RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 GGT6Q6P531 493 aa18.52■□□□□ 0.56
TMEM53-206ENST00000420706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
TMEM53-206ENST00000420706 NUP155O75694 1391 aa18.51■□□□□ 0.55
TMEM53-206ENST00000420706 UNC13BO14795 1591 aa18.5■□□□□ 0.55
TMEM53-206ENST00000420706 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-206ENST00000420706 DEPDC5O75140 1603 aa18.49■□□□□ 0.55
TMEM53-206ENST00000420706 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
TMEM53-206ENST00000420706 MLECQ14165 292 aa18.47■□□□□ 0.55
TMEM53-206ENST00000420706 MROH1Q8NDA8 1641 aa18.47■□□□□ 0.55
TMEM53-206ENST00000420706 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
TMEM53-206ENST00000420706 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
TMEM53-206ENST00000420706 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
TMEM53-206ENST00000420706 KANK1Q14678 1352 aa18.45■□□□□ 0.54
TMEM53-206ENST00000420706 PZPP20742 1482 aa18.45■□□□□ 0.54
TMEM53-206ENST00000420706 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-206ENST00000420706 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
TMEM53-206ENST00000420706 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
TMEM53-206ENST00000420706 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
TMEM53-206ENST00000420706 IQGAP3Q86VI3 1631 aa18.43■□□□□ 0.54
TMEM53-206ENST00000420706 FAM135AQ9P2D6 1515 aa18.43■□□□□ 0.54
TMEM53-206ENST00000420706 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
TMEM53-206ENST00000420706 PKD2Q13563 968 aa18.39■□□□□ 0.53
TMEM53-206ENST00000420706 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
TMEM53-206ENST00000420706 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
TMEM53-206ENST00000420706 ABCC3O15438 1527 aa18.38■□□□□ 0.53
TMEM53-206ENST00000420706 CEP152O94986 1710 aa18.37■□□□□ 0.53
TMEM53-206ENST00000420706 TET3O43151 1660 aa18.35■□□□□ 0.53
TMEM53-206ENST00000420706 FOXD1Q16676 465 aa18.35■□□□□ 0.53
TMEM53-206ENST00000420706 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-206ENST00000420706 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
TMEM53-206ENST00000420706 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
TMEM53-206ENST00000420706 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.52
TMEM53-206ENST00000420706 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
TMEM53-206ENST00000420706 E9PCH4 1651 aa18.31■□□□□ 0.52
TMEM53-206ENST00000420706 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
TMEM53-206ENST00000420706 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
TMEM53-206ENST00000420706 ARHGAP31Q2M1Z3 1444 aa18.31■□□□□ 0.52
TMEM53-206ENST00000420706 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
TMEM53-206ENST00000420706 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
TMEM53-206ENST00000420706 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
TMEM53-206ENST00000420706 NPATQ14207 1427 aa18.29■□□□□ 0.52
TMEM53-206ENST00000420706 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
TMEM53-206ENST00000420706 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
TMEM53-206ENST00000420706 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
TMEM53-206ENST00000420706 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
TMEM53-206ENST00000420706 MADDQ8WXG6 1647 aa18.27■□□□□ 0.51
TMEM53-206ENST00000420706 CFAP65Q6ZU64 1925 aaKnown RBP18.26■□□□□ 0.51
TMEM53-206ENST00000420706 MROH2AA6NES4 1674 aa18.25■□□□□ 0.51
TMEM53-206ENST00000420706 PTPRTO14522 1441 aa18.25■□□□□ 0.51
TMEM53-206ENST00000420706 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
TMEM53-206ENST00000420706 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
TMEM53-206ENST00000420706 CEBPAP49715 358 aaPredicted RBP18.24■□□□□ 0.51
TMEM53-206ENST00000420706 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
TMEM53-206ENST00000420706 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
TMEM53-206ENST00000420706 NOS1P29475 1434 aa18.23■□□□□ 0.51
TMEM53-206ENST00000420706 SPHKAPQ2M3C7 1700 aa18.2■□□□□ 0.5
TMEM53-206ENST00000420706 C3P01024 1663 aa18.2■□□□□ 0.5
TMEM53-206ENST00000420706 PREX1Q8TCU6 1659 aa18.2■□□□□ 0.5
TMEM53-206ENST00000420706 ERVK-7P63135 1459 aa18.2■□□□□ 0.5
TMEM53-206ENST00000420706 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
TMEM53-206ENST00000420706 TRPM2O94759 1503 aa18.18■□□□□ 0.5
TMEM53-206ENST00000420706 SPATA31D1Q6ZQQ2 1576 aa18.18■□□□□ 0.5
TMEM53-206ENST00000420706 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
TMEM53-206ENST00000420706 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
TMEM53-206ENST00000420706 PTPRMP28827 1452 aa18.16■□□□□ 0.5
TMEM53-206ENST00000420706 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
TMEM53-206ENST00000420706 SYNMO15061 1565 aa18.16■□□□□ 0.5
TMEM53-206ENST00000420706 IDI1Q13907 227 aa18.15■□□□□ 0.5
TMEM53-206ENST00000420706 TNRQ92752 1358 aa18.14■□□□□ 0.49
TMEM53-206ENST00000420706 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
TMEM53-206ENST00000420706 CLTCL1P53675 1640 aa18.13■□□□□ 0.49
TMEM53-206ENST00000420706 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
TMEM53-206ENST00000420706 KIF1BO60333 1816 aa18.07■□□□□ 0.48
TMEM53-206ENST00000420706 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
TMEM53-206ENST00000420706 TIMELESSQ9UNS1 1208 aa18.07■□□□□ 0.48
TMEM53-206ENST00000420706 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
TMEM53-206ENST00000420706 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
TMEM53-206ENST00000420706 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
TMEM53-206ENST00000420706 L3MBTL2Q969R5 705 aa18.05■□□□□ 0.48
TMEM53-206ENST00000420706 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
TMEM53-206ENST00000420706 TONSLQ96HA7 1378 aa18.04■□□□□ 0.48
TMEM53-206ENST00000420706 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
TMEM53-206ENST00000420706 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
TMEM53-206ENST00000420706 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-206ENST00000420706 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
TMEM53-206ENST00000420706 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
TMEM53-206ENST00000420706 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
TMEM53-206ENST00000420706 MYO3AQ8NEV4 1616 aa18.01■□□□□ 0.47
TMEM53-206ENST00000420706 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
TMEM53-206ENST00000420706 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
TMEM53-206ENST00000420706 RPGRIP1LQ68CZ1 1315 aa17.99■□□□□ 0.47
TMEM53-206ENST00000420706 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
TMEM53-206ENST00000420706 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
TMEM53-206ENST00000420706 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
TMEM53-206ENST00000420706 KDM5AP29375 1690 aaKnown RBP17.98■□□□□ 0.47
TMEM53-206ENST00000420706 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-206ENST00000420706 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
TMEM53-206ENST00000420706 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
TMEM53-206ENST00000420706 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-206ENST00000420706 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms