RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
RPA3-204ENST00000406109 ATP7AQ04656 1500 aa10.15□□□□□ -0.78
RPA3-204ENST00000406109 A2MP01023 1474 aa10.15□□□□□ -0.78
RPA3-204ENST00000406109 HSPA1LP34931 641 aa10.14□□□□□ -0.79
RPA3-204ENST00000406109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.792e-6■■■■□ 26.7
RPA3-204ENST00000406109 GGT6Q6P531 493 aa10.13□□□□□ -0.79
RPA3-204ENST00000406109 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
RPA3-204ENST00000406109 FYCO1Q9BQS8 1478 aa10.12□□□□□ -0.79
RPA3-204ENST00000406109 A2ML1A8K2U0 1454 aa10.11□□□□□ -0.79
RPA3-204ENST00000406109 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
RPA3-204ENST00000406109 MED1Q15648 1581 aaPredicted RBP10.11□□□□□ -0.79
RPA3-204ENST00000406109 NEURL4Q96JN8 1562 aa10.11□□□□□ -0.79
RPA3-204ENST00000406109 CFDP1Q9UEE9 299 aaPredicted RBP10.11□□□□□ -0.79
RPA3-204ENST00000406109 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
RPA3-204ENST00000406109 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
RPA3-204ENST00000406109 FBXO31Q5XUX0 539 aaPredicted RBP10.1□□□□□ -0.79
RPA3-204ENST00000406109 PLEKHH2Q8IVE3 1493 aa10.1□□□□□ -0.79
RPA3-204ENST00000406109 PIP4K2BP78356 416 aa10.09□□□□□ -0.79
RPA3-204ENST00000406109 SHANK2Q9UPX8 1470 aa10.09□□□□□ -0.79
RPA3-204ENST00000406109 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
RPA3-204ENST00000406109 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
RPA3-204ENST00000406109 CCNB3Q8WWL7 1395 aa10.08□□□□□ -0.8
RPA3-204ENST00000406109 VWDEQ8N2E2 1590 aa10.08□□□□□ -0.8
RPA3-204ENST00000406109 CPS1P31327 1500 aa10.07□□□□□ -0.8
RPA3-204ENST00000406109 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
RPA3-204ENST00000406109 TOM1O60784 492 aa10.07□□□□□ -0.8
RPA3-204ENST00000406109 RTEL1-TNFRSF6BF6WH68 1400 aa10.07□□□□□ -0.8
RPA3-204ENST00000406109 TNRQ92752 1358 aa10.06□□□□□ -0.8
RPA3-204ENST00000406109 PZPP20742 1482 aa10.05□□□□□ -0.8
RPA3-204ENST00000406109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPA3-204ENST00000406109 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
RPA3-204ENST00000406109 MED14O60244 1454 aa10.04□□□□□ -0.8
RPA3-204ENST00000406109 STRCP1A6NGW2 1772 aa10.04□□□□□ -0.8
RPA3-204ENST00000406109 ANKLE2Q86XL3 938 aa10.04□□□□□ -0.8
RPA3-204ENST00000406109 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
RPA3-204ENST00000406109 KIF3BO15066 747 aa10.03□□□□□ -0.8
RPA3-204ENST00000406109 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.8
RPA3-204ENST00000406109 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
RPA3-204ENST00000406109 DEPDC5O75140 1603 aa10.02□□□□□ -0.81
RPA3-204ENST00000406109 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.81
RPA3-204ENST00000406109 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
RPA3-204ENST00000406109 RGS17Q9UGC6 210 aaPredicted RBP10.01□□□□□ -0.81
RPA3-204ENST00000406109 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
RPA3-204ENST00000406109 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
RPA3-204ENST00000406109 WASHC2CQ9Y4E1 1318 aa10.01□□□□□ -0.81
RPA3-204ENST00000406109 UGGT1Q9NYU2 1555 aa10.01□□□□□ -0.81
RPA3-204ENST00000406109 CEP162Q5TB80 1403 aa10□□□□□ -0.81
RPA3-204ENST00000406109 LRRC7Q96NW7 1537 aa10□□□□□ -0.81
RPA3-204ENST00000406109 IQGAP1P46940 1657 aa9.99□□□□□ -0.81
RPA3-204ENST00000406109 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
RPA3-204ENST00000406109 EHBP1L1Q8N3D4 1523 aa9.97□□□□□ -0.81
RPA3-204ENST00000406109 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
RPA3-204ENST00000406109 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
RPA3-204ENST00000406109 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.81
RPA3-204ENST00000406109 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
RPA3-204ENST00000406109 ABCC3O15438 1527 aa9.96□□□□□ -0.82
RPA3-204ENST00000406109 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
RPA3-204ENST00000406109 LTKP29376 864 aa9.95□□□□□ -0.82
RPA3-204ENST00000406109 NCOA2Q15596 1464 aa9.95□□□□□ -0.82
RPA3-204ENST00000406109 RNF17Q9BXT8 1623 aaKnown RBP9.95□□□□□ -0.82
RPA3-204ENST00000406109 SYNMO15061 1565 aa9.94□□□□□ -0.82
RPA3-204ENST00000406109 ARHGEF5Q12774 1597 aa9.94□□□□□ -0.82
RPA3-204ENST00000406109 ERVK-7P63135 1459 aa9.94□□□□□ -0.82
RPA3-204ENST00000406109 UBR1Q8IWV7 1749 aa9.93□□□□□ -0.82
RPA3-204ENST00000406109 MROH1Q8NDA8 1641 aa9.93□□□□□ -0.82
RPA3-204ENST00000406109 ARHGAP23Q9P227 1491 aa9.92□□□□□ -0.82
RPA3-204ENST00000406109 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
RPA3-204ENST00000406109 SCAF11Q99590 1463 aaKnown RBP9.91□□□□□ -0.82
RPA3-204ENST00000406109 TSPY4P0CV99 314 aa9.91□□□□□ -0.82
RPA3-204ENST00000406109 TSPY10P0CW01 314 aa9.91□□□□□ -0.82
RPA3-204ENST00000406109 POTEAQ6S8J7 498 aa9.91□□□□□ -0.82
RPA3-204ENST00000406109 SLIT1O75093 1534 aa9.91□□□□□ -0.82
RPA3-204ENST00000406109 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.83
RPA3-204ENST00000406109 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
RPA3-204ENST00000406109 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
RPA3-204ENST00000406109 CEP152O94986 1710 aa9.89□□□□□ -0.83
RPA3-204ENST00000406109 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
RPA3-204ENST00000406109 LOC105371045A0A1W2PR82 267 aa9.88□□□□□ -0.83
RPA3-204ENST00000406109 ARHGAP31Q2M1Z3 1444 aa9.87□□□□□ -0.83
RPA3-204ENST00000406109 EP400Q96L91 3159 aa9.86□□□□□ -0.83
RPA3-204ENST00000406109 TMEM94Q12767 1356 aa9.86□□□□□ -0.83
RPA3-204ENST00000406109 TMEM2Q9UHN6 1383 aa9.86□□□□□ -0.83
RPA3-204ENST00000406109 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
RPA3-204ENST00000406109 KCNA4P22459 653 aa9.85□□□□□ -0.83
RPA3-204ENST00000406109 TET3O43151 1660 aa9.85□□□□□ -0.83
RPA3-204ENST00000406109 MAP3K1Q13233 1512 aa9.85□□□□□ -0.83
RPA3-204ENST00000406109 ROBO1Q9Y6N7 1651 aa9.84□□□□□ -0.83
RPA3-204ENST00000406109 PRDM15P57071 1507 aaPredicted RBP9.84□□□□□ -0.83
RPA3-204ENST00000406109 DUOX2Q9NRD8 1548 aa9.84□□□□□ -0.83
RPA3-204ENST00000406109 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
RPA3-204ENST00000406109 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
RPA3-204ENST00000406109 PIK3C2BO00750 1634 aa9.84□□□□□ -0.83
RPA3-204ENST00000406109 KCNA6P17658 529 aa9.83□□□□□ -0.84
RPA3-204ENST00000406109 IDI1Q13907 227 aa9.83□□□□□ -0.84
RPA3-204ENST00000406109 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
RPA3-204ENST00000406109 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
RPA3-204ENST00000406109 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
RPA3-204ENST00000406109 KDM5AP29375 1690 aaKnown RBP9.81□□□□□ -0.84
RPA3-204ENST00000406109 KIF15Q9NS87 1388 aa9.81□□□□□ -0.84
RPA3-204ENST00000406109 SETD1AO15047 1707 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms