RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 ADGRL2O95490 1459 aa26.63■■□□□ 1.85
SMIM11A-202ENST00000399295 ZMYM3Q14202 1370 aa26.63■■□□□ 1.85
SMIM11A-202ENST00000399295 PTPRKQ15262 1439 aa26.63■■□□□ 1.85
SMIM11A-202ENST00000399295 RRBP1Q9P2E9 1410 aaKnown RBP26.63■■□□□ 1.85
SMIM11A-202ENST00000399295 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
SMIM11A-202ENST00000399295 ERBINQ96RT1 1412 aa26.61■■□□□ 1.85
SMIM11A-202ENST00000399295 WASHC2CQ9Y4E1 1318 aa26.61■■□□□ 1.85
SMIM11A-202ENST00000399295 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
SMIM11A-202ENST00000399295 EIF2AK4Q9P2K8 1649 aaKnown RBP26.6■■□□□ 1.85
SMIM11A-202ENST00000399295 C3P01024 1663 aa26.58■■□□□ 1.85
SMIM11A-202ENST00000399295 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
SMIM11A-202ENST00000399295 RNF17Q9BXT8 1623 aaKnown RBP26.55■■□□□ 1.84
SMIM11A-202ENST00000399295 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
SMIM11A-202ENST00000399295 KDM5DQ9BY66 1539 aa26.55■■□□□ 1.84
SMIM11A-202ENST00000399295 NPATQ14207 1427 aa26.54■■□□□ 1.84
SMIM11A-202ENST00000399295 LMTK3Q96Q04 1460 aa26.54■■□□□ 1.84
SMIM11A-202ENST00000399295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.52■■□□□ 1.84
SMIM11A-202ENST00000399295 PREX1Q8TCU6 1659 aa26.51■■□□□ 1.83
SMIM11A-202ENST00000399295 ANKRD50Q9ULJ7 1429 aa26.51■■□□□ 1.83
SMIM11A-202ENST00000399295 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
SMIM11A-202ENST00000399295 MROH1Q8NDA8 1641 aa26.48■■□□□ 1.83
SMIM11A-202ENST00000399295 ABCC3O15438 1527 aa26.47■■□□□ 1.83
SMIM11A-202ENST00000399295 HSPA2P54652 639 aa26.46■■□□□ 1.83
SMIM11A-202ENST00000399295 KANK1Q14678 1352 aa26.46■■□□□ 1.83
SMIM11A-202ENST00000399295 PRDM15P57071 1507 aaPredicted RBP26.44■■□□□ 1.82
SMIM11A-202ENST00000399295 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
SMIM11A-202ENST00000399295 PZPP20742 1482 aa26.43■■□□□ 1.82
SMIM11A-202ENST00000399295 ZC3H13Q5T200 1668 aaKnown RBP26.42■■□□□ 1.82
SMIM11A-202ENST00000399295 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
SMIM11A-202ENST00000399295 TNRQ92752 1358 aa26.36■■□□□ 1.81
SMIM11A-202ENST00000399295 CEP152O94986 1710 aa26.36■■□□□ 1.81
SMIM11A-202ENST00000399295 DMRT2Q9Y5R5 561 aa26.35■■□□□ 1.81
SMIM11A-202ENST00000399295 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
SMIM11A-202ENST00000399295 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.81
SMIM11A-202ENST00000399295 ARHGAP31Q2M1Z3 1444 aa26.33■■□□□ 1.81
SMIM11A-202ENST00000399295 LMTK2Q8IWU2 1503 aa26.32■■□□□ 1.8
SMIM11A-202ENST00000399295 NAIPQ13075 1403 aa26.31■■□□□ 1.8
SMIM11A-202ENST00000399295 MYO3AQ8NEV4 1616 aa26.29■■□□□ 1.8
SMIM11A-202ENST00000399295 ERVK-7P63135 1459 aa26.29■■□□□ 1.8
SMIM11A-202ENST00000399295 UNC13BO14795 1591 aa26.28■■□□□ 1.8
SMIM11A-202ENST00000399295 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
SMIM11A-202ENST00000399295 NUP155O75694 1391 aa26.27■■□□□ 1.8
SMIM11A-202ENST00000399295 HFM1A2PYH4 1435 aa26.27■■□□□ 1.8
SMIM11A-202ENST00000399295 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.79
SMIM11A-202ENST00000399295 CEP170BQ9Y4F5 1589 aaPredicted RBP26.26■■□□□ 1.79
SMIM11A-202ENST00000399295 ZNF142P52746 1687 aaPredicted RBP26.25■■□□□ 1.79
SMIM11A-202ENST00000399295 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
SMIM11A-202ENST00000399295 NLRP1Q9C000 1473 aa26.24■■□□□ 1.79
SMIM11A-202ENST00000399295 EFCAB6Q5THR3 1501 aa26.23■■□□□ 1.79
SMIM11A-202ENST00000399295 GCC2Q8IWJ2 1684 aa26.2■■□□□ 1.78
SMIM11A-202ENST00000399295 PLA2R1Q13018 1463 aa26.2■■□□□ 1.78
SMIM11A-202ENST00000399295 CFAP65Q6ZU64 1925 aaKnown RBP26.2■■□□□ 1.78
SMIM11A-202ENST00000399295 PKD2Q13563 968 aa26.19■■□□□ 1.78
SMIM11A-202ENST00000399295 PTPRTO14522 1441 aa26.18■■□□□ 1.78
SMIM11A-202ENST00000399295 THEMISQ8N1K5 641 aaPredicted RBP26.18■■□□□ 1.78
SMIM11A-202ENST00000399295 TET3O43151 1660 aa26.18■■□□□ 1.78
SMIM11A-202ENST00000399295 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
SMIM11A-202ENST00000399295 IQGAP3Q86VI3 1631 aa26.17■■□□□ 1.78
SMIM11A-202ENST00000399295 RPRD2Q5VT52 1461 aaKnown RBP26.17■■□□□ 1.78
SMIM11A-202ENST00000399295 NOS1P29475 1434 aa26.15■■□□□ 1.78
SMIM11A-202ENST00000399295 TRIM52Q96A61 297 aa26.15■■□□□ 1.78
SMIM11A-202ENST00000399295 UGGT1Q9NYU2 1555 aa26.14■■□□□ 1.78
SMIM11A-202ENST00000399295 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
SMIM11A-202ENST00000399295 IDI1Q13907 227 aa26.11■■□□□ 1.77
SMIM11A-202ENST00000399295 SLC52A1Q9NWF4 448 aa26.11■■□□□ 1.77
SMIM11A-202ENST00000399295 STAG3Q9UJ98 1225 aa26.09■■□□□ 1.77
SMIM11A-202ENST00000399295 SYNMO15061 1565 aa26.08■■□□□ 1.77
SMIM11A-202ENST00000399295 E9PCH4 1651 aa26.07■■□□□ 1.76
SMIM11A-202ENST00000399295 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
SMIM11A-202ENST00000399295 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
SMIM11A-202ENST00000399295 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
SMIM11A-202ENST00000399295 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
SMIM11A-202ENST00000399295 PIK3C2BO00750 1634 aa26.03■■□□□ 1.76
SMIM11A-202ENST00000399295 UBR1Q8IWV7 1749 aa26.02■■□□□ 1.76
SMIM11A-202ENST00000399295 ACIN1Q9UKV3 1341 aaKnown RBP26■■□□□ 1.75
SMIM11A-202ENST00000399295 KDM5AP29375 1690 aaKnown RBP25.99■■□□□ 1.75
SMIM11A-202ENST00000399295 RAB3GAP2Q9H2M9 1393 aa25.96■■□□□ 1.75
SMIM11A-202ENST00000399295 TXNDC2Q86VQ3 553 aa25.96■■□□□ 1.75
SMIM11A-202ENST00000399295 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
SMIM11A-202ENST00000399295 TMEM2Q9UHN6 1383 aa25.95■■□□□ 1.75
SMIM11A-202ENST00000399295 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
SMIM11A-202ENST00000399295 CHGAP10645 457 aaKnown RBP25.95■■□□□ 1.74
SMIM11A-202ENST00000399295 ARHGAP23Q9P227 1491 aa25.95■■□□□ 1.74
SMIM11A-202ENST00000399295 ADGRB3O60242 1522 aa25.94■■□□□ 1.74
SMIM11A-202ENST00000399295 SLIT1O75093 1534 aa25.94■■□□□ 1.74
SMIM11A-202ENST00000399295 MED14O60244 1454 aa25.94■■□□□ 1.74
SMIM11A-202ENST00000399295 LTKP29376 864 aa25.94■■□□□ 1.74
SMIM11A-202ENST00000399295 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
SMIM11A-202ENST00000399295 CERKQ8TCT0 537 aa25.93■■□□□ 1.74
SMIM11A-202ENST00000399295 NEURL4Q96JN8 1562 aa25.93■■□□□ 1.74
SMIM11A-202ENST00000399295 NPHP4O75161 1426 aaPredicted RBP25.92■■□□□ 1.74
SMIM11A-202ENST00000399295 SCAF11Q99590 1463 aaKnown RBP25.91■■□□□ 1.74
SMIM11A-202ENST00000399295 FBXO41Q8TF61 875 aa25.91■■□□□ 1.74
SMIM11A-202ENST00000399295 SPHKAPQ2M3C7 1700 aa25.89■■□□□ 1.74
SMIM11A-202ENST00000399295 FOXD1Q16676 465 aa25.88■■□□□ 1.73
SMIM11A-202ENST00000399295 HRCP23327 699 aa25.87■■□□□ 1.73
SMIM11A-202ENST00000399295 HDGFP51858 240 aaKnown RBP25.87■■□□□ 1.73
SMIM11A-202ENST00000399295 TMEM131LA2VDJ0 1609 aa25.87■■□□□ 1.73
SMIM11A-202ENST00000399295 TRPM2O94759 1503 aa25.86■■□□□ 1.73
SMIM11A-202ENST00000399295 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms