RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 PPP6R1Q9UPN7 881 aa24.49■■□□□ 1.51
AFF3-208ENST00000427118 NPATQ14207 1427 aa24.49■■□□□ 1.51
AFF3-208ENST00000427118 RNF17Q9BXT8 1623 aaKnown RBP24.49■■□□□ 1.51
AFF3-208ENST00000427118 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
AFF3-208ENST00000427118 KDM5DQ9BY66 1539 aa24.47■■□□□ 1.51
AFF3-208ENST00000427118 KIF15Q9NS87 1388 aa24.46■■□□□ 1.51
AFF3-208ENST00000427118 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
AFF3-208ENST00000427118 CHIC2Q9UKJ5 165 aa24.46■■□□□ 1.51
AFF3-208ENST00000427118 MROH1Q8NDA8 1641 aa24.46■■□□□ 1.51
AFF3-208ENST00000427118 EIF2AK4Q9P2K8 1649 aaKnown RBP24.46■■□□□ 1.51
AFF3-208ENST00000427118 DUOX2Q9NRD8 1548 aa24.45■■□□□ 1.51
AFF3-208ENST00000427118 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
AFF3-208ENST00000427118 MYO3AQ8NEV4 1616 aa24.44■■□□□ 1.5
AFF3-208ENST00000427118 WASHC2CQ9Y4E1 1318 aa24.42■■□□□ 1.5
AFF3-208ENST00000427118 FAM135AQ9P2D6 1515 aa24.41■■□□□ 1.5
AFF3-208ENST00000427118 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
AFF3-208ENST00000427118 CEP152O94986 1710 aa24.4■■□□□ 1.5
AFF3-208ENST00000427118 ABCC3O15438 1527 aa24.4■■□□□ 1.5
AFF3-208ENST00000427118 ZNF142P52746 1687 aaPredicted RBP24.39■■□□□ 1.49
AFF3-208ENST00000427118 PZPP20742 1482 aa24.38■■□□□ 1.49
AFF3-208ENST00000427118 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
AFF3-208ENST00000427118 CEP170BQ9Y4F5 1589 aaPredicted RBP24.36■■□□□ 1.49
AFF3-208ENST00000427118 NCOA1Q15788 1441 aa24.35■■□□□ 1.49
AFF3-208ENST00000427118 CAMSAP1Q5T5Y3 1602 aa24.35■■□□□ 1.49
AFF3-208ENST00000427118 ZC3H13Q5T200 1668 aaKnown RBP24.35■■□□□ 1.49
AFF3-208ENST00000427118 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
AFF3-208ENST00000427118 ADGRL2O95490 1459 aa24.34■■□□□ 1.49
AFF3-208ENST00000427118 CFAP65Q6ZU64 1925 aaKnown RBP24.34■■□□□ 1.49
AFF3-208ENST00000427118 TNRQ92752 1358 aa24.32■■□□□ 1.48
AFF3-208ENST00000427118 PRDM15P57071 1507 aaPredicted RBP24.32■■□□□ 1.48
AFF3-208ENST00000427118 ILDR1Q86SU0 546 aaPredicted RBP24.32■■□□□ 1.48
AFF3-208ENST00000427118 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
AFF3-208ENST00000427118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.48
AFF3-208ENST00000427118 A2ML1A8K2U0 1454 aa24.29■■□□□ 1.48
AFF3-208ENST00000427118 NCKAP5LQ9HCH0 1330 aa24.27■■□□□ 1.48
AFF3-208ENST00000427118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.47
AFF3-208ENST00000427118 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
AFF3-208ENST00000427118 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
AFF3-208ENST00000427118 PTPRTO14522 1441 aa24.24■■□□□ 1.47
AFF3-208ENST00000427118 VWDEQ8N2E2 1590 aa24.22■■□□□ 1.47
AFF3-208ENST00000427118 RRBP1Q9P2E9 1410 aaKnown RBP24.22■■□□□ 1.47
AFF3-208ENST00000427118 ITGAEP38570 1179 aa24.22■■□□□ 1.47
AFF3-208ENST00000427118 PLA2R1Q13018 1463 aa24.21■■□□□ 1.47
AFF3-208ENST00000427118 ANKRD50Q9ULJ7 1429 aa24.21■■□□□ 1.47
AFF3-208ENST00000427118 DMRT2Q9Y5R5 561 aa24.21■■□□□ 1.47
AFF3-208ENST00000427118 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
AFF3-208ENST00000427118 KANK1Q14678 1352 aa24.17■■□□□ 1.46
AFF3-208ENST00000427118 ARHGAP31Q2M1Z3 1444 aa24.17■■□□□ 1.46
AFF3-208ENST00000427118 LMTK2Q8IWU2 1503 aa24.16■■□□□ 1.46
AFF3-208ENST00000427118 UGGT1Q9NYU2 1555 aa24.16■■□□□ 1.46
AFF3-208ENST00000427118 ROCK1Q13464 1354 aa24.16■■□□□ 1.46
AFF3-208ENST00000427118 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
AFF3-208ENST00000427118 CERKQ8TCT0 537 aa24.14■■□□□ 1.45
AFF3-208ENST00000427118 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
AFF3-208ENST00000427118 PKD2Q13563 968 aa24.13■■□□□ 1.45
AFF3-208ENST00000427118 FBXO41Q8TF61 875 aa24.12■■□□□ 1.45
AFF3-208ENST00000427118 EFCAB6Q5THR3 1501 aa24.11■■□□□ 1.45
AFF3-208ENST00000427118 UNC13BO14795 1591 aa24.11■■□□□ 1.45
AFF3-208ENST00000427118 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
AFF3-208ENST00000427118 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
AFF3-208ENST00000427118 HRCP23327 699 aa24.08■■□□□ 1.45
AFF3-208ENST00000427118 THEMISQ8N1K5 641 aaPredicted RBP24.08■■□□□ 1.45
AFF3-208ENST00000427118 SYNMO15061 1565 aa24.08■■□□□ 1.44
AFF3-208ENST00000427118 ZNF335Q9H4Z2 1342 aaPredicted RBP24.07■■□□□ 1.44
AFF3-208ENST00000427118 PIK3C2BO00750 1634 aa24.06■■□□□ 1.44
AFF3-208ENST00000427118 TET3O43151 1660 aa24.05■■□□□ 1.44
AFF3-208ENST00000427118 NOS1P29475 1434 aa24.03■■□□□ 1.44
AFF3-208ENST00000427118 ANKLE2Q86XL3 938 aa24.03■■□□□ 1.44
AFF3-208ENST00000427118 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
AFF3-208ENST00000427118 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
AFF3-208ENST00000427118 E9PCH4 1651 aa24■■□□□ 1.43
AFF3-208ENST00000427118 IDI1Q13907 227 aa23.99■■□□□ 1.43
AFF3-208ENST00000427118 NPHP4O75161 1426 aaPredicted RBP23.98■■□□□ 1.43
AFF3-208ENST00000427118 MED14O60244 1454 aa23.98■■□□□ 1.43
AFF3-208ENST00000427118 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
AFF3-208ENST00000427118 RPRD2Q5VT52 1461 aaKnown RBP23.97■■□□□ 1.43
AFF3-208ENST00000427118 ARHGAP23Q9P227 1491 aa23.96■■□□□ 1.43
AFF3-208ENST00000427118 NUP155O75694 1391 aa23.96■■□□□ 1.43
AFF3-208ENST00000427118 SLIT1O75093 1534 aa23.95■■□□□ 1.43
AFF3-208ENST00000427118 NAIPQ13075 1403 aa23.95■■□□□ 1.42
AFF3-208ENST00000427118 LTKP29376 864 aa23.95■■□□□ 1.42
AFF3-208ENST00000427118 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
AFF3-208ENST00000427118 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
AFF3-208ENST00000427118 MYO5BQ9ULV0 1848 aa23.94■■□□□ 1.42
AFF3-208ENST00000427118 ADGRB3O60242 1522 aa23.93■■□□□ 1.42
AFF3-208ENST00000427118 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
AFF3-208ENST00000427118 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
AFF3-208ENST00000427118 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
AFF3-208ENST00000427118 TXNDC2Q86VQ3 553 aa23.9■■□□□ 1.42
AFF3-208ENST00000427118 STRCP1A6NGW2 1772 aa23.89■■□□□ 1.42
AFF3-208ENST00000427118 SLC52A1Q9NWF4 448 aa23.87■■□□□ 1.41
AFF3-208ENST00000427118 IQSEC2Q5JU85 1478 aa23.87■■□□□ 1.41
AFF3-208ENST00000427118 HFM1A2PYH4 1435 aa23.85■■□□□ 1.41
AFF3-208ENST00000427118 TMEM131LA2VDJ0 1609 aa23.85■■□□□ 1.41
AFF3-208ENST00000427118 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
AFF3-208ENST00000427118 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
AFF3-208ENST00000427118 CPS1P31327 1500 aa23.81■■□□□ 1.4
AFF3-208ENST00000427118 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
AFF3-208ENST00000427118 CHGAP10645 457 aaKnown RBP23.79■■□□□ 1.4
AFF3-208ENST00000427118 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms