown RBP10.44□□□□□ -0.74
DDX39B-207ENST00000427214 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
DDX39B-207ENST00000427214 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
DDX39B-207ENST00000427214 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
DDX39B-207ENST00000427214 ATN1P54259 1190 aaPredicted RBP10.43□□□□□ -0.74
DDX39B-207ENST00000427214 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
DDX39B-207ENST00000427214 TRPC6Q9Y210 931 aa10.43□□□□□ -0.74
DDX39B-207ENST00000427214 MAST1Q9Y2H9 1570 aa10.43□□□□□ -0.74
DDX39B-207ENST00000427214 NPATQ14207 1427 aa10.42□□□□□ -0.74
DDX39B-207ENST00000427214 PTPRKQ15262 1439 aa10.42□□□□□ -0.74
DDX39B-207ENST00000427214 C7P10643 843 aa10.42□□□□□ -0.74
DDX39B-207ENST00000427214 ABCC5O15440 1437 aa10.41□□□□□ -0.74
DDX39B-207ENST00000427214 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
DDX39B-207ENST00000427214 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-207ENST00000427214 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
DDX39B-207ENST00000427214 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-207ENST00000427214 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
DDX39B-207ENST00000427214 PTPN23Q9H3S7 1636 aa10.4□□□□□ -0.74
DDX39B-207ENST00000427214 TIE1P35590 1138 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms