RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FAM135AQ9P2D6 1515 aa39.2■■■■□ 3.87
U2AF1-203ENST00000398137 CROCC2H7BZ55 1655 aa39.19■■■■□ 3.86
U2AF1-203ENST00000398137 RNF17Q9BXT8 1623 aaKnown RBP39.19■■■■□ 3.86
U2AF1-203ENST00000398137 CAMSAP1Q5T5Y3 1602 aa39.18■■■■□ 3.86
U2AF1-203ENST00000398137 ABCC5O15440 1437 aa39.18■■■■□ 3.86
U2AF1-203ENST00000398137 FGD6Q6ZV73 1430 aa39.18■■■■□ 3.86
U2AF1-203ENST00000398137 CEP170BQ9Y4F5 1589 aaPredicted RBP39.17■■■■□ 3.86
U2AF1-203ENST00000398137 TCOF1Q13428 1488 aaKnown RBP39.16■■■■□ 3.86
U2AF1-203ENST00000398137 PTPRTO14522 1441 aa39.15■■■■□ 3.86
U2AF1-203ENST00000398137 DMRT2Q9Y5R5 561 aa39.15■■■■□ 3.86
U2AF1-203ENST00000398137 EIF2AK4Q9P2K8 1649 aaKnown RBP39.14■■■■□ 3.86
U2AF1-203ENST00000398137 MROH1Q8NDA8 1641 aa39.13■■■■□ 3.85
U2AF1-203ENST00000398137 PZPP20742 1482 aa39.12■■■■□ 3.85
U2AF1-203ENST00000398137 FBXO31Q5XUX0 539 aaPredicted RBP39.12■■■■□ 3.85
U2AF1-203ENST00000398137 SHANK2Q9UPX8 1470 aa39.11■■■■□ 3.85
U2AF1-203ENST00000398137 DNMT1P26358 1616 aaKnown RBP39.11■■■■□ 3.85
U2AF1-203ENST00000398137 CERKQ8TCT0 537 aa39.1■■■■□ 3.85
U2AF1-203ENST00000398137 WASHC2CQ9Y4E1 1318 aa39.1■■■■□ 3.85
U2AF1-203ENST00000398137 DAPK1P53355 1430 aa39.08■■■■□ 3.85
U2AF1-203ENST00000398137 DUOX2Q9NRD8 1548 aa39.07■■■■□ 3.84
U2AF1-203ENST00000398137 ABCC3O15438 1527 aa39.05■■■■□ 3.84
U2AF1-203ENST00000398137 A2ML1A8K2U0 1454 aa39.04■■■■□ 3.84
U2AF1-203ENST00000398137 PLA2R1Q13018 1463 aa39.04■■■■□ 3.84
U2AF1-203ENST00000398137 TNRQ92752 1358 aa39.02■■■■□ 3.84
U2AF1-203ENST00000398137 ZC3H13Q5T200 1668 aaKnown RBP39.01■■■■□ 3.84
U2AF1-203ENST00000398137 KIF15Q9NS87 1388 aa39.01■■■■□ 3.84
U2AF1-203ENST00000398137 NCKAP5LQ9HCH0 1330 aa39.01■■■■□ 3.84
U2AF1-203ENST00000398137 CEP152O94986 1710 aa38.97■■■■□ 3.83
U2AF1-203ENST00000398137 LTBP4Q8N2S1 1624 aa38.96■■■■□ 3.83
U2AF1-203ENST00000398137 RRP7BPQ9NSQ0 103 aa38.96■■■■□ 3.83
U2AF1-203ENST00000398137 FAM50AQ14320 339 aaKnown RBP38.93■■■■□ 3.82
U2AF1-203ENST00000398137 ERBINQ96RT1 1412 aa38.93■■■■□ 3.82
U2AF1-203ENST00000398137 PRDM15P57071 1507 aaPredicted RBP38.91■■■■□ 3.82
U2AF1-203ENST00000398137 SPATA31D1Q6ZQQ2 1576 aa38.9■■■■□ 3.82
U2AF1-203ENST00000398137 PKD2Q13563 968 aa38.89■■■■□ 3.82
U2AF1-203ENST00000398137 DEPDC5O75140 1603 aa38.89■■■■□ 3.82
U2AF1-203ENST00000398137 CHIC2Q9UKJ5 165 aa38.87■■■■□ 3.81
U2AF1-203ENST00000398137 RRBP1Q9P2E9 1410 aaKnown RBP38.87■■■■□ 3.81
U2AF1-203ENST00000398137 NLRP1Q9C000 1473 aa38.86■■■■□ 3.81
U2AF1-203ENST00000398137 ERVK-7P63135 1459 aa38.85■■■■□ 3.81
U2AF1-203ENST00000398137 NEURL4Q96JN8 1562 aa38.82■■■■□ 3.81
U2AF1-203ENST00000398137 ADGRL2O95490 1459 aa38.82■■■■□ 3.81
U2AF1-203ENST00000398137 ANKRD30AQ9BXX3 1397 aa38.82■■■■□ 3.8
U2AF1-203ENST00000398137 CFAP65Q6ZU64 1925 aaKnown RBP38.81■■■■□ 3.8
U2AF1-203ENST00000398137 POLR1AO95602 1720 aaPredicted RBP38.81■■■■□ 3.8
U2AF1-203ENST00000398137 UGGT1Q9NYU2 1555 aa38.78■■■■□ 3.8
U2AF1-203ENST00000398137 ZNF335Q9H4Z2 1342 aaPredicted RBP38.77■■■■□ 3.8
U2AF1-203ENST00000398137 ARHGAP31Q2M1Z3 1444 aa38.75■■■■□ 3.79
U2AF1-203ENST00000398137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.75■■■■□ 3.791e-7■■■■■ 38.4
U2AF1-203ENST00000398137 VWDEQ8N2E2 1590 aa38.74■■■■□ 3.79
U2AF1-203ENST00000398137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.71■■■■□ 3.79
U2AF1-203ENST00000398137 THEMISQ8N1K5 641 aaPredicted RBP38.69■■■■□ 3.78
U2AF1-203ENST00000398137 LMTK2Q8IWU2 1503 aa38.68■■■■□ 3.78
U2AF1-203ENST00000398137 IQSEC2Q5JU85 1478 aa38.66■■■■□ 3.78
U2AF1-203ENST00000398137 UBR1Q8IWV7 1749 aa38.66■■■■□ 3.78
U2AF1-203ENST00000398137 ITGAEP38570 1179 aa38.64■■■■□ 3.78
U2AF1-203ENST00000398137 MED14O60244 1454 aa38.62■■■■□ 3.77
U2AF1-203ENST00000398137 ANKLE2Q86XL3 938 aa38.61■■■■□ 3.77
U2AF1-203ENST00000398137 KANK1Q14678 1352 aa38.6■■■■□ 3.77
U2AF1-203ENST00000398137 ANKRD50Q9ULJ7 1429 aa38.59■■■■□ 3.77
U2AF1-203ENST00000398137 NPHP4O75161 1426 aaPredicted RBP38.55■■■■□ 3.76
U2AF1-203ENST00000398137 EFCAB6Q5THR3 1501 aa38.55■■■■□ 3.76
U2AF1-203ENST00000398137 IQGAP1P46940 1657 aa38.53■■■■□ 3.76
U2AF1-203ENST00000398137 PIK3C2BO00750 1634 aa38.52■■■■□ 3.76
U2AF1-203ENST00000398137 SYNMO15061 1565 aa38.52■■■■□ 3.76
U2AF1-203ENST00000398137 ARHGAP23Q9P227 1491 aa38.5■■■■□ 3.75
U2AF1-203ENST00000398137 SLIT1O75093 1534 aa38.48■■■■□ 3.75
U2AF1-203ENST00000398137 NOS1P29475 1434 aa38.47■■■■□ 3.75
U2AF1-203ENST00000398137 ROCK1Q13464 1354 aa38.47■■■■□ 3.75
U2AF1-203ENST00000398137 UNC13BO14795 1591 aa38.45■■■■□ 3.75
U2AF1-203ENST00000398137 LTKP29376 864 aa38.42■■■■□ 3.74
U2AF1-203ENST00000398137 CPS1P31327 1500 aa38.42■■■■□ 3.74
U2AF1-203ENST00000398137 STRCP1A6NGW2 1772 aa38.42■■■■□ 3.74
U2AF1-203ENST00000398137 SCAF11Q99590 1463 aaKnown RBP38.41■■■■□ 3.74
U2AF1-203ENST00000398137 IDI1Q13907 227 aa38.41■■■■□ 3.74
U2AF1-203ENST00000398137 KDM5AP29375 1690 aaKnown RBP38.41■■■■□ 3.74
U2AF1-203ENST00000398137 TET3O43151 1660 aa38.4■■■■□ 3.74
U2AF1-203ENST00000398137 RPRD2Q5VT52 1461 aaKnown RBP38.36■■■■□ 3.73
U2AF1-203ENST00000398137 TMEM2Q9UHN6 1383 aa38.34■■■■□ 3.73
U2AF1-203ENST00000398137 GCC2Q8IWJ2 1684 aa38.34■■■■□ 3.73
U2AF1-203ENST00000398137 TXNDC2Q86VQ3 553 aa38.33■■■■□ 3.73
U2AF1-203ENST00000398137 UBAP1LF5GYI3 381 aa38.31■■■■□ 3.72
U2AF1-203ENST00000398137 ADGRB3O60242 1522 aa38.29■■■■□ 3.72
U2AF1-203ENST00000398137 IQGAP3Q86VI3 1631 aa38.29■■■■□ 3.72
U2AF1-203ENST00000398137 E9PCH4 1651 aa38.29■■■■□ 3.72
U2AF1-203ENST00000398137 SLC52A1Q9NWF4 448 aa38.24■■■■□ 3.71
U2AF1-203ENST00000398137 STAG3Q9UJ98 1225 aa38.23■■■■□ 3.71
U2AF1-203ENST00000398137 MYO5BQ9ULV0 1848 aa38.23■■■■□ 3.71
U2AF1-203ENST00000398137 ALKQ9UM73 1620 aa38.23■■■■□ 3.71
U2AF1-203ENST00000398137 HFM1A2PYH4 1435 aa38.22■■■■□ 3.71
U2AF1-203ENST00000398137 NAIPQ13075 1403 aa38.22■■■■□ 3.71
U2AF1-203ENST00000398137 LRRC7Q96NW7 1537 aa38.22■■■■□ 3.71
U2AF1-203ENST00000398137 EID1Q9Y6B2 187 aa38.21■■■■□ 3.71
U2AF1-203ENST00000398137 TMEM131LA2VDJ0 1609 aa38.16■■■■□ 3.7
U2AF1-203ENST00000398137 NUP155O75694 1391 aa38.16■■■■□ 3.7
U2AF1-203ENST00000398137 ZFYVE9O95405 1425 aa38.12■■■■□ 3.69
U2AF1-203ENST00000398137 XIRP1Q702N8 1843 aaKnown RBP38.1■■■■□ 3.69
U2AF1-203ENST00000398137 TOM1O60784 492 aa38.06■■■■□ 3.68
U2AF1-203ENST00000398137 TRIM26Q12899 539 aaPredicted RBP38.06■■■■□ 3.68
U2AF1-203ENST00000398137 PIP4K2BP78356 416 aa38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms