RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
ABCA1-203ENST00000423487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.362e-8■■□□□ 12.7
ABCA1-203ENST00000423487 KANK1Q14678 1352 aa23.53■■□□□ 1.36
ABCA1-203ENST00000423487 KDM5DQ9BY66 1539 aa23.53■■□□□ 1.36
ABCA1-203ENST00000423487 DEPDC5O75140 1603 aa23.52■■□□□ 1.36
ABCA1-203ENST00000423487 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
ABCA1-203ENST00000423487 GGT6Q6P531 493 aa23.52■■□□□ 1.36
ABCA1-203ENST00000423487 RNF17Q9BXT8 1623 aaKnown RBP23.52■■□□□ 1.36
ABCA1-203ENST00000423487 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
ABCA1-203ENST00000423487 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
ABCA1-203ENST00000423487 ARID4BQ4LE39 1312 aaPredicted RBP23.5■■□□□ 1.35
ABCA1-203ENST00000423487 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
ABCA1-203ENST00000423487 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
ABCA1-203ENST00000423487 PZPP20742 1482 aa23.48■■□□□ 1.35
ABCA1-203ENST00000423487 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
ABCA1-203ENST00000423487 FAM135AQ9P2D6 1515 aa23.47■■□□□ 1.35
ABCA1-203ENST00000423487 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
ABCA1-203ENST00000423487 IQGAP3Q86VI3 1631 aa23.46■■□□□ 1.35
ABCA1-203ENST00000423487 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
ABCA1-203ENST00000423487 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
ABCA1-203ENST00000423487 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
ABCA1-203ENST00000423487 MLECQ14165 292 aa23.43■■□□□ 1.34
ABCA1-203ENST00000423487 PKD2Q13563 968 aa23.41■■□□□ 1.34
ABCA1-203ENST00000423487 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
ABCA1-203ENST00000423487 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.33
ABCA1-203ENST00000423487 ABCC3O15438 1527 aa23.37■■□□□ 1.33
ABCA1-203ENST00000423487 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
ABCA1-203ENST00000423487 TET3O43151 1660 aa23.36■■□□□ 1.33
ABCA1-203ENST00000423487 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
ABCA1-203ENST00000423487 FOXD1Q16676 465 aa23.33■■□□□ 1.33
ABCA1-203ENST00000423487 CEP152O94986 1710 aa23.33■■□□□ 1.32
ABCA1-203ENST00000423487 EFCAB6Q5THR3 1501 aa23.32■■□□□ 1.32
ABCA1-203ENST00000423487 CNTLNQ9NXG0 1405 aa23.3■■□□□ 1.32
ABCA1-203ENST00000423487 ARHGAP31Q2M1Z3 1444 aa23.29■■□□□ 1.32
ABCA1-203ENST00000423487 CAMSAP1Q5T5Y3 1602 aa23.29■■□□□ 1.32
ABCA1-203ENST00000423487 RPRD2Q5VT52 1461 aaKnown RBP23.29■■□□□ 1.32
ABCA1-203ENST00000423487 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
ABCA1-203ENST00000423487 NPATQ14207 1427 aa23.27■■□□□ 1.32
ABCA1-203ENST00000423487 E9PCH4 1651 aa23.27■■□□□ 1.32
ABCA1-203ENST00000423487 CLTCQ00610 1675 aaKnown RBP23.25■■□□□ 1.31
ABCA1-203ENST00000423487 ZMYM3Q14202 1370 aa23.23■■□□□ 1.31
ABCA1-203ENST00000423487 PTPRTO14522 1441 aa23.22■■□□□ 1.31
ABCA1-203ENST00000423487 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 FER1L4A9Z1Z3 1794 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 MROH2AA6NES4 1674 aa23.19■■□□□ 1.3
ABCA1-203ENST00000423487 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 NOS1P29475 1434 aa23.17■■□□□ 1.3
ABCA1-203ENST00000423487 TRPM2O94759 1503 aa23.17■■□□□ 1.3
ABCA1-203ENST00000423487 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
ABCA1-203ENST00000423487 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
ABCA1-203ENST00000423487 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.3
ABCA1-203ENST00000423487 ERVK-7P63135 1459 aa23.14■■□□□ 1.3
ABCA1-203ENST00000423487 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
ABCA1-203ENST00000423487 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
ABCA1-203ENST00000423487 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
ABCA1-203ENST00000423487 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
ABCA1-203ENST00000423487 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
ABCA1-203ENST00000423487 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
ABCA1-203ENST00000423487 TIMELESSQ9UNS1 1208 aa23.09■■□□□ 1.29
ABCA1-203ENST00000423487 CFAP65Q6ZU64 1925 aaKnown RBP23.09■■□□□ 1.29
ABCA1-203ENST00000423487 SYNMO15061 1565 aa23.08■■□□□ 1.29
ABCA1-203ENST00000423487 C3P01024 1663 aa23.08■■□□□ 1.28
ABCA1-203ENST00000423487 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
ABCA1-203ENST00000423487 CLTCL1P53675 1640 aa23.06■■□□□ 1.28
ABCA1-203ENST00000423487 TNRQ92752 1358 aa23.06■■□□□ 1.28
ABCA1-203ENST00000423487 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
ABCA1-203ENST00000423487 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
ABCA1-203ENST00000423487 IDI1Q13907 227 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 PIK3C2BO00750 1634 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 PTPRMP28827 1452 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 SPATA31E1Q6ZUB1 1445 aa23■■□□□ 1.27
ABCA1-203ENST00000423487 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
ABCA1-203ENST00000423487 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 L3MBTL2Q969R5 705 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
ABCA1-203ENST00000423487 KIF1BO60333 1816 aa22.96■■□□□ 1.27
ABCA1-203ENST00000423487 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
ABCA1-203ENST00000423487 ADGRB3O60242 1522 aa22.95■■□□□ 1.26
ABCA1-203ENST00000423487 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
ABCA1-203ENST00000423487 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
ABCA1-203ENST00000423487 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
ABCA1-203ENST00000423487 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
ABCA1-203ENST00000423487 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
ABCA1-203ENST00000423487 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
ABCA1-203ENST00000423487 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
ABCA1-203ENST00000423487 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
ABCA1-203ENST00000423487 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
ABCA1-203ENST00000423487 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
ABCA1-203ENST00000423487 KDM5AP29375 1690 aaKnown RBP22.86■■□□□ 1.25
ABCA1-203ENST00000423487 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
ABCA1-203ENST00000423487 THEMISQ8N1K5 641 aaPredicted RBP22.83■■□□□ 1.25
ABCA1-203ENST00000423487 CEP170BQ9Y4F5 1589 aaPredicted RBP22.83■■□□□ 1.25
ABCA1-203ENST00000423487 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
ABCA1-203ENST00000423487 MYOM2P54296 1465 aa22.81■■□□□ 1.24
ABCA1-203ENST00000423487 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms