RNA–Protein interactions for RNA: ENST00000400056.3

KRT18P13-201, Transcript of keratin 18 pseudogene 13, humanhuman

BASIC

Gene KRT18P13, Length 1,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P13-201ENST00000400056 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
KRT18P13-201ENST00000400056 NEURL4Q96JN8 1562 aa27.56■■■□□ 2
KRT18P13-201ENST00000400056 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
KRT18P13-201ENST00000400056 TIAM1Q13009 1591 aa27.53■■■□□ 2
KRT18P13-201ENST00000400056 DHX29Q7Z478 1369 aaKnown RBP27.53■■■□□ 2
KRT18P13-201ENST00000400056 ZNF644Q9H582 1327 aaPredicted RBP27.53■■■□□ 2
KRT18P13-201ENST00000400056 MBD5Q9P267 1494 aa27.52■■■□□ 2
KRT18P13-201ENST00000400056 KDM5DQ9BY66 1539 aa27.51■■■□□ 2
KRT18P13-201ENST00000400056 PZPP20742 1482 aa27.51■■■□□ 2
KRT18P13-201ENST00000400056 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
KRT18P13-201ENST00000400056 FBXO31Q5XUX0 539 aaPredicted RBP27.5■■□□□ 1.99
KRT18P13-201ENST00000400056 EHBP1L1Q8N3D4 1523 aa27.48■■□□□ 1.99
KRT18P13-201ENST00000400056 KIF3BO15066 747 aa27.48■■□□□ 1.99
KRT18P13-201ENST00000400056 ANKLE2Q86XL3 938 aa27.48■■□□□ 1.99
KRT18P13-201ENST00000400056 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
KRT18P13-201ENST00000400056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.46■■□□□ 1.99
KRT18P13-201ENST00000400056 THEMISQ8N1K5 641 aaPredicted RBP27.45■■□□□ 1.98
KRT18P13-201ENST00000400056 WASHC2CQ9Y4E1 1318 aa27.44■■□□□ 1.98
KRT18P13-201ENST00000400056 VWDEQ8N2E2 1590 aa27.44■■□□□ 1.98
KRT18P13-201ENST00000400056 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
KRT18P13-201ENST00000400056 CCDC141Q6ZP82 1450 aa27.43■■□□□ 1.98
KRT18P13-201ENST00000400056 UGGT1Q9NYU2 1555 aa27.42■■□□□ 1.98
KRT18P13-201ENST00000400056 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
KRT18P13-201ENST00000400056 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
KRT18P13-201ENST00000400056 DEPDC5O75140 1603 aa27.41■■□□□ 1.98
KRT18P13-201ENST00000400056 MIA2Q96PC5 1412 aa27.41■■□□□ 1.98
KRT18P13-201ENST00000400056 MED14O60244 1454 aa27.39■■□□□ 1.98
KRT18P13-201ENST00000400056 CAMSAP2Q08AD1 1489 aa27.36■■□□□ 1.97
KRT18P13-201ENST00000400056 IQGAP1P46940 1657 aa27.36■■□□□ 1.97
KRT18P13-201ENST00000400056 ALKQ9UM73 1620 aa27.35■■□□□ 1.97
KRT18P13-201ENST00000400056 RSPH4AQ5TD94 716 aa27.34■■□□□ 1.97
KRT18P13-201ENST00000400056 RNF17Q9BXT8 1623 aaKnown RBP27.3■■□□□ 1.96
KRT18P13-201ENST00000400056 SYNMO15061 1565 aa27.3■■□□□ 1.96
KRT18P13-201ENST00000400056 SENP3Q9H4L4 574 aaPredicted RBP27.29■■□□□ 1.96
KRT18P13-201ENST00000400056 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
KRT18P13-201ENST00000400056 LRRC7Q96NW7 1537 aa27.27■■□□□ 1.96
KRT18P13-201ENST00000400056 TSPY4P0CV99 314 aa27.26■■□□□ 1.95
KRT18P13-201ENST00000400056 TSPY10P0CW01 314 aa27.26■■□□□ 1.95
KRT18P13-201ENST00000400056 ARHGEF5Q12774 1597 aa27.26■■□□□ 1.95
KRT18P13-201ENST00000400056 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
KRT18P13-201ENST00000400056 STRCP1A6NGW2 1772 aa27.24■■□□□ 1.95
KRT18P13-201ENST00000400056 ABCC3O15438 1527 aa27.23■■□□□ 1.95
KRT18P13-201ENST00000400056 ERVK-7P63135 1459 aa27.2■■□□□ 1.95
KRT18P13-201ENST00000400056 SCAF11Q99590 1463 aaKnown RBP27.16■■□□□ 1.94
KRT18P13-201ENST00000400056 EIF2AK4Q9P2K8 1649 aaKnown RBP27.16■■□□□ 1.94
KRT18P13-201ENST00000400056 MAST1Q9Y2H9 1570 aa27.14■■□□□ 1.93
KRT18P13-201ENST00000400056 UBR1Q8IWV7 1749 aa27.13■■□□□ 1.93
KRT18P13-201ENST00000400056 MROH1Q8NDA8 1641 aa27.09■■□□□ 1.93
KRT18P13-201ENST00000400056 CEP152O94986 1710 aa27.09■■□□□ 1.93
KRT18P13-201ENST00000400056 SLIT1O75093 1534 aa27.06■■□□□ 1.92
KRT18P13-201ENST00000400056 TXNDC2Q86VQ3 553 aa27.06■■□□□ 1.92
KRT18P13-201ENST00000400056 ARHGAP23Q9P227 1491 aa27.06■■□□□ 1.92
KRT18P13-201ENST00000400056 RGS17Q9UGC6 210 aaPredicted RBP27.05■■□□□ 1.92
KRT18P13-201ENST00000400056 EID1Q9Y6B2 187 aa27.04■■□□□ 1.92
KRT18P13-201ENST00000400056 LTKP29376 864 aa27.03■■□□□ 1.92
KRT18P13-201ENST00000400056 CFAP65Q6ZU64 1925 aaKnown RBP27.03■■□□□ 1.92
KRT18P13-201ENST00000400056 DUOX2Q9NRD8 1548 aa27.01■■□□□ 1.91
KRT18P13-201ENST00000400056 XIRP1Q702N8 1843 aaKnown RBP27.01■■□□□ 1.91
KRT18P13-201ENST00000400056 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
KRT18P13-201ENST00000400056 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
KRT18P13-201ENST00000400056 ARHGAP31Q2M1Z3 1444 aa26.99■■□□□ 1.91
KRT18P13-201ENST00000400056 PRDM15P57071 1507 aaPredicted RBP26.97■■□□□ 1.91
KRT18P13-201ENST00000400056 MYOM3Q5VTT5 1437 aa26.95■■□□□ 1.9
KRT18P13-201ENST00000400056 STAG3Q9UJ98 1225 aa26.94■■□□□ 1.9
KRT18P13-201ENST00000400056 TMEM2Q9UHN6 1383 aa26.94■■□□□ 1.9
KRT18P13-201ENST00000400056 PIK3C2BO00750 1634 aa26.94■■□□□ 1.9
KRT18P13-201ENST00000400056 TMEM94Q12767 1356 aa26.93■■□□□ 1.9
KRT18P13-201ENST00000400056 KIF15Q9NS87 1388 aa26.92■■□□□ 1.9
KRT18P13-201ENST00000400056 ERBINQ96RT1 1412 aa26.91■■□□□ 1.9
KRT18P13-201ENST00000400056 POTEAQ6S8J7 498 aa26.9■■□□□ 1.9
KRT18P13-201ENST00000400056 ROBO1Q9Y6N7 1651 aa26.89■■□□□ 1.9
KRT18P13-201ENST00000400056 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.89
KRT18P13-201ENST00000400056 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.89
KRT18P13-201ENST00000400056 KANK1Q14678 1352 aa26.87■■□□□ 1.89
KRT18P13-201ENST00000400056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.87■■□□□ 1.89
KRT18P13-201ENST00000400056 KDM5AP29375 1690 aaKnown RBP26.86■■□□□ 1.89
KRT18P13-201ENST00000400056 KCNA6P17658 529 aa26.86■■□□□ 1.89
KRT18P13-201ENST00000400056 MAP3K1Q13233 1512 aa26.85■■□□□ 1.89
KRT18P13-201ENST00000400056 PROSER2Q86WR7 435 aaPredicted RBP26.85■■□□□ 1.89
KRT18P13-201ENST00000400056 RRP7BPQ9NSQ0 103 aa26.84■■□□□ 1.89
KRT18P13-201ENST00000400056 CROCC2H7BZ55 1655 aa26.83■■□□□ 1.89
KRT18P13-201ENST00000400056 KANK4Q5T7N3 995 aaPredicted RBP26.82■■□□□ 1.88
KRT18P13-201ENST00000400056 SLC26A8Q96RN1 970 aa26.82■■□□□ 1.88
KRT18P13-201ENST00000400056 NKTRP30414 1462 aaKnown RBP26.81■■□□□ 1.88
KRT18P13-201ENST00000400056 TET3O43151 1660 aa26.79■■□□□ 1.88
KRT18P13-201ENST00000400056 RBM33Q96EV2 1170 aaKnown RBP26.79■■□□□ 1.88
KRT18P13-201ENST00000400056 MSH6P52701 1360 aa26.79■■□□□ 1.88
KRT18P13-201ENST00000400056 IDI1Q13907 227 aa26.78■■□□□ 1.88
KRT18P13-201ENST00000400056 ABCC5O15440 1437 aa26.78■■□□□ 1.88
KRT18P13-201ENST00000400056 NWD1Q149M9 1564 aa26.78■■□□□ 1.88
KRT18P13-201ENST00000400056 LMTK2Q8IWU2 1503 aa26.77■■□□□ 1.88
KRT18P13-201ENST00000400056 BCANQ96GW7 911 aa26.76■■□□□ 1.87
KRT18P13-201ENST00000400056 ADGRB3O60242 1522 aa26.75■■□□□ 1.87
KRT18P13-201ENST00000400056 SETD1AO15047 1707 aaKnown RBP26.75■■□□□ 1.87
KRT18P13-201ENST00000400056 PHLPP1O60346 1717 aa26.75■■□□□ 1.87
KRT18P13-201ENST00000400056 JCADQ9P266 1359 aa26.74■■□□□ 1.87
KRT18P13-201ENST00000400056 PTPN23Q9H3S7 1636 aa26.73■■□□□ 1.87
KRT18P13-201ENST00000400056 DAPK1P53355 1430 aa26.73■■□□□ 1.87
KRT18P13-201ENST00000400056 SLAIN2Q9P270 581 aa26.71■■□□□ 1.87
KRT18P13-201ENST00000400056 NOS1P29475 1434 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms