RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
SSB-204ENST00000417292 POLR1AO95602 1720 aaPredicted RBP22.47■■□□□ 1.19
SSB-204ENST00000417292 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
SSB-204ENST00000417292 TNRQ92752 1358 aa22.44■■□□□ 1.18
SSB-204ENST00000417292 DHX29Q7Z478 1369 aaKnown RBP22.42■■□□□ 1.18
SSB-204ENST00000417292 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
SSB-204ENST00000417292 VWDEQ8N2E2 1590 aa22.42■■□□□ 1.18
SSB-204ENST00000417292 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
SSB-204ENST00000417292 MTUS2Q5JR59 1369 aa22.41■■□□□ 1.18
SSB-204ENST00000417292 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
SSB-204ENST00000417292 PZPP20742 1482 aa22.4■■□□□ 1.18
SSB-204ENST00000417292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.18
SSB-204ENST00000417292 KIF3BO15066 747 aa22.38■■□□□ 1.17
SSB-204ENST00000417292 ANKLE2Q86XL3 938 aa22.37■■□□□ 1.17
SSB-204ENST00000417292 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
SSB-204ENST00000417292 THEMISQ8N1K5 641 aaPredicted RBP22.34■■□□□ 1.17
SSB-204ENST00000417292 MED14O60244 1454 aa22.34■■□□□ 1.17
SSB-204ENST00000417292 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
SSB-204ENST00000417292 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.17
SSB-204ENST00000417292 MIA2Q96PC5 1412 aa22.33■■□□□ 1.17
SSB-204ENST00000417292 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
SSB-204ENST00000417292 FAM135AQ9P2D6 1515 aa22.32■■□□□ 1.16
SSB-204ENST00000417292 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
SSB-204ENST00000417292 NLRP1Q9C000 1473 aa22.32■■□□□ 1.16
SSB-204ENST00000417292 UGGT1Q9NYU2 1555 aa22.32■■□□□ 1.16
SSB-204ENST00000417292 EHBP1L1Q8N3D4 1523 aa22.3■■□□□ 1.16
SSB-204ENST00000417292 STRCP1A6NGW2 1772 aa22.29■■□□□ 1.16
SSB-204ENST00000417292 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
SSB-204ENST00000417292 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
SSB-204ENST00000417292 IQGAP1P46940 1657 aa22.28■■□□□ 1.16
SSB-204ENST00000417292 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
SSB-204ENST00000417292 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
SSB-204ENST00000417292 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
SSB-204ENST00000417292 RNF17Q9BXT8 1623 aaKnown RBP22.21■■□□□ 1.15
SSB-204ENST00000417292 RSPH4AQ5TD94 716 aa22.21■■□□□ 1.15
SSB-204ENST00000417292 SYNMO15061 1565 aa22.2■■□□□ 1.14
SSB-204ENST00000417292 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
SSB-204ENST00000417292 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
SSB-204ENST00000417292 ABCC3O15438 1527 aa22.17■■□□□ 1.14
SSB-204ENST00000417292 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
SSB-204ENST00000417292 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
SSB-204ENST00000417292 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
SSB-204ENST00000417292 TSPY4P0CV99 314 aa22.14■■□□□ 1.13
SSB-204ENST00000417292 TSPY10P0CW01 314 aa22.14■■□□□ 1.13
SSB-204ENST00000417292 UBR1Q8IWV7 1749 aa22.11■■□□□ 1.13
SSB-204ENST00000417292 SCAF11Q99590 1463 aaKnown RBP22.1■■□□□ 1.13
SSB-204ENST00000417292 MROH1Q8NDA8 1641 aa22.1■■□□□ 1.13
SSB-204ENST00000417292 LTKP29376 864 aa22.1■■□□□ 1.13
SSB-204ENST00000417292 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
SSB-204ENST00000417292 ARHGAP23Q9P227 1491 aa22.07■■□□□ 1.12
SSB-204ENST00000417292 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
SSB-204ENST00000417292 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
SSB-204ENST00000417292 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
SSB-204ENST00000417292 CEP152O94986 1710 aa22.06■■□□□ 1.12
SSB-204ENST00000417292 TXNDC2Q86VQ3 553 aa22.05■■□□□ 1.12
SSB-204ENST00000417292 SLIT1O75093 1534 aa22.05■■□□□ 1.12
SSB-204ENST00000417292 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
SSB-204ENST00000417292 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
SSB-204ENST00000417292 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
SSB-204ENST00000417292 EID1Q9Y6B2 187 aa21.96■■□□□ 1.11
SSB-204ENST00000417292 TMEM94Q12767 1356 aa21.96■■□□□ 1.11
SSB-204ENST00000417292 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
SSB-204ENST00000417292 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
SSB-204ENST00000417292 TMEM2Q9UHN6 1383 aa21.95■■□□□ 1.1
SSB-204ENST00000417292 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
SSB-204ENST00000417292 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
SSB-204ENST00000417292 ROBO1Q9Y6N7 1651 aa21.93■■□□□ 1.1
SSB-204ENST00000417292 MAP3K1Q13233 1512 aa21.92■■□□□ 1.1
SSB-204ENST00000417292 RBM33Q96EV2 1170 aaKnown RBP21.92■■□□□ 1.1
SSB-204ENST00000417292 KCNA6P17658 529 aa21.9■■□□□ 1.1
SSB-204ENST00000417292 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.09
SSB-204ENST00000417292 TET3O43151 1660 aa21.88■■□□□ 1.09
SSB-204ENST00000417292 KIF15Q9NS87 1388 aa21.88■■□□□ 1.09
SSB-204ENST00000417292 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
SSB-204ENST00000417292 SLC26A8Q96RN1 970 aa21.88■■□□□ 1.09
SSB-204ENST00000417292 PROSER2Q86WR7 435 aaPredicted RBP21.87■■□□□ 1.09
SSB-204ENST00000417292 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
SSB-204ENST00000417292 EFCAB6Q5THR3 1501 aa21.86■■□□□ 1.09
SSB-204ENST00000417292 IDI1Q13907 227 aa21.86■■□□□ 1.09
SSB-204ENST00000417292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.097e-7■■■□□ 17
SSB-204ENST00000417292 STAG3Q9UJ98 1225 aa21.86■■□□□ 1.09
SSB-204ENST00000417292 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
SSB-204ENST00000417292 RRP7BPQ9NSQ0 103 aa21.85■■□□□ 1.09
SSB-204ENST00000417292 KDM5AP29375 1690 aaKnown RBP21.85■■□□□ 1.09
SSB-204ENST00000417292 VPS8Q8N3P4 1428 aa21.83■■□□□ 1.09
SSB-204ENST00000417292 ABCC5O15440 1437 aa21.82■■□□□ 1.08
SSB-204ENST00000417292 NWD1Q149M9 1564 aa21.81■■□□□ 1.08
SSB-204ENST00000417292 CROCC2H7BZ55 1655 aa21.8■■□□□ 1.08
SSB-204ENST00000417292 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
SSB-204ENST00000417292 SLAIN2Q9P270 581 aa21.79■■□□□ 1.08
SSB-204ENST00000417292 PHLPP1O60346 1717 aa21.79■■□□□ 1.08
SSB-204ENST00000417292 MSH6P52701 1360 aa21.78■■□□□ 1.08
SSB-204ENST00000417292 KANK1Q14678 1352 aa21.78■■□□□ 1.08
SSB-204ENST00000417292 LMTK2Q8IWU2 1503 aa21.78■■□□□ 1.08
SSB-204ENST00000417292 JCADQ9P266 1359 aa21.77■■□□□ 1.08
SSB-204ENST00000417292 NOS1P29475 1434 aa21.76■■□□□ 1.07
SSB-204ENST00000417292 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
SSB-204ENST00000417292 COL16A1Q07092 1604 aaPredicted RBP21.73■■□□□ 1.07
SSB-204ENST00000417292 DAPK1P53355 1430 aa21.73■■□□□ 1.07
SSB-204ENST00000417292 PTPN23Q9H3S7 1636 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 344 ms