RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 TRAK2O60296 914 aa3.47□□□□□ -1.85
HMGN2P39-201ENST00000398005 PDE4AP27815 886 aa3.47□□□□□ -1.85
HMGN2P39-201ENST00000398005 FBXO22Q8NEZ5 403 aa3.47□□□□□ -1.85
HMGN2P39-201ENST00000398005 DDRGK1Q96HY6 314 aa3.47□□□□□ -1.85
HMGN2P39-201ENST00000398005 A6NJR5 290 aa3.46□□□□□ -1.86
HMGN2P39-201ENST00000398005 KIF3CO14782 793 aa3.46□□□□□ -1.86
HMGN2P39-201ENST00000398005 MLLT3P42568 568 aaPredicted RBP3.46□□□□□ -1.86
HMGN2P39-201ENST00000398005 NLRP6P59044 892 aa3.46□□□□□ -1.86
HMGN2P39-201ENST00000398005 CLUAP1Q96AJ1 413 aa3.46□□□□□ -1.86
HMGN2P39-201ENST00000398005 NCKAP5LQ9HCH0 1330 aa3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 POTEEQ6S8J3 1075 aa3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 ANKRD13DQ6ZTN6 518 aa3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 CCDC97Q96F63 343 aaPredicted RBP3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 DDX27Q96GQ7 796 aaKnown RBP3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 TRAIPQ9BWF2 469 aa3.45□□□□□ -1.86
HMGN2P39-201ENST00000398005 PLEKHG3A1L390 1219 aa3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 PTGER2P43116 358 aa3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 LSM11P83369 360 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 TMCO4Q5TGY1 634 aa3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 ZNF777Q9ULD5 760 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 ARIH1Q9Y4X5 557 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P39-201ENST00000398005 LOC105371045A0A1W2PR82 267 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 C2orf72A6NCS6 295 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 NUDT7P0C024 238 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 RBM25P49756 843 aaKnown RBP3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 MFSD10Q14728 455 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 PCMTD1Q96MG8 357 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 SERPINA10Q9UK55 444 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 LHX6Q9UPM6 363 aa3.43□□□□□ -1.86
HMGN2P39-201ENST00000398005 SHROOM4Q9ULL8 1493 aa3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 ONECUT3O60422 494 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 TTLL12Q14166 644 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 PROSER2Q86WR7 435 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 RGS22Q8NE09 1264 aa3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 GZF1Q9H116 711 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 ATP1B4Q9UN42 357 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 MTMR7Q9Y216 660 aa3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 AXIN2Q9Y2T1 843 aa3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 MINK1Q8N4C8 1332 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P39-201ENST00000398005 SLC34A2O95436 690 aa3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 CAMK2BQ13554 666 aa3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 FOXD4L5Q5VV16 416 aaPredicted RBP3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 PARP9Q8IXQ6 854 aa3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 FOXD4L4Q8WXT5 416 aaPredicted RBP3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 CCDC102AQ96A19 550 aa3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 PCDHGA4Q9Y5G9 962 aa3.41□□□□□ -1.86
HMGN2P39-201ENST00000398005 NUTM2FA1L443 756 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 IGSF3O75054 1194 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 MFAP1P55081 439 aaKnown RBP3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 MAP2K5Q13163 448 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 MCM6Q14566 821 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 RETREG2Q8NC44 543 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 CRISPLD2Q9H0B8 497 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 GOPCQ9HD26 462 aa3.4□□□□□ -1.87
HMGN2P39-201ENST00000398005 KDM4FA0A1W2PPD8 638 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 DPYSL4O14531 572 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 IRF6O14896 467 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 PBX2P40425 430 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 AMHR2Q16671 573 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 FBXW7Q969H0 707 aa3.39□□□□□ -1.87
HMGN2P39-201ENST00000398005 SPDYE16A6NNV3 312 aaPredicted RBP3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 PPP1R15BQ5SWA1 713 aa3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 ADGRD1Q6QNK2 874 aa3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 ZNF428Q96B54 188 aa3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 POM121Q96HA1 1249 aa3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 PLA2G2EQ9NZK7 142 aa3.38□□□□□ -1.87
HMGN2P39-201ENST00000398005 GRXCR2A6NFK2 248 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 E9PSI1 815 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 ARHGAP33O14559 1287 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 GPR37O15354 613 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 HRO43593 1189 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 IRF5Q13568 498 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 DMRTA1Q5VZB9 504 aa3.37□□□□□ -1.87
HMGN2P39-201ENST00000398005 GNPATO15228 680 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 HMGB1P09429 215 aaKnown RBP3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 PSEN2P49810 448 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 PDE4CQ08493 712 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 PDIA6Q15084 440 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 GIGYF2Q6Y7W6 1299 aaKnown RBP3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 FNBP4Q8N3X1 1017 aaPredicted RBP3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 TMC2Q8TDI7 906 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 PTCD2Q8WV60 388 aaKnown RBP3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 HCSTQ9UBK5 93 aa3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 ACIN1Q9UKV3 1341 aaKnown RBP3.36□□□□□ -1.87
HMGN2P39-201ENST00000398005 PATL2C9JE40 543 aaKnown RBP3.35□□□□□ -1.87
HMGN2P39-201ENST00000398005 FCHSD2O94868 740 aa3.35□□□□□ -1.87
HMGN2P39-201ENST00000398005 MS4A1P11836 297 aa3.35□□□□□ -1.87
HMGN2P39-201ENST00000398005 SH3D19Q5HYK7 790 aa3.35□□□□□ -1.87
HMGN2P39-201ENST00000398005 ZNF330Q9Y3S2 320 aaPredicted RBP3.35□□□□□ -1.87
HMGN2P39-201ENST00000398005 PSDA5PKW4 1024 aaPredicted RBP3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 TK2O00142 265 aa3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 CDK11BP21127 795 aaKnown RBP3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 FECHP22830 423 aa3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 FOXK1P85037 733 aa3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 HIC1Q14526 733 aa3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 EMILIN3Q9NT22 766 aa3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 CDK11AQ9UQ88 783 aaPredicted RBP3.34□□□□□ -1.87
HMGN2P39-201ENST00000398005 PPP1R15AO75807 674 aaPredicted RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 HSP90B1P14625 803 aaKnown RBP3.33□□□□□ -1.88
HMGN2P39-201ENST00000398005 DSG2Q14126 1118 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms