RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
POLR1A-204ENST00000424089 SYCP2Q9BX26 1530 aa14.74□□□□□ -0.05
POLR1A-204ENST00000424089 NCOA2Q15596 1464 aa14.74□□□□□ -0.05
POLR1A-204ENST00000424089 MED1Q15648 1581 aaPredicted RBP14.73□□□□□ -0.05
POLR1A-204ENST00000424089 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
POLR1A-204ENST00000424089 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
POLR1A-204ENST00000424089 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.05
POLR1A-204ENST00000424089 A2MP01023 1474 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 MIA2Q96PC5 1412 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 TOM1O60784 492 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 ITGAEP38570 1179 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 RAB3GAP2Q9H2M9 1393 aa14.7□□□□□ -0.06
POLR1A-204ENST00000424089 TCOF1Q13428 1488 aaKnown RBP14.69□□□□□ -0.06
POLR1A-204ENST00000424089 PLXNC1O60486 1568 aa14.69□□□□□ -0.06
POLR1A-204ENST00000424089 INO80Q9ULG1 1556 aaPredicted RBP14.69□□□□□ -0.06
POLR1A-204ENST00000424089 ADGBQ8N7X0 1667 aa14.68□□□□□ -0.06
POLR1A-204ENST00000424089 PTPRKQ15262 1439 aa14.68□□□□□ -0.06
POLR1A-204ENST00000424089 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.06
POLR1A-204ENST00000424089 GGT6Q6P531 493 aa14.68□□□□□ -0.06
POLR1A-204ENST00000424089 ACIN1Q9UKV3 1341 aaKnown RBP14.67□□□□□ -0.06
POLR1A-204ENST00000424089 KIAA1107Q9UPP5 1409 aa14.67□□□□□ -0.06
POLR1A-204ENST00000424089 GPATCH8Q9UKJ3 1502 aaKnown RBP14.67□□□□□ -0.06
POLR1A-204ENST00000424089 CFDP1Q9UEE9 299 aaPredicted RBP14.66□□□□□ -0.06
POLR1A-204ENST00000424089 POLR1AO95602 1720 aaPredicted RBP14.66□□□□□ -0.06
POLR1A-204ENST00000424089 A2ML1A8K2U0 1454 aa14.64□□□□□ -0.07
POLR1A-204ENST00000424089 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
POLR1A-204ENST00000424089 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
POLR1A-204ENST00000424089 CPS1P31327 1500 aa14.63□□□□□ -0.07
POLR1A-204ENST00000424089 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
POLR1A-204ENST00000424089 HFM1A2PYH4 1435 aa14.62□□□□□ -0.07
POLR1A-204ENST00000424089 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
POLR1A-204ENST00000424089 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
POLR1A-204ENST00000424089 SHANK2Q9UPX8 1470 aa14.58□□□□□ -0.08
POLR1A-204ENST00000424089 TNRQ92752 1358 aa14.58□□□□□ -0.08
POLR1A-204ENST00000424089 FAM135AQ9P2D6 1515 aa14.57□□□□□ -0.08
POLR1A-204ENST00000424089 RTEL1-TNFRSF6BF6WH68 1400 aa14.57□□□□□ -0.08
POLR1A-204ENST00000424089 NEURL4Q96JN8 1562 aa14.56□□□□□ -0.08
POLR1A-204ENST00000424089 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
POLR1A-204ENST00000424089 ANKLE2Q86XL3 938 aa14.55□□□□□ -0.08
POLR1A-204ENST00000424089 DHX29Q7Z478 1369 aaKnown RBP14.55□□□□□ -0.08
POLR1A-204ENST00000424089 PZPP20742 1482 aa14.55□□□□□ -0.08
POLR1A-204ENST00000424089 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
POLR1A-204ENST00000424089 NAIPQ13075 1403 aa14.54□□□□□ -0.08
POLR1A-204ENST00000424089 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
POLR1A-204ENST00000424089 KIF3BO15066 747 aa14.53□□□□□ -0.08
POLR1A-204ENST00000424089 THEMISQ8N1K5 641 aaPredicted RBP14.53□□□□□ -0.08
POLR1A-204ENST00000424089 NLRP1Q9C000 1473 aa14.52□□□□□ -0.08
POLR1A-204ENST00000424089 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
POLR1A-204ENST00000424089 DEPDC5O75140 1603 aa14.52□□□□□ -0.09
POLR1A-204ENST00000424089 UGGT1Q9NYU2 1555 aa14.51□□□□□ -0.09
POLR1A-204ENST00000424089 MBD5Q9P267 1494 aa14.51□□□□□ -0.09
POLR1A-204ENST00000424089 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
POLR1A-204ENST00000424089 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
POLR1A-204ENST00000424089 NPHP4O75161 1426 aaPredicted RBP14.5□□□□□ -0.09
POLR1A-204ENST00000424089 ZNF644Q9H582 1327 aaPredicted RBP14.5□□□□□ -0.09
POLR1A-204ENST00000424089 IQGAP1P46940 1657 aa14.5□□□□□ -0.09
POLR1A-204ENST00000424089 CCDC141Q6ZP82 1450 aa14.5□□□□□ -0.09
POLR1A-204ENST00000424089 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
POLR1A-204ENST00000424089 MED14O60244 1454 aa14.49□□□□□ -0.09
POLR1A-204ENST00000424089 SYNMO15061 1565 aa14.47□□□□□ -0.09
POLR1A-204ENST00000424089 RGS17Q9UGC6 210 aaPredicted RBP14.47□□□□□ -0.09
POLR1A-204ENST00000424089 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
POLR1A-204ENST00000424089 DAPK1P53355 1430 aa14.47□□□□□ -0.09
POLR1A-204ENST00000424089 ZC3H13Q5T200 1668 aaKnown RBP14.45□□□□□ -0.1
POLR1A-204ENST00000424089 CAMSAP2Q08AD1 1489 aa14.44□□□□□ -0.1
POLR1A-204ENST00000424089 ABCC5O15440 1437 aa14.44□□□□□ -0.1
POLR1A-204ENST00000424089 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
POLR1A-204ENST00000424089 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
POLR1A-204ENST00000424089 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
POLR1A-204ENST00000424089 ALKQ9UM73 1620 aa14.43□□□□□ -0.1
POLR1A-204ENST00000424089 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
POLR1A-204ENST00000424089 STRCP1A6NGW2 1772 aa14.42□□□□□ -0.1
POLR1A-204ENST00000424089 RRP7BPQ9NSQ0 103 aa14.41□□□□□ -0.1
POLR1A-204ENST00000424089 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
POLR1A-204ENST00000424089 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
POLR1A-204ENST00000424089 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
POLR1A-204ENST00000424089 CFAP65Q6ZU64 1925 aaKnown RBP14.39□□□□□ -0.11
POLR1A-204ENST00000424089 ADGRL2O95490 1459 aa14.38□□□□□ -0.11
POLR1A-204ENST00000424089 EIF2AK4Q9P2K8 1649 aaKnown RBP14.38□□□□□ -0.11
POLR1A-204ENST00000424089 ABCC3O15438 1527 aa14.38□□□□□ -0.11
POLR1A-204ENST00000424089 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
POLR1A-204ENST00000424089 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
POLR1A-204ENST00000424089 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
POLR1A-204ENST00000424089 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
POLR1A-204ENST00000424089 ANKRD30AQ9BXX3 1397 aa14.36□□□□□ -0.11
POLR1A-204ENST00000424089 NEUROD1Q13562 356 aa14.36□□□□□ -0.11
POLR1A-204ENST00000424089 SCAF11Q99590 1463 aaKnown RBP14.36□□□□□ -0.11
POLR1A-204ENST00000424089 CEP152O94986 1710 aa14.35□□□□□ -0.11
POLR1A-204ENST00000424089 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
POLR1A-204ENST00000424089 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
POLR1A-204ENST00000424089 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
POLR1A-204ENST00000424089 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
POLR1A-204ENST00000424089 EID1Q9Y6B2 187 aa14.33□□□□□ -0.12
POLR1A-204ENST00000424089 XIRP1Q702N8 1843 aaKnown RBP14.31□□□□□ -0.12
POLR1A-204ENST00000424089 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
POLR1A-204ENST00000424089 SLIT1O75093 1534 aa14.31□□□□□ -0.12
POLR1A-204ENST00000424089 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
POLR1A-204ENST00000424089 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
POLR1A-204ENST00000424089 DUOX2Q9NRD8 1548 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms