RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
PTPN18-204ENST00000420717 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
PTPN18-204ENST00000420717 C3P01024 1663 aa22.13■■□□□ 1.13
PTPN18-204ENST00000420717 CLTCQ00610 1675 aaKnown RBP22.11■■□□□ 1.13
PTPN18-204ENST00000420717 MLECQ14165 292 aa22.1■■□□□ 1.13
PTPN18-204ENST00000420717 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-204ENST00000420717 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
PTPN18-204ENST00000420717 KIF3BO15066 747 aa22.06■■□□□ 1.12
PTPN18-204ENST00000420717 ABCC3O15438 1527 aa22.06■■□□□ 1.12
PTPN18-204ENST00000420717 GCC2Q8IWJ2 1684 aa22.05■■□□□ 1.12
PTPN18-204ENST00000420717 ANKRD50Q9ULJ7 1429 aa22.05■■□□□ 1.12
PTPN18-204ENST00000420717 UNC13BO14795 1591 aa22.04■■□□□ 1.12
PTPN18-204ENST00000420717 RRP7BPQ9NSQ0 103 aa22.04■■□□□ 1.12
PTPN18-204ENST00000420717 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
PTPN18-204ENST00000420717 NPATQ14207 1427 aa22.03■■□□□ 1.12
PTPN18-204ENST00000420717 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
PTPN18-204ENST00000420717 PREX1Q8TCU6 1659 aa22.02■■□□□ 1.12
PTPN18-204ENST00000420717 GGT6Q6P531 493 aa22.01■■□□□ 1.11
PTPN18-204ENST00000420717 CEP152O94986 1710 aa22■■□□□ 1.11
PTPN18-204ENST00000420717 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
PTPN18-204ENST00000420717 PZPP20742 1482 aa22■■□□□ 1.11
PTPN18-204ENST00000420717 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
PTPN18-204ENST00000420717 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
PTPN18-204ENST00000420717 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
PTPN18-204ENST00000420717 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
PTPN18-204ENST00000420717 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
PTPN18-204ENST00000420717 NAIPQ13075 1403 aa21.96■■□□□ 1.11
PTPN18-204ENST00000420717 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
PTPN18-204ENST00000420717 IQGAP3Q86VI3 1631 aa21.94■■□□□ 1.1
PTPN18-204ENST00000420717 ZNF142P52746 1687 aaPredicted RBP21.94■■□□□ 1.1
PTPN18-204ENST00000420717 EFCAB6Q5THR3 1501 aa21.93■■□□□ 1.1
PTPN18-204ENST00000420717 MYO3AQ8NEV4 1616 aa21.92■■□□□ 1.1
PTPN18-204ENST00000420717 SPATA31D1Q6ZQQ2 1576 aa21.92■■□□□ 1.1
PTPN18-204ENST00000420717 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
PTPN18-204ENST00000420717 TET3O43151 1660 aa21.91■■□□□ 1.1
PTPN18-204ENST00000420717 KANK1Q14678 1352 aa21.9■■□□□ 1.1
PTPN18-204ENST00000420717 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
PTPN18-204ENST00000420717 ITGAEP38570 1179 aa21.89■■□□□ 1.09
PTPN18-204ENST00000420717 UHRF1BP1Q6BDS2 1440 aa21.88■■□□□ 1.09
PTPN18-204ENST00000420717 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
PTPN18-204ENST00000420717 RPRD2Q5VT52 1461 aaKnown RBP21.86■■□□□ 1.09
PTPN18-204ENST00000420717 CEP170BQ9Y4F5 1589 aaPredicted RBP21.84■■□□□ 1.09
PTPN18-204ENST00000420717 NLRP1Q9C000 1473 aa21.82■■□□□ 1.08
PTPN18-204ENST00000420717 TNRQ92752 1358 aa21.81■■□□□ 1.08
PTPN18-204ENST00000420717 A2ML1A8K2U0 1454 aa21.8■■□□□ 1.08
PTPN18-204ENST00000420717 E9PCH4 1651 aa21.79■■□□□ 1.08
PTPN18-204ENST00000420717 NOS1P29475 1434 aa21.79■■□□□ 1.08
PTPN18-204ENST00000420717 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
PTPN18-204ENST00000420717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.08
PTPN18-204ENST00000420717 SYNMO15061 1565 aa21.77■■□□□ 1.08
PTPN18-204ENST00000420717 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
PTPN18-204ENST00000420717 FBXO31Q5XUX0 539 aaPredicted RBP21.75■■□□□ 1.07
PTPN18-204ENST00000420717 NUP155O75694 1391 aa21.74■■□□□ 1.07
PTPN18-204ENST00000420717 PLA2R1Q13018 1463 aa21.74■■□□□ 1.07
PTPN18-204ENST00000420717 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
PTPN18-204ENST00000420717 ACIN1Q9UKV3 1341 aaKnown RBP21.72■■□□□ 1.07
PTPN18-204ENST00000420717 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
PTPN18-204ENST00000420717 STRCQ7RTU9 1775 aa21.71■■□□□ 1.07
PTPN18-204ENST00000420717 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
PTPN18-204ENST00000420717 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.07
PTPN18-204ENST00000420717 UGGT1Q9NYU2 1555 aa21.69■■□□□ 1.06
PTPN18-204ENST00000420717 SPHKAPQ2M3C7 1700 aa21.69■■□□□ 1.06
PTPN18-204ENST00000420717 PTPRTO14522 1441 aa21.66■■□□□ 1.06
PTPN18-204ENST00000420717 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
PTPN18-204ENST00000420717 POLR1AO95602 1720 aaPredicted RBP21.65■■□□□ 1.06
PTPN18-204ENST00000420717 HSPA2P54652 639 aa21.64■■□□□ 1.05
PTPN18-204ENST00000420717 TRPM2O94759 1503 aa21.64■■□□□ 1.05
PTPN18-204ENST00000420717 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
PTPN18-204ENST00000420717 SLIT1O75093 1534 aa21.62■■□□□ 1.05
PTPN18-204ENST00000420717 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
PTPN18-204ENST00000420717 HRCP23327 699 aa21.61■■□□□ 1.05
PTPN18-204ENST00000420717 SLC52A1Q9NWF4 448 aa21.61■■□□□ 1.05
PTPN18-204ENST00000420717 NEURL4Q96JN8 1562 aa21.6■■□□□ 1.05
PTPN18-204ENST00000420717 TMEM131LA2VDJ0 1609 aa21.59■■□□□ 1.05
PTPN18-204ENST00000420717 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
PTPN18-204ENST00000420717 MED14O60244 1454 aa21.56■■□□□ 1.04
PTPN18-204ENST00000420717 CLTCL1P53675 1640 aa21.55■■□□□ 1.04
PTPN18-204ENST00000420717 PKD2Q13563 968 aa21.54■■□□□ 1.04
PTPN18-204ENST00000420717 IDI1Q13907 227 aa21.54■■□□□ 1.04
PTPN18-204ENST00000420717 MYO5BQ9ULV0 1848 aa21.53■■□□□ 1.04
PTPN18-204ENST00000420717 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
PTPN18-204ENST00000420717 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
PTPN18-204ENST00000420717 TMEM2Q9UHN6 1383 aa21.5■■□□□ 1.03
PTPN18-204ENST00000420717 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
PTPN18-204ENST00000420717 SCAF11Q99590 1463 aaKnown RBP21.5■■□□□ 1.03
PTPN18-204ENST00000420717 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
PTPN18-204ENST00000420717 IQGAP1P46940 1657 aa21.49■■□□□ 1.03
PTPN18-204ENST00000420717 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
PTPN18-204ENST00000420717 KIF1BO60333 1816 aa21.48■■□□□ 1.03
PTPN18-204ENST00000420717 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
PTPN18-204ENST00000420717 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
PTPN18-204ENST00000420717 NPHP4O75161 1426 aaPredicted RBP21.44■■□□□ 1.02
PTPN18-204ENST00000420717 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
PTPN18-204ENST00000420717 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.02
PTPN18-204ENST00000420717 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.02
PTPN18-204ENST00000420717 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
PTPN18-204ENST00000420717 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.01
PTPN18-204ENST00000420717 LTBP4Q8N2S1 1624 aa21.38■■□□□ 1.01
PTPN18-204ENST00000420717 LTKP29376 864 aa21.38■■□□□ 1.01
PTPN18-204ENST00000420717 SPATA31E1Q6ZUB1 1445 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms