RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 MROH2AA6NES4 1674 aa26.94■■□□□ 1.9
EPCAM-203ENST00000419334 ESF1Q9H501 851 aaKnown RBP26.93■■□□□ 1.9
EPCAM-203ENST00000419334 FAM135AQ9P2D6 1515 aa26.93■■□□□ 1.9
EPCAM-203ENST00000419334 ROCK1Q13464 1354 aa26.93■■□□□ 1.9
EPCAM-203ENST00000419334 CLTCQ00610 1675 aaKnown RBP26.92■■□□□ 1.9
EPCAM-203ENST00000419334 C3P01024 1663 aa26.9■■□□□ 1.9
EPCAM-203ENST00000419334 ITGAEP38570 1179 aa26.89■■□□□ 1.9
EPCAM-203ENST00000419334 MROH1Q8NDA8 1641 aa26.88■■□□□ 1.89
EPCAM-203ENST00000419334 KDM5DQ9BY66 1539 aa26.87■■□□□ 1.89
EPCAM-203ENST00000419334 DEPDC5O75140 1603 aa26.87■■□□□ 1.89
EPCAM-203ENST00000419334 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
EPCAM-203ENST00000419334 ANKRD50Q9ULJ7 1429 aa26.84■■□□□ 1.89
EPCAM-203ENST00000419334 PRDM15P57071 1507 aaPredicted RBP26.84■■□□□ 1.89
EPCAM-203ENST00000419334 ZMYM3Q14202 1370 aa26.82■■□□□ 1.88
EPCAM-203ENST00000419334 CEBPAP49715 358 aaPredicted RBP26.81■■□□□ 1.88
EPCAM-203ENST00000419334 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
EPCAM-203ENST00000419334 WASHC2CQ9Y4E1 1318 aa26.79■■□□□ 1.88
EPCAM-203ENST00000419334 ABCC3O15438 1527 aa26.79■■□□□ 1.88
EPCAM-203ENST00000419334 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
EPCAM-203ENST00000419334 CEP152O94986 1710 aa26.78■■□□□ 1.88
EPCAM-203ENST00000419334 GCC2Q8IWJ2 1684 aa26.75■■□□□ 1.87
EPCAM-203ENST00000419334 NPATQ14207 1427 aa26.74■■□□□ 1.87
EPCAM-203ENST00000419334 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
EPCAM-203ENST00000419334 VWDEQ8N2E2 1590 aa26.74■■□□□ 1.87
EPCAM-203ENST00000419334 UNC13BO14795 1591 aa26.73■■□□□ 1.87
EPCAM-203ENST00000419334 CAMSAP1Q5T5Y3 1602 aa26.72■■□□□ 1.87
EPCAM-203ENST00000419334 PZPP20742 1482 aa26.72■■□□□ 1.87
EPCAM-203ENST00000419334 KANK1Q14678 1352 aa26.71■■□□□ 1.87
EPCAM-203ENST00000419334 NAIPQ13075 1403 aa26.7■■□□□ 1.86
EPCAM-203ENST00000419334 LMTK3Q96Q04 1460 aa26.69■■□□□ 1.86
EPCAM-203ENST00000419334 HFM1A2PYH4 1435 aa26.69■■□□□ 1.86
EPCAM-203ENST00000419334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.69■■□□□ 1.86
EPCAM-203ENST00000419334 LMTK2Q8IWU2 1503 aa26.69■■□□□ 1.86
EPCAM-203ENST00000419334 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
EPCAM-203ENST00000419334 UHRF1BP1Q6BDS2 1440 aa26.65■■□□□ 1.86
EPCAM-203ENST00000419334 IQGAP3Q86VI3 1631 aa26.61■■□□□ 1.85
EPCAM-203ENST00000419334 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
EPCAM-203ENST00000419334 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
EPCAM-203ENST00000419334 SPATA31D1Q6ZQQ2 1576 aa26.6■■□□□ 1.85
EPCAM-203ENST00000419334 TET3O43151 1660 aa26.6■■□□□ 1.85
EPCAM-203ENST00000419334 FBXO31Q5XUX0 539 aaPredicted RBP26.59■■□□□ 1.85
EPCAM-203ENST00000419334 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
EPCAM-203ENST00000419334 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
EPCAM-203ENST00000419334 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
EPCAM-203ENST00000419334 TNRQ92752 1358 aa26.57■■□□□ 1.84
EPCAM-203ENST00000419334 NUP155O75694 1391 aa26.55■■□□□ 1.84
EPCAM-203ENST00000419334 CEP170BQ9Y4F5 1589 aaPredicted RBP26.54■■□□□ 1.84
EPCAM-203ENST00000419334 RPRD2Q5VT52 1461 aaKnown RBP26.53■■□□□ 1.84
EPCAM-203ENST00000419334 A2ML1A8K2U0 1454 aa26.5■■□□□ 1.83
EPCAM-203ENST00000419334 NLRP1Q9C000 1473 aa26.5■■□□□ 1.83
EPCAM-203ENST00000419334 HSPA2P54652 639 aa26.5■■□□□ 1.83
EPCAM-203ENST00000419334 E9PCH4 1651 aa26.49■■□□□ 1.83
EPCAM-203ENST00000419334 NOS1P29475 1434 aa26.46■■□□□ 1.83
EPCAM-203ENST00000419334 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
EPCAM-203ENST00000419334 SYNMO15061 1565 aa26.44■■□□□ 1.82
EPCAM-203ENST00000419334 UGGT1Q9NYU2 1555 aa26.41■■□□□ 1.82
EPCAM-203ENST00000419334 STRCQ7RTU9 1775 aa26.4■■□□□ 1.82
EPCAM-203ENST00000419334 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.82
EPCAM-203ENST00000419334 ILDR1Q86SU0 546 aaPredicted RBP26.39■■□□□ 1.82
EPCAM-203ENST00000419334 TRIM52Q96A61 297 aa26.39■■□□□ 1.82
EPCAM-203ENST00000419334 PLA2R1Q13018 1463 aa26.38■■□□□ 1.81
EPCAM-203ENST00000419334 UBR1Q8IWV7 1749 aa26.37■■□□□ 1.81
EPCAM-203ENST00000419334 PIK3C2BO00750 1634 aa26.36■■□□□ 1.81
EPCAM-203ENST00000419334 RAB3GAP2Q9H2M9 1393 aa26.36■■□□□ 1.81
EPCAM-203ENST00000419334 KDM5AP29375 1690 aaKnown RBP26.36■■□□□ 1.81
EPCAM-203ENST00000419334 SPHKAPQ2M3C7 1700 aa26.35■■□□□ 1.81
EPCAM-203ENST00000419334 SLC52A1Q9NWF4 448 aa26.33■■□□□ 1.81
EPCAM-203ENST00000419334 THEMISQ8N1K5 641 aaPredicted RBP26.32■■□□□ 1.8
EPCAM-203ENST00000419334 IDI1Q13907 227 aa26.31■■□□□ 1.8
EPCAM-203ENST00000419334 PTPRTO14522 1441 aa26.31■■□□□ 1.8
EPCAM-203ENST00000419334 SLC4A1APQ9BWU0 796 aaKnown RBP26.3■■□□□ 1.8
EPCAM-203ENST00000419334 POLR1AO95602 1720 aaPredicted RBP26.29■■□□□ 1.8
EPCAM-203ENST00000419334 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
EPCAM-203ENST00000419334 HRCP23327 699 aa26.27■■□□□ 1.8
EPCAM-203ENST00000419334 PKD2Q13563 968 aa26.27■■□□□ 1.8
EPCAM-203ENST00000419334 TRPM2O94759 1503 aa26.25■■□□□ 1.79
EPCAM-203ENST00000419334 SLIT1O75093 1534 aa26.24■■□□□ 1.79
EPCAM-203ENST00000419334 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
EPCAM-203ENST00000419334 DMRT2Q9Y5R5 561 aa26.24■■□□□ 1.79
EPCAM-203ENST00000419334 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
EPCAM-203ENST00000419334 STAG3Q9UJ98 1225 aa26.23■■□□□ 1.79
EPCAM-203ENST00000419334 TMEM131LA2VDJ0 1609 aa26.23■■□□□ 1.79
EPCAM-203ENST00000419334 MYO5BQ9ULV0 1848 aa26.23■■□□□ 1.79
EPCAM-203ENST00000419334 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
EPCAM-203ENST00000419334 NEURL4Q96JN8 1562 aa26.21■■□□□ 1.79
EPCAM-203ENST00000419334 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
EPCAM-203ENST00000419334 ANKLE2Q86XL3 938 aa26.2■■□□□ 1.78
EPCAM-203ENST00000419334 CLTCL1P53675 1640 aa26.2■■□□□ 1.78
EPCAM-203ENST00000419334 TMEM2Q9UHN6 1383 aa26.18■■□□□ 1.78
EPCAM-203ENST00000419334 MED14O60244 1454 aa26.17■■□□□ 1.78
EPCAM-203ENST00000419334 SCAF11Q99590 1463 aaKnown RBP26.16■■□□□ 1.78
EPCAM-203ENST00000419334 KIF1BO60333 1816 aa26.14■■□□□ 1.78
EPCAM-203ENST00000419334 FOXD1Q16676 465 aa26.14■■□□□ 1.78
EPCAM-203ENST00000419334 IQGAP1P46940 1657 aa26.12■■□□□ 1.77
EPCAM-203ENST00000419334 CHGAP10645 457 aaKnown RBP26.11■■□□□ 1.77
EPCAM-203ENST00000419334 EID1Q9Y6B2 187 aa26.11■■□□□ 1.77
EPCAM-203ENST00000419334 NPHP4O75161 1426 aaPredicted RBP26.11■■□□□ 1.77
EPCAM-203ENST00000419334 LTKP29376 864 aa26.1■■□□□ 1.77
EPCAM-203ENST00000419334 TXNDC2Q86VQ3 553 aa26.1■■□□□ 1.77
EPCAM-203ENST00000419334 ZFYVE9O95405 1425 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms